RNA–Protein interactions for RNA: ENST00000336455.9

ZFYVE19-202, Transcript of zinc finger FYVE-type containing 19, humanhuman

TSL 2 BASIC

Gene ZFYVE19, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE19-202ENST00000336455 NISCHQ9Y2I1 1504 aa30.77■■■□□ 2.52
ZFYVE19-202ENST00000336455 CCDC180Q9P1Z9 1646 aa26.73■■□□□ 1.87
ZFYVE19-202ENST00000336455 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.73
ZFYVE19-202ENST00000336455 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
ZFYVE19-202ENST00000336455 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
ZFYVE19-202ENST00000336455 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
ZFYVE19-202ENST00000336455 ABCC9O60706 1549 aa25.18■■□□□ 1.62
ZFYVE19-202ENST00000336455 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
ZFYVE19-202ENST00000336455 NACADO15069 1562 aa24.84■■□□□ 1.57
ZFYVE19-202ENST00000336455 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
ZFYVE19-202ENST00000336455 RB1CC1Q8TDY2 1594 aa24.6■■□□□ 1.53
ZFYVE19-202ENST00000336455 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
ZFYVE19-202ENST00000336455 UNC13AQ9UPW8 1703 aa24.2■■□□□ 1.46
ZFYVE19-202ENST00000336455 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
ZFYVE19-202ENST00000336455 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
ZFYVE19-202ENST00000336455 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
ZFYVE19-202ENST00000336455 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
ZFYVE19-202ENST00000336455 PABPN1Q86U42 306 aaKnown RBP eCLIP23.78■■□□□ 1.4
ZFYVE19-202ENST00000336455 BAZ1AQ9NRL2 1556 aaPredicted RBP23.72■■□□□ 1.39
ZFYVE19-202ENST00000336455 WIZO95785 1651 aa23.64■■□□□ 1.38
ZFYVE19-202ENST00000336455 SMARCA4P51532 1647 aa23.63■■□□□ 1.37
ZFYVE19-202ENST00000336455 CHIC1Q5VXU3 224 aa23.41■■□□□ 1.34
ZFYVE19-202ENST00000336455 TOP2AP11388 1531 aaKnown RBP23.36■■□□□ 1.33
ZFYVE19-202ENST00000336455 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
ZFYVE19-202ENST00000336455 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
ZFYVE19-202ENST00000336455 SMARCA2P51531 1590 aa23.17■■□□□ 1.3
ZFYVE19-202ENST00000336455 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
ZFYVE19-202ENST00000336455 CCDC88BA6NC98 1476 aa23.14■■□□□ 1.29
ZFYVE19-202ENST00000336455 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
ZFYVE19-202ENST00000336455 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
ZFYVE19-202ENST00000336455 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
ZFYVE19-202ENST00000336455 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
ZFYVE19-202ENST00000336455 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
ZFYVE19-202ENST00000336455 ABCC8Q09428 1581 aa22.74■■□□□ 1.23
ZFYVE19-202ENST00000336455 LOC105371045A0A1W2PR82 267 aa22.55■■□□□ 1.2
ZFYVE19-202ENST00000336455 WRNQ14191 1432 aaPredicted RBP eCLIP22.51■■□□□ 1.19
ZFYVE19-202ENST00000336455 FAM9AQ8IZU1 332 aaPredicted RBP22.5■■□□□ 1.19
ZFYVE19-202ENST00000336455 CFTRP13569 1480 aa22.48■■□□□ 1.19
ZFYVE19-202ENST00000336455 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
ZFYVE19-202ENST00000336455 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
ZFYVE19-202ENST00000336455 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
ZFYVE19-202ENST00000336455 SOGA1O94964 1423 aa22.33■■□□□ 1.16
ZFYVE19-202ENST00000336455 TOP2BQ02880 1626 aa22.32■■□□□ 1.16
ZFYVE19-202ENST00000336455 BIVM-ERCC5R4GMW8 1640 aa22.31■■□□□ 1.16
ZFYVE19-202ENST00000336455 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
ZFYVE19-202ENST00000336455 CUX1P39880 1505 aa22.26■■□□□ 1.15
ZFYVE19-202ENST00000336455 EEA1Q15075 1411 aa22.23■■□□□ 1.15
ZFYVE19-202ENST00000336455 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
ZFYVE19-202ENST00000336455 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
ZFYVE19-202ENST00000336455 NESP48681 1621 aa22.18■■□□□ 1.14
ZFYVE19-202ENST00000336455 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
ZFYVE19-202ENST00000336455 LAMC3Q9Y6N6 1575 aa22.13■■□□□ 1.13
ZFYVE19-202ENST00000336455 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
ZFYVE19-202ENST00000336455 KIF21BO75037 1637 aa22■■□□□ 1.11
ZFYVE19-202ENST00000336455 GOLGA3Q08378 1498 aa21.98■■□□□ 1.11
ZFYVE19-202ENST00000336455 DNMBPQ6XZF7 1577 aa21.97■■□□□ 1.11
ZFYVE19-202ENST00000336455 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
ZFYVE19-202ENST00000336455 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
ZFYVE19-202ENST00000336455 TNIKQ9UKE5 1360 aa21.93■■□□□ 1.1
ZFYVE19-202ENST00000336455 TOPBP1Q92547 1522 aa21.93■■□□□ 1.1
ZFYVE19-202ENST00000336455 PDS5BQ9NTI5 1447 aa21.92■■□□□ 1.1
ZFYVE19-202ENST00000336455 KIF21AQ7Z4S6 1674 aa21.91■■□□□ 1.1
ZFYVE19-202ENST00000336455 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
ZFYVE19-202ENST00000336455 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
ZFYVE19-202ENST00000336455 RAPGEF2Q9Y4G8 1499 aa21.86■■□□□ 1.09
ZFYVE19-202ENST00000336455 UBTFP17480 764 aaKnown RBP21.86■■□□□ 1.09
ZFYVE19-202ENST00000336455 CEP162Q5TB80 1403 aa21.86■■□□□ 1.09
ZFYVE19-202ENST00000336455 CUX2O14529 1486 aa21.85■■□□□ 1.09
ZFYVE19-202ENST00000336455 POLA1P09884 1462 aaPredicted RBP21.83■■□□□ 1.09
ZFYVE19-202ENST00000336455 PRXQ9BXM0 1461 aa21.83■■□□□ 1.09
ZFYVE19-202ENST00000336455 ERICH3Q5RHP9 1530 aa21.79■■□□□ 1.08
ZFYVE19-202ENST00000336455 RAD54L2Q9Y4B4 1467 aa21.79■■□□□ 1.08
ZFYVE19-202ENST00000336455 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
ZFYVE19-202ENST00000336455 IGF1RP08069 1367 aa21.72■■□□□ 1.07
ZFYVE19-202ENST00000336455 WDR97A6NE52 1622 aa21.72■■□□□ 1.07
ZFYVE19-202ENST00000336455 MRC2Q9UBG0 1479 aa21.68■■□□□ 1.06
ZFYVE19-202ENST00000336455 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
ZFYVE19-202ENST00000336455 CLIP1P30622 1438 aa21.63■■□□□ 1.05
ZFYVE19-202ENST00000336455 CARMIL1Q5VZK9 1371 aa21.6■■□□□ 1.05
ZFYVE19-202ENST00000336455 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
ZFYVE19-202ENST00000336455 ABCA5Q8WWZ7 1642 aa21.6■■□□□ 1.05
ZFYVE19-202ENST00000336455 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.04
ZFYVE19-202ENST00000336455 WDR62O43379 1518 aa21.56■■□□□ 1.04
ZFYVE19-202ENST00000336455 TDRD9Q8NDG6 1382 aaKnown RBP21.54■■□□□ 1.04
ZFYVE19-202ENST00000336455 CUL7Q14999 1698 aa21.54■■□□□ 1.04
ZFYVE19-202ENST00000336455 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
ZFYVE19-202ENST00000336455 RANGAP1P46060 587 aaPredicted RBP21.51■■□□□ 1.03
ZFYVE19-202ENST00000336455 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
ZFYVE19-202ENST00000336455 PPARGC1BQ86YN6 1023 aaKnown RBP21.51■■□□□ 1.03
ZFYVE19-202ENST00000336455 THOC2Q8NI27 1593 aaKnown RBP21.49■■□□□ 1.03
ZFYVE19-202ENST00000336455 VPS8Q8N3P4 1428 aa21.47■■□□□ 1.03
ZFYVE19-202ENST00000336455 ARAP1Q96P48 1450 aa21.45■■□□□ 1.02
ZFYVE19-202ENST00000336455 PBRM1Q86U86 1689 aa21.42■■□□□ 1.02
ZFYVE19-202ENST00000336455 IFT140Q96RY7 1462 aa21.42■■□□□ 1.02
ZFYVE19-202ENST00000336455 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.01
ZFYVE19-202ENST00000336455 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.011e-6■■■■■ 34.3
ZFYVE19-202ENST00000336455 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
ZFYVE19-202ENST00000336455 CTTNBP2Q8WZ74 1663 aa21.36■■□□□ 1.01
ZFYVE19-202ENST00000336455 GRIN2BQ13224 1484 aa21.3■■□□□ 1
ZFYVE19-202ENST00000336455 TTBK1Q5TCY1 1321 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms