RNA–Protein interactions for RNA: ENST00000415961.2

MRPS16P3-201, Transcript of mitochondrial ribosomal protein S16 pseudogene 3, humanhuman

BASIC

Gene MRPS16P3, Length 374 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS16P3-201ENST00000415961 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
MRPS16P3-201ENST00000415961 ABCC9O60706 1549 aa27.46■■□□□ 1.99
MRPS16P3-201ENST00000415961 CCDC180Q9P1Z9 1646 aa27.21■■□□□ 1.95
MRPS16P3-201ENST00000415961 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
MRPS16P3-201ENST00000415961 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
MRPS16P3-201ENST00000415961 NACADO15069 1562 aa25.78■■□□□ 1.72
MRPS16P3-201ENST00000415961 DCAF8L2P0C7V8 631 aa25.67■■□□□ 1.7
MRPS16P3-201ENST00000415961 PABPN1Q86U42 306 aaKnown RBP eCLIP25.54■■□□□ 1.68
MRPS16P3-201ENST00000415961 UNC13AQ9UPW8 1703 aa25.44■■□□□ 1.66
MRPS16P3-201ENST00000415961 MYO15BQ96JP2 1530 aa25.33■■□□□ 1.65
MRPS16P3-201ENST00000415961 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
MRPS16P3-201ENST00000415961 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
MRPS16P3-201ENST00000415961 DCAF1Q9Y4B6 1507 aa24.92■■□□□ 1.58
MRPS16P3-201ENST00000415961 SHROOM4Q9ULL8 1493 aa24.89■■□□□ 1.57
MRPS16P3-201ENST00000415961 SCRIBQ14160 1630 aa24.82■■□□□ 1.56
MRPS16P3-201ENST00000415961 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
MRPS16P3-201ENST00000415961 CECR2Q9BXF3 1484 aa24.76■■□□□ 1.55
MRPS16P3-201ENST00000415961 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
MRPS16P3-201ENST00000415961 DNAJC5Q9H3Z4 198 aa24■■□□□ 1.43
MRPS16P3-201ENST00000415961 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
MRPS16P3-201ENST00000415961 CUX2O14529 1486 aa23.75■■□□□ 1.39
MRPS16P3-201ENST00000415961 ERCC6Q03468 1493 aa23.74■■□□□ 1.39
MRPS16P3-201ENST00000415961 ATAD2BQ9ULI0 1458 aa23.71■■□□□ 1.39
MRPS16P3-201ENST00000415961 SMARCA2P51531 1590 aa23.63■■□□□ 1.37
MRPS16P3-201ENST00000415961 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
MRPS16P3-201ENST00000415961 HMGXB3Q12766 1538 aa23.6■■□□□ 1.37
MRPS16P3-201ENST00000415961 NESP48681 1621 aa23.52■■□□□ 1.36
MRPS16P3-201ENST00000415961 BAZ1BQ9UIG0 1483 aaKnown RBP23.48■■□□□ 1.35
MRPS16P3-201ENST00000415961 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
MRPS16P3-201ENST00000415961 PEG3Q9GZU2 1588 aa23.38■■□□□ 1.33
MRPS16P3-201ENST00000415961 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
MRPS16P3-201ENST00000415961 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
MRPS16P3-201ENST00000415961 MROH2BQ7Z745 1585 aa23.29■■□□□ 1.32
MRPS16P3-201ENST00000415961 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
MRPS16P3-201ENST00000415961 PDS5BQ9NTI5 1447 aa23.19■■□□□ 1.3
MRPS16P3-201ENST00000415961 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
MRPS16P3-201ENST00000415961 WIZO95785 1651 aa23.01■■□□□ 1.27
MRPS16P3-201ENST00000415961 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
MRPS16P3-201ENST00000415961 WDR62O43379 1518 aa22.95■■□□□ 1.26
MRPS16P3-201ENST00000415961 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
MRPS16P3-201ENST00000415961 CEP164Q9UPV0 1460 aa22.87■■□□□ 1.25
MRPS16P3-201ENST00000415961 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
MRPS16P3-201ENST00000415961 CFTRP13569 1480 aa22.76■■□□□ 1.23
MRPS16P3-201ENST00000415961 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
MRPS16P3-201ENST00000415961 TOP2AP11388 1531 aaKnown RBP22.69■■□□□ 1.22
MRPS16P3-201ENST00000415961 URB2Q14146 1524 aaKnown RBP22.65■■□□□ 1.22
MRPS16P3-201ENST00000415961 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
MRPS16P3-201ENST00000415961 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
MRPS16P3-201ENST00000415961 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.18
MRPS16P3-201ENST00000415961 IFT140Q96RY7 1462 aa22.42■■□□□ 1.18
MRPS16P3-201ENST00000415961 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
MRPS16P3-201ENST00000415961 RIMBP3CA6NJZ7 1639 aa22.37■■□□□ 1.17
MRPS16P3-201ENST00000415961 RIMBP3BA6NNM3 1639 aa22.37■■□□□ 1.17
MRPS16P3-201ENST00000415961 RIMBP3Q9UFD9 1639 aa22.37■■□□□ 1.17
MRPS16P3-201ENST00000415961 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
MRPS16P3-201ENST00000415961 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
MRPS16P3-201ENST00000415961 EIF4G3O43432 1585 aaKnown RBP22.28■■□□□ 1.16
MRPS16P3-201ENST00000415961 ARHGEF11O15085 1522 aa22.27■■□□□ 1.16
MRPS16P3-201ENST00000415961 DNMBPQ6XZF7 1577 aa22.26■■□□□ 1.15
MRPS16P3-201ENST00000415961 AQRO60306 1485 aaKnown RBP eCLIP22.19■■□□□ 1.14
MRPS16P3-201ENST00000415961 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
MRPS16P3-201ENST00000415961 CHD1O14646 1710 aa22.16■■□□□ 1.14
MRPS16P3-201ENST00000415961 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.13
MRPS16P3-201ENST00000415961 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
MRPS16P3-201ENST00000415961 FBLN2P98095 1184 aa22.12■■□□□ 1.13
MRPS16P3-201ENST00000415961 RAD54L2Q9Y4B4 1467 aa22.06■■□□□ 1.12
MRPS16P3-201ENST00000415961 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
MRPS16P3-201ENST00000415961 SOGA1O94964 1423 aa22.03■■□□□ 1.12
MRPS16P3-201ENST00000415961 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
MRPS16P3-201ENST00000415961 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
MRPS16P3-201ENST00000415961 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
MRPS16P3-201ENST00000415961 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
MRPS16P3-201ENST00000415961 WDR97A6NE52 1622 aa21.92■■□□□ 1.1
MRPS16P3-201ENST00000415961 CHMP7Q8WUX9 453 aaPredicted RBP21.9■■□□□ 1.1
MRPS16P3-201ENST00000415961 CUX1P39880 1505 aa21.9■■□□□ 1.1
MRPS16P3-201ENST00000415961 CLASP1Q7Z460 1538 aa21.88■■□□□ 1.09
MRPS16P3-201ENST00000415961 MAGI1Q96QZ7 1491 aaPredicted RBP21.87■■□□□ 1.09
MRPS16P3-201ENST00000415961 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
MRPS16P3-201ENST00000415961 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
MRPS16P3-201ENST00000415961 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
MRPS16P3-201ENST00000415961 PBRM1Q86U86 1689 aa21.76■■□□□ 1.07
MRPS16P3-201ENST00000415961 GAPVD1Q14C86 1478 aa21.75■■□□□ 1.07
MRPS16P3-201ENST00000415961 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
MRPS16P3-201ENST00000415961 ABCA5Q8WWZ7 1642 aa21.68■■□□□ 1.06
MRPS16P3-201ENST00000415961 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
MRPS16P3-201ENST00000415961 GRIN2AQ12879 1464 aa21.57■■□□□ 1.04
MRPS16P3-201ENST00000415961 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
MRPS16P3-201ENST00000415961 ERCC6L2Q5T890 1561 aa21.54■■□□□ 1.04
MRPS16P3-201ENST00000415961 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
MRPS16P3-201ENST00000415961 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
MRPS16P3-201ENST00000415961 CEP170Q5SW79 1584 aa21.51■■□□□ 1.03
MRPS16P3-201ENST00000415961 NUP160Q12769 1436 aa21.5■■□□□ 1.03
MRPS16P3-201ENST00000415961 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
MRPS16P3-201ENST00000415961 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
MRPS16P3-201ENST00000415961 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
MRPS16P3-201ENST00000415961 SHROOM2Q13796 1616 aa21.43■■□□□ 1.02
MRPS16P3-201ENST00000415961 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
MRPS16P3-201ENST00000415961 PRG4Q92954 1404 aaPredicted RBP21.33■■□□□ 1.01
MRPS16P3-201ENST00000415961 JPH4Q96JJ6 628 aa21.3■■□□□ 1
MRPS16P3-201ENST00000415961 KIF13AQ9H1H9 1805 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms