RNA–Protein interactions for RNA: ENST00000394990.8

SMIM29-202, Transcript of small integral membrane protein 29, humanhuman

TSL 1 (best) BASIC

Gene SMIM29, Length 792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-202ENST00000394990 NISCHQ9Y2I1 1504 aa35.05■■■■□ 3.2
SMIM29-202ENST00000394990 ABCC9O60706 1549 aa32.71■■■□□ 2.83
SMIM29-202ENST00000394990 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
SMIM29-202ENST00000394990 DNAJC5BQ9UF47 199 aa31.56■■■□□ 2.64
SMIM29-202ENST00000394990 RB1CC1Q8TDY2 1594 aa30.69■■■□□ 2.5
SMIM29-202ENST00000394990 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
SMIM29-202ENST00000394990 NACADO15069 1562 aa30.28■■■□□ 2.44
SMIM29-202ENST00000394990 UNC13AQ9UPW8 1703 aa30■■■□□ 2.39
SMIM29-202ENST00000394990 BICRAQ9NZM4 1560 aa29.92■■■□□ 2.38
SMIM29-202ENST00000394990 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
SMIM29-202ENST00000394990 MYO15BQ96JP2 1530 aa29.61■■■□□ 2.33
SMIM29-202ENST00000394990 DNAJC5Q9H3Z4 198 aa29.58■■■□□ 2.33
SMIM29-202ENST00000394990 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
SMIM29-202ENST00000394990 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
SMIM29-202ENST00000394990 SHROOM4Q9ULL8 1493 aa29.36■■■□□ 2.29
SMIM29-202ENST00000394990 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
SMIM29-202ENST00000394990 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
SMIM29-202ENST00000394990 DCAF1Q9Y4B6 1507 aa28.89■■■□□ 2.22
SMIM29-202ENST00000394990 ZCCHC6Q5VYS8 1495 aaKnown RBP28.87■■■□□ 2.21
SMIM29-202ENST00000394990 CUX2O14529 1486 aa28.54■■■□□ 2.16
SMIM29-202ENST00000394990 ERCC6Q03468 1493 aa28.26■■■□□ 2.11
SMIM29-202ENST00000394990 NCAPD3P42695 1498 aa28.02■■■□□ 2.08
SMIM29-202ENST00000394990 NESP48681 1621 aa27.86■■■□□ 2.05
SMIM29-202ENST00000394990 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
SMIM29-202ENST00000394990 ATAD2BQ9ULI0 1458 aa27.81■■■□□ 2.04
SMIM29-202ENST00000394990 THOC2Q8NI27 1593 aaKnown RBP27.75■■■□□ 2.03
SMIM29-202ENST00000394990 HMGXB3Q12766 1538 aa27.7■■■□□ 2.02
SMIM29-202ENST00000394990 SMARCA2P51531 1590 aa27.62■■■□□ 2.01
SMIM29-202ENST00000394990 SMARCA4P51532 1647 aa27.52■■■□□ 2
SMIM29-202ENST00000394990 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
SMIM29-202ENST00000394990 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
SMIM29-202ENST00000394990 KIF21AQ7Z4S6 1674 aa27.42■■□□□ 1.98
SMIM29-202ENST00000394990 PDS5BQ9NTI5 1447 aa27.34■■□□□ 1.97
SMIM29-202ENST00000394990 PEG3Q9GZU2 1588 aa27.28■■□□□ 1.96
SMIM29-202ENST00000394990 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
SMIM29-202ENST00000394990 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
SMIM29-202ENST00000394990 WDR62O43379 1518 aa27.17■■□□□ 1.94
SMIM29-202ENST00000394990 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
SMIM29-202ENST00000394990 OSCARQ8IYS5 282 aa27.07■■□□□ 1.92
SMIM29-202ENST00000394990 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
SMIM29-202ENST00000394990 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
SMIM29-202ENST00000394990 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.89
SMIM29-202ENST00000394990 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.89
SMIM29-202ENST00000394990 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.89
SMIM29-202ENST00000394990 FANCD2Q9BXW9 1451 aa26.79■■□□□ 1.88
SMIM29-202ENST00000394990 ARHGEF11O15085 1522 aa26.68■■□□□ 1.86
SMIM29-202ENST00000394990 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
SMIM29-202ENST00000394990 CFTRP13569 1480 aa26.62■■□□□ 1.85
SMIM29-202ENST00000394990 WIZO95785 1651 aa26.61■■□□□ 1.85
SMIM29-202ENST00000394990 CYB5RLQ6IPT4 315 aa26.52■■□□□ 1.84
SMIM29-202ENST00000394990 ZNF608Q9ULD9 1512 aaPredicted RBP26.48■■□□□ 1.83
SMIM29-202ENST00000394990 TRHP20396 242 aaPredicted RBP26.46■■□□□ 1.83
SMIM29-202ENST00000394990 IFT140Q96RY7 1462 aa26.38■■□□□ 1.81
SMIM29-202ENST00000394990 ARAP1Q96P48 1450 aa26.37■■□□□ 1.81
SMIM29-202ENST00000394990 AEBP2Q6ZN18 517 aaPredicted RBP26.32■■□□□ 1.8
SMIM29-202ENST00000394990 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
SMIM29-202ENST00000394990 TOP2AP11388 1531 aaKnown RBP26.21■■□□□ 1.79
SMIM29-202ENST00000394990 RSF1Q96T23 1441 aaPredicted RBP26.2■■□□□ 1.78
SMIM29-202ENST00000394990 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
SMIM29-202ENST00000394990 CHD1O14646 1710 aa26.18■■□□□ 1.78
SMIM29-202ENST00000394990 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
SMIM29-202ENST00000394990 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.772e-7■■■■■ 56.2
SMIM29-202ENST00000394990 FBLN2P98095 1184 aa26.05■■□□□ 1.76
SMIM29-202ENST00000394990 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
SMIM29-202ENST00000394990 ABCC8Q09428 1581 aa26.02■■□□□ 1.76
SMIM29-202ENST00000394990 DNMBPQ6XZF7 1577 aa25.99■■□□□ 1.75
SMIM29-202ENST00000394990 CCDC88BA6NC98 1476 aa25.95■■□□□ 1.74
SMIM29-202ENST00000394990 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
SMIM29-202ENST00000394990 POLA1P09884 1462 aaPredicted RBP25.88■■□□□ 1.73
SMIM29-202ENST00000394990 SNAPC4Q5SXM2 1469 aa25.8■■□□□ 1.72
SMIM29-202ENST00000394990 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
SMIM29-202ENST00000394990 TDRD9Q8NDG6 1382 aaKnown RBP25.8■■□□□ 1.72
SMIM29-202ENST00000394990 SYNJ1O43426 1573 aa25.77■■□□□ 1.72
SMIM29-202ENST00000394990 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
SMIM29-202ENST00000394990 SOGA1O94964 1423 aa25.71■■□□□ 1.71
SMIM29-202ENST00000394990 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.7
SMIM29-202ENST00000394990 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
SMIM29-202ENST00000394990 WDR97A6NE52 1622 aa25.66■■□□□ 1.7
SMIM29-202ENST00000394990 SYNJ2O15056 1496 aa25.62■■□□□ 1.69
SMIM29-202ENST00000394990 GRIN2BQ13224 1484 aa25.59■■□□□ 1.69
SMIM29-202ENST00000394990 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
SMIM29-202ENST00000394990 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
SMIM29-202ENST00000394990 CUX1P39880 1505 aa25.42■■□□□ 1.66
SMIM29-202ENST00000394990 PBRM1Q86U86 1689 aa25.39■■□□□ 1.66
SMIM29-202ENST00000394990 ILDR1Q86SU0 546 aaPredicted RBP25.39■■□□□ 1.66
SMIM29-202ENST00000394990 KIF13AQ9H1H9 1805 aa25.35■■□□□ 1.65
SMIM29-202ENST00000394990 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
SMIM29-202ENST00000394990 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
SMIM29-202ENST00000394990 ABCA5Q8WWZ7 1642 aa25.27■■□□□ 1.64
SMIM29-202ENST00000394990 KDM4FA0A1W2PPD8 638 aa25.26■■□□□ 1.63
SMIM29-202ENST00000394990 NUP160Q12769 1436 aa25.26■■□□□ 1.63
SMIM29-202ENST00000394990 ABCA10Q8WWZ4 1543 aa25.23■■□□□ 1.63
SMIM29-202ENST00000394990 SHROOM2Q13796 1616 aa25.22■■□□□ 1.63
SMIM29-202ENST00000394990 ABCC10Q5T3U5 1492 aa25.15■■□□□ 1.62
SMIM29-202ENST00000394990 ADAMTS12P58397 1594 aa25.14■■□□□ 1.62
SMIM29-202ENST00000394990 FAM69CQ0P6D2 419 aa25.13■■□□□ 1.61
SMIM29-202ENST00000394990 DIP2BQ9P265 1576 aa25.05■■□□□ 1.6
SMIM29-202ENST00000394990 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
SMIM29-202ENST00000394990 MAPKBP1O60336 1514 aa25.03■■□□□ 1.6
SMIM29-202ENST00000394990 KDM6BO15054 1643 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms