RNA–Protein interactions for RNA: ENST00000423546.1

FAM225B-201, Transcript of family with sequence similarity 225 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM225B, Length 5,629 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM225B-201ENST00000423546 NISCHQ9Y2I1 1504 aa22.44■■□□□ 1.18
FAM225B-201ENST00000423546 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
FAM225B-201ENST00000423546 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
FAM225B-201ENST00000423546 SHROOM4Q9ULL8 1493 aa20.6■□□□□ 0.89
FAM225B-201ENST00000423546 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
FAM225B-201ENST00000423546 PELP1Q8IZL8 1130 aaKnown RBP19.49■□□□□ 0.71
FAM225B-201ENST00000423546 FAM9AQ8IZU1 332 aaPredicted RBP19.33■□□□□ 0.68
FAM225B-201ENST00000423546 APLP2Q06481 763 aa19.29■□□□□ 0.68
FAM225B-201ENST00000423546 PCGF6Q9BYE7 350 aa19.28■□□□□ 0.68
FAM225B-201ENST00000423546 ABCC9O60706 1549 aa19.28■□□□□ 0.68
FAM225B-201ENST00000423546 TRIM41Q8WV44 630 aa19.25■□□□□ 0.67
FAM225B-201ENST00000423546 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
FAM225B-201ENST00000423546 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
FAM225B-201ENST00000423546 TTBK1Q5TCY1 1321 aaPredicted RBP18.96■□□□□ 0.63
FAM225B-201ENST00000423546 ZEB1P37275 1124 aaPredicted RBP18.92■□□□□ 0.62
FAM225B-201ENST00000423546 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.59
FAM225B-201ENST00000423546 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
FAM225B-201ENST00000423546 TRIM26Q12899 539 aaPredicted RBP18.73■□□□□ 0.59
FAM225B-201ENST00000423546 ZCCHC6Q5VYS8 1495 aaKnown RBP18.73■□□□□ 0.59
FAM225B-201ENST00000423546 ERICH6Q7L0X2 663 aa18.72■□□□□ 0.59
FAM225B-201ENST00000423546 LOC105371045A0A1W2PR82 267 aa18.72■□□□□ 0.59
FAM225B-201ENST00000423546 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
FAM225B-201ENST00000423546 CENPBP07199 599 aaPredicted RBP18.65■□□□□ 0.58
FAM225B-201ENST00000423546 HRCP23327 699 aa18.65■□□□□ 0.58
FAM225B-201ENST00000423546 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
FAM225B-201ENST00000423546 PPARGC1BQ86YN6 1023 aaKnown RBP18.53■□□□□ 0.56
FAM225B-201ENST00000423546 RB1CC1Q8TDY2 1594 aa18.49■□□□□ 0.55
FAM225B-201ENST00000423546 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
FAM225B-201ENST00000423546 NACADO15069 1562 aa18.38■□□□□ 0.53
FAM225B-201ENST00000423546 NEFLP07196 543 aa18.36■□□□□ 0.53
FAM225B-201ENST00000423546 YTHDC1Q96MU7 727 aaKnown RBP18.29■□□□□ 0.52
FAM225B-201ENST00000423546 SCRIBQ14160 1630 aa18.28■□□□□ 0.52
FAM225B-201ENST00000423546 MYT1Q01538 1121 aa18.14■□□□□ 0.49
FAM225B-201ENST00000423546 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
FAM225B-201ENST00000423546 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
FAM225B-201ENST00000423546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
FAM225B-201ENST00000423546 ITGAEP38570 1179 aa18■□□□□ 0.47
FAM225B-201ENST00000423546 MYT1LQ9UL68 1186 aa17.98■□□□□ 0.47
FAM225B-201ENST00000423546 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
FAM225B-201ENST00000423546 POLR3GLQ9BT43 218 aa17.95■□□□□ 0.46
FAM225B-201ENST00000423546 DAXXQ9UER7 740 aaPredicted RBP17.94■□□□□ 0.46
FAM225B-201ENST00000423546 CSRNP3Q8WYN3 585 aa17.92■□□□□ 0.46
FAM225B-201ENST00000423546 RSF1Q96T23 1441 aaPredicted RBP17.9■□□□□ 0.46
FAM225B-201ENST00000423546 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.44
FAM225B-201ENST00000423546 CNGB1Q14028 1251 aaPredicted RBP17.79■□□□□ 0.44
FAM225B-201ENST00000423546 FAM50AQ14320 339 aaKnown RBP17.7■□□□□ 0.42
FAM225B-201ENST00000423546 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
FAM225B-201ENST00000423546 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
FAM225B-201ENST00000423546 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
FAM225B-201ENST00000423546 CLSPNQ9HAW4 1339 aa17.53■□□□□ 0.4
FAM225B-201ENST00000423546 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.4
FAM225B-201ENST00000423546 EEA1Q15075 1411 aa17.52■□□□□ 0.39
FAM225B-201ENST00000423546 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
FAM225B-201ENST00000423546 P3H3Q8IVL6 736 aa17.46■□□□□ 0.39
FAM225B-201ENST00000423546 TRIM52Q96A61 297 aa17.45■□□□□ 0.38
FAM225B-201ENST00000423546 RTL5Q5HYW3 569 aaPredicted RBP17.45■□□□□ 0.38
FAM225B-201ENST00000423546 GOLGA3Q08378 1498 aa17.42■□□□□ 0.38
FAM225B-201ENST00000423546 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
FAM225B-201ENST00000423546 CEP162Q5TB80 1403 aa17.4■□□□□ 0.38
FAM225B-201ENST00000423546 CLIP1P30622 1438 aa17.4■□□□□ 0.38
FAM225B-201ENST00000423546 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
FAM225B-201ENST00000423546 MROH2BQ7Z745 1585 aa17.37■□□□□ 0.37
FAM225B-201ENST00000423546 GTF3C3Q9Y5Q9 886 aa17.37■□□□□ 0.37
FAM225B-201ENST00000423546 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
FAM225B-201ENST00000423546 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.36
FAM225B-201ENST00000423546 ANP32CO43423 234 aa17.29■□□□□ 0.36
FAM225B-201ENST00000423546 CEP164Q9UPV0 1460 aa17.28■□□□□ 0.36
FAM225B-201ENST00000423546 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
FAM225B-201ENST00000423546 FBLN2P98095 1184 aa17.27■□□□□ 0.36
FAM225B-201ENST00000423546 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
FAM225B-201ENST00000423546 CCDC88BA6NC98 1476 aa17.22■□□□□ 0.35
FAM225B-201ENST00000423546 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
FAM225B-201ENST00000423546 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
FAM225B-201ENST00000423546 BCANQ96GW7 911 aa17.2■□□□□ 0.34
FAM225B-201ENST00000423546 ZBTB47Q9UFB7 747 aaPredicted RBP17.19■□□□□ 0.34
FAM225B-201ENST00000423546 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
FAM225B-201ENST00000423546 KIF27Q86VH2 1401 aa17.18■□□□□ 0.34
FAM225B-201ENST00000423546 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
FAM225B-201ENST00000423546 WIZO95785 1651 aa17.17■□□□□ 0.34
FAM225B-201ENST00000423546 SOGA1O94964 1423 aa17.17■□□□□ 0.34
FAM225B-201ENST00000423546 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
FAM225B-201ENST00000423546 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
FAM225B-201ENST00000423546 TONSLQ96HA7 1378 aa17.11■□□□□ 0.33
FAM225B-201ENST00000423546 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
FAM225B-201ENST00000423546 BCL11AQ9H165 835 aa17.08■□□□□ 0.32
FAM225B-201ENST00000423546 PDS5BQ9NTI5 1447 aa17.07■□□□□ 0.32
FAM225B-201ENST00000423546 MTUS2Q5JR59 1369 aa17.06■□□□□ 0.32
FAM225B-201ENST00000423546 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
FAM225B-201ENST00000423546 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
FAM225B-201ENST00000423546 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
FAM225B-201ENST00000423546 ATAD2BQ9ULI0 1458 aa17.01■□□□□ 0.31
FAM225B-201ENST00000423546 NEFMP07197 916 aa17■□□□□ 0.31
FAM225B-201ENST00000423546 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
FAM225B-201ENST00000423546 DDX10Q13206 875 aaKnown RBP16.98■□□□□ 0.31
FAM225B-201ENST00000423546 MIER1Q8N108 512 aa16.96■□□□□ 0.31
FAM225B-201ENST00000423546 CHIC2Q9UKJ5 165 aa16.96■□□□□ 0.31
FAM225B-201ENST00000423546 VPS8Q8N3P4 1428 aa16.94■□□□□ 0.3
FAM225B-201ENST00000423546 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
FAM225B-201ENST00000423546 CUX2O14529 1486 aa16.9■□□□□ 0.3
FAM225B-201ENST00000423546 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms