RNA–Protein interactions for RNA: ENST00000422892.2

CXorf40A-203, Transcript of chromosome X open reading frame 40A, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CXorf40A, Length 1,536 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-203ENST00000422892 NISCHQ9Y2I1 1504 aa30.45■■■□□ 2.46
CXorf40A-203ENST00000422892 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
CXorf40A-203ENST00000422892 ABCC9O60706 1549 aa25.79■■□□□ 1.72
CXorf40A-203ENST00000422892 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
CXorf40A-203ENST00000422892 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
CXorf40A-203ENST00000422892 DCAF1Q9Y4B6 1507 aa25.18■■□□□ 1.62
CXorf40A-203ENST00000422892 NACADO15069 1562 aa25.1■■□□□ 1.61
CXorf40A-203ENST00000422892 MYO15BQ96JP2 1530 aa25.08■■□□□ 1.61
CXorf40A-203ENST00000422892 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
CXorf40A-203ENST00000422892 SCRIBQ14160 1630 aa24.6■■□□□ 1.53
CXorf40A-203ENST00000422892 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
CXorf40A-203ENST00000422892 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
CXorf40A-203ENST00000422892 BICRAQ9NZM4 1560 aa24.22■■□□□ 1.47
CXorf40A-203ENST00000422892 PABPN1Q86U42 306 aaKnown RBP eCLIP24.2■■□□□ 1.46
CXorf40A-203ENST00000422892 CECR2Q9BXF3 1484 aa23.7■■□□□ 1.38
CXorf40A-203ENST00000422892 EIF4G1Q04637 1599 aaKnown RBP23.55■■□□□ 1.36
CXorf40A-203ENST00000422892 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
CXorf40A-203ENST00000422892 SMARCA4P51532 1647 aa23.54■■□□□ 1.36
CXorf40A-203ENST00000422892 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
CXorf40A-203ENST00000422892 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
CXorf40A-203ENST00000422892 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.33
CXorf40A-203ENST00000422892 WIZO95785 1651 aa23.33■■□□□ 1.33
CXorf40A-203ENST00000422892 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
CXorf40A-203ENST00000422892 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
CXorf40A-203ENST00000422892 ATAD2BQ9ULI0 1458 aa23.24■■□□□ 1.31
CXorf40A-203ENST00000422892 SMARCA2P51531 1590 aa23.24■■□□□ 1.31
CXorf40A-203ENST00000422892 DNAJC5BQ9UF47 199 aa23.18■■□□□ 1.3
CXorf40A-203ENST00000422892 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
CXorf40A-203ENST00000422892 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
CXorf40A-203ENST00000422892 HMGXB3Q12766 1538 aa23.07■■□□□ 1.28
CXorf40A-203ENST00000422892 TOP2AP11388 1531 aaKnown RBP23.07■■□□□ 1.28
CXorf40A-203ENST00000422892 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
CXorf40A-203ENST00000422892 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
CXorf40A-203ENST00000422892 CFTRP13569 1480 aa22.48■■□□□ 1.19
CXorf40A-203ENST00000422892 LAMC3Q9Y6N6 1575 aa22.47■■□□□ 1.19
CXorf40A-203ENST00000422892 NESP48681 1621 aa22.45■■□□□ 1.19
CXorf40A-203ENST00000422892 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
CXorf40A-203ENST00000422892 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
CXorf40A-203ENST00000422892 FANCD2Q9BXW9 1451 aa22.26■■□□□ 1.15
CXorf40A-203ENST00000422892 KIF21AQ7Z4S6 1674 aa22.22■■□□□ 1.15
CXorf40A-203ENST00000422892 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
CXorf40A-203ENST00000422892 ERCC6Q03468 1493 aa22.19■■□□□ 1.14
CXorf40A-203ENST00000422892 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
CXorf40A-203ENST00000422892 WRNQ14191 1432 aaPredicted RBP eCLIP22.07■■□□□ 1.12
CXorf40A-203ENST00000422892 CHIC1Q5VXU3 224 aa22.06■■□□□ 1.12
CXorf40A-203ENST00000422892 SYNJ1O43426 1573 aa22.06■■□□□ 1.12
CXorf40A-203ENST00000422892 MRC2Q9UBG0 1479 aa22.04■■□□□ 1.12
CXorf40A-203ENST00000422892 CUX1P39880 1505 aa22.03■■□□□ 1.12
CXorf40A-203ENST00000422892 URB2Q14146 1524 aaKnown RBP22■■□□□ 1.11
CXorf40A-203ENST00000422892 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
CXorf40A-203ENST00000422892 THOC2Q8NI27 1593 aaKnown RBP21.98■■□□□ 1.11
CXorf40A-203ENST00000422892 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
CXorf40A-203ENST00000422892 DNMBPQ6XZF7 1577 aa21.98■■□□□ 1.11
CXorf40A-203ENST00000422892 TOPBP1Q92547 1522 aa21.96■■□□□ 1.11
CXorf40A-203ENST00000422892 WDR62O43379 1518 aa21.93■■□□□ 1.1
CXorf40A-203ENST00000422892 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
CXorf40A-203ENST00000422892 FGD5Q6ZNL6 1462 aa21.85■■□□□ 1.09
CXorf40A-203ENST00000422892 POLA1P09884 1462 aaPredicted RBP21.81■■□□□ 1.08
CXorf40A-203ENST00000422892 CUX2O14529 1486 aa21.75■■□□□ 1.07
CXorf40A-203ENST00000422892 SOGA1O94964 1423 aa21.74■■□□□ 1.07
CXorf40A-203ENST00000422892 RAD54L2Q9Y4B4 1467 aa21.72■■□□□ 1.07
CXorf40A-203ENST00000422892 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
CXorf40A-203ENST00000422892 WDR97A6NE52 1622 aa21.69■■□□□ 1.06
CXorf40A-203ENST00000422892 TARBP1Q13395 1621 aaKnown RBP21.68■■□□□ 1.06
CXorf40A-203ENST00000422892 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
CXorf40A-203ENST00000422892 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
CXorf40A-203ENST00000422892 TDRD9Q8NDG6 1382 aaKnown RBP21.55■■□□□ 1.04
CXorf40A-203ENST00000422892 ZNF608Q9ULD9 1512 aaPredicted RBP21.55■■□□□ 1.04
CXorf40A-203ENST00000422892 ABCA5Q8WWZ7 1642 aa21.55■■□□□ 1.04
CXorf40A-203ENST00000422892 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
CXorf40A-203ENST00000422892 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
CXorf40A-203ENST00000422892 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
CXorf40A-203ENST00000422892 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.03
CXorf40A-203ENST00000422892 GAPVD1Q14C86 1478 aa21.49■■□□□ 1.03
CXorf40A-203ENST00000422892 EEA1Q15075 1411 aa21.49■■□□□ 1.03
CXorf40A-203ENST00000422892 PBRM1Q86U86 1689 aa21.46■■□□□ 1.03
CXorf40A-203ENST00000422892 GRIN2BQ13224 1484 aa21.41■■□□□ 1.02
CXorf40A-203ENST00000422892 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.01
CXorf40A-203ENST00000422892 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
CXorf40A-203ENST00000422892 IGF1RP08069 1367 aa21.37■■□□□ 1.01
CXorf40A-203ENST00000422892 CUL7Q14999 1698 aa21.33■■□□□ 1.01
CXorf40A-203ENST00000422892 SNAPC4Q5SXM2 1469 aa21.33■■□□□ 1
CXorf40A-203ENST00000422892 KIF21BO75037 1637 aa21.31■■□□□ 1
CXorf40A-203ENST00000422892 ADAMTS12P58397 1594 aa21.3■■□□□ 1
CXorf40A-203ENST00000422892 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
CXorf40A-203ENST00000422892 PRXQ9BXM0 1461 aa21.3■■□□□ 1
CXorf40A-203ENST00000422892 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
CXorf40A-203ENST00000422892 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
CXorf40A-203ENST00000422892 FHAD1B1AJZ9 1412 aa21.26■□□□□ 0.99
CXorf40A-203ENST00000422892 RAPGEF2Q9Y4G8 1499 aa21.25■□□□□ 0.99
CXorf40A-203ENST00000422892 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
CXorf40A-203ENST00000422892 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
CXorf40A-203ENST00000422892 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
CXorf40A-203ENST00000422892 LOC105371045A0A1W2PR82 267 aa21.19■□□□□ 0.98
CXorf40A-203ENST00000422892 FBLN2P98095 1184 aa21.19■□□□□ 0.98
CXorf40A-203ENST00000422892 CHD1O14646 1710 aa21.14■□□□□ 0.97
CXorf40A-203ENST00000422892 GRIN2AQ12879 1464 aa21.14■□□□□ 0.97
CXorf40A-203ENST00000422892 UBTFP17480 764 aaKnown RBP21.06■□□□□ 0.96
CXorf40A-203ENST00000422892 CTTNBP2Q8WZ74 1663 aa21.06■□□□□ 0.96
CXorf40A-203ENST00000422892 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms