Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
NICN1Q9BSH3 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NICN1Q9BSH3 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
NICN1Q9BSH3 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 AC120114.4-201ENST00000623731 2194 ntBASIC11.51□□□□□ -0.57
NICN1Q9BSH3 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 CFL1P6-201ENST00000400899 494 ntBASIC11.51□□□□□ -0.57
NICN1Q9BSH3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 AC104306.2-201ENST00000451877 341 ntBASIC11.51□□□□□ -0.57
NICN1Q9BSH3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 MIR6805-201ENST00000615055 62 ntBASIC11.51□□□□□ -0.57
NICN1Q9BSH3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 AL805961.1-203ENST00000641078 1258 ntBASIC11.51□□□□□ -0.57
NICN1Q9BSH3 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 PDXDC2P-206ENST00000534700 1315 ntBASIC11.51□□□□□ -0.57
NICN1Q9BSH3 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 AL359510.2-201ENST00000624958 2249 ntBASIC11.51□□□□□ -0.57
NICN1Q9BSH3 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NICN1Q9BSH3 GUCY2EP-203ENST00000531117 1918 ntBASIC11.5□□□□□ -0.57
NICN1Q9BSH3 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 AC131902.2-201ENST00000566892 2172 ntBASIC11.5□□□□□ -0.57
NICN1Q9BSH3 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NICN1Q9BSH3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms