RNA–Protein interactions for RNA: ENST00000395938.6

PMP22-203, Transcript of peripheral myelin protein 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMP22, Length 1,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-203ENST00000395938 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
PMP22-203ENST00000395938 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
PMP22-203ENST00000395938 ABCC9O60706 1549 aa25.49■■□□□ 1.67
PMP22-203ENST00000395938 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
PMP22-203ENST00000395938 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
PMP22-203ENST00000395938 DCAF1Q9Y4B6 1507 aa25.03■■□□□ 1.6
PMP22-203ENST00000395938 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
PMP22-203ENST00000395938 NACADO15069 1562 aa24.86■■□□□ 1.57
PMP22-203ENST00000395938 RB1CC1Q8TDY2 1594 aa24.72■■□□□ 1.55
PMP22-203ENST00000395938 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
PMP22-203ENST00000395938 SCRIBQ14160 1630 aa24.33■■□□□ 1.49
PMP22-203ENST00000395938 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
PMP22-203ENST00000395938 PABPN1Q86U42 306 aaKnown RBP eCLIP24.03■■□□□ 1.44
PMP22-203ENST00000395938 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
PMP22-203ENST00000395938 CECR2Q9BXF3 1484 aa23.55■■□□□ 1.36
PMP22-203ENST00000395938 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
PMP22-203ENST00000395938 BAZ1AQ9NRL2 1556 aaPredicted RBP23.4■■□□□ 1.34
PMP22-203ENST00000395938 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
PMP22-203ENST00000395938 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
PMP22-203ENST00000395938 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
PMP22-203ENST00000395938 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
PMP22-203ENST00000395938 WIZO95785 1651 aa23.1■■□□□ 1.29
PMP22-203ENST00000395938 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
PMP22-203ENST00000395938 SMARCA2P51531 1590 aa23.05■■□□□ 1.28
PMP22-203ENST00000395938 PEG3Q9GZU2 1588 aa23.04■■□□□ 1.28
PMP22-203ENST00000395938 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
PMP22-203ENST00000395938 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
PMP22-203ENST00000395938 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
PMP22-203ENST00000395938 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.26
PMP22-203ENST00000395938 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
PMP22-203ENST00000395938 HMGXB3Q12766 1538 aa22.84■■□□□ 1.25
PMP22-203ENST00000395938 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
PMP22-203ENST00000395938 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.17
PMP22-203ENST00000395938 CFTRP13569 1480 aa22.34■■□□□ 1.17
PMP22-203ENST00000395938 NESP48681 1621 aa22.22■■□□□ 1.15
PMP22-203ENST00000395938 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.15
PMP22-203ENST00000395938 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
PMP22-203ENST00000395938 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
PMP22-203ENST00000395938 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
PMP22-203ENST00000395938 TRIM41Q8WV44 630 aa22.08■■□□□ 1.12
PMP22-203ENST00000395938 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
PMP22-203ENST00000395938 ABCC8Q09428 1581 aa22.02■■□□□ 1.12
PMP22-203ENST00000395938 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.11
PMP22-203ENST00000395938 CEP164Q9UPV0 1460 aa21.99■■□□□ 1.11
PMP22-203ENST00000395938 ERCC6Q03468 1493 aa21.93■■□□□ 1.1
PMP22-203ENST00000395938 KIF21AQ7Z4S6 1674 aa21.87■■□□□ 1.09
PMP22-203ENST00000395938 CUX1P39880 1505 aa21.85■■□□□ 1.09
PMP22-203ENST00000395938 SYNJ1O43426 1573 aa21.84■■□□□ 1.09
PMP22-203ENST00000395938 MRC2Q9UBG0 1479 aa21.81■■□□□ 1.08
PMP22-203ENST00000395938 TOP2BQ02880 1626 aa21.81■■□□□ 1.08
PMP22-203ENST00000395938 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
PMP22-203ENST00000395938 TOPBP1Q92547 1522 aa21.79■■□□□ 1.08
PMP22-203ENST00000395938 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
PMP22-203ENST00000395938 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
PMP22-203ENST00000395938 FGD5Q6ZNL6 1462 aa21.7■■□□□ 1.06
PMP22-203ENST00000395938 WDR62O43379 1518 aa21.67■■□□□ 1.06
PMP22-203ENST00000395938 SOGA1O94964 1423 aa21.65■■□□□ 1.06
PMP22-203ENST00000395938 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
PMP22-203ENST00000395938 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.05
PMP22-203ENST00000395938 THOC2Q8NI27 1593 aaKnown RBP21.63■■□□□ 1.05
PMP22-203ENST00000395938 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
PMP22-203ENST00000395938 CUX2O14529 1486 aa21.53■■□□□ 1.04
PMP22-203ENST00000395938 EEA1Q15075 1411 aa21.53■■□□□ 1.04
PMP22-203ENST00000395938 KIF27Q86VH2 1401 aa21.52■■□□□ 1.04
PMP22-203ENST00000395938 RUSC2Q8N2Y8 1516 aa21.51■■□□□ 1.03
PMP22-203ENST00000395938 IFT140Q96RY7 1462 aa21.51■■□□□ 1.03
PMP22-203ENST00000395938 ABCA10Q8WWZ4 1543 aa21.51■■□□□ 1.03
PMP22-203ENST00000395938 CSRNP3Q8WYN3 585 aa21.5■■□□□ 1.03
PMP22-203ENST00000395938 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
PMP22-203ENST00000395938 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
PMP22-203ENST00000395938 IGF1RP08069 1367 aa21.38■■□□□ 1.01
PMP22-203ENST00000395938 GAPVD1Q14C86 1478 aa21.37■■□□□ 1.01
PMP22-203ENST00000395938 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.01
PMP22-203ENST00000395938 ZNF608Q9ULD9 1512 aaPredicted RBP21.35■■□□□ 1.01
PMP22-203ENST00000395938 WDR97A6NE52 1622 aa21.35■■□□□ 1.01
PMP22-203ENST00000395938 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
PMP22-203ENST00000395938 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
PMP22-203ENST00000395938 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
PMP22-203ENST00000395938 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
PMP22-203ENST00000395938 GRIN2BQ13224 1484 aa21.27■■□□□ 1
PMP22-203ENST00000395938 ERICH3Q5RHP9 1530 aa21.25■□□□□ 0.99
PMP22-203ENST00000395938 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
PMP22-203ENST00000395938 UBTFP17480 764 aaKnown RBP21.22■□□□□ 0.99
PMP22-203ENST00000395938 EIF4G3O43432 1585 aaKnown RBP21.21■□□□□ 0.99
PMP22-203ENST00000395938 GOLGA3Q08378 1498 aa21.18■□□□□ 0.98
PMP22-203ENST00000395938 RAPGEF2Q9Y4G8 1499 aa21.17■□□□□ 0.98
PMP22-203ENST00000395938 KIF21BO75037 1637 aa21.16■□□□□ 0.98
PMP22-203ENST00000395938 FHAD1B1AJZ9 1412 aa21.15■□□□□ 0.98
PMP22-203ENST00000395938 PBRM1Q86U86 1689 aa21.14■□□□□ 0.98
PMP22-203ENST00000395938 CUL7Q14999 1698 aa21.14■□□□□ 0.97
PMP22-203ENST00000395938 SNAPC4Q5SXM2 1469 aa21.14■□□□□ 0.97
PMP22-203ENST00000395938 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
PMP22-203ENST00000395938 MAGI1Q96QZ7 1491 aaPredicted RBP21.11■□□□□ 0.97
PMP22-203ENST00000395938 FBLN2P98095 1184 aa21.1■□□□□ 0.97
PMP22-203ENST00000395938 TNIKQ9UKE5 1360 aa21.07■□□□□ 0.96
PMP22-203ENST00000395938 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
PMP22-203ENST00000395938 SYNJ2O15056 1496 aa21.04■□□□□ 0.96
PMP22-203ENST00000395938 GRIN2AQ12879 1464 aa20.97■□□□□ 0.95
PMP22-203ENST00000395938 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
PMP22-203ENST00000395938 CEP162Q5TB80 1403 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms