RNA–Protein interactions for RNA: ENST00000355243.7

PAX2-201, Transcript of paired box 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PAX2, Length 4,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX2-201ENST00000355243 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
PAX2-201ENST00000355243 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
PAX2-201ENST00000355243 SUPT5HO00267 1087 aaKnown RBP21.91■■□□□ 1.1
PAX2-201ENST00000355243 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
PAX2-201ENST00000355243 PCGF6Q9BYE7 350 aa21.25■□□□□ 0.99
PAX2-201ENST00000355243 HRCP23327 699 aa21.19■□□□□ 0.98
PAX2-201ENST00000355243 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
PAX2-201ENST00000355243 PPARGC1BQ86YN6 1023 aaKnown RBP20.89■□□□□ 0.93
PAX2-201ENST00000355243 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
PAX2-201ENST00000355243 LOC105371045A0A1W2PR82 267 aa20.68■□□□□ 0.9
PAX2-201ENST00000355243 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
PAX2-201ENST00000355243 TRIM26Q12899 539 aaPredicted RBP20.48■□□□□ 0.87
PAX2-201ENST00000355243 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
PAX2-201ENST00000355243 FAM9AQ8IZU1 332 aaPredicted RBP20.38■□□□□ 0.85
PAX2-201ENST00000355243 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
PAX2-201ENST00000355243 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
PAX2-201ENST00000355243 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
PAX2-201ENST00000355243 PELP1Q8IZL8 1130 aaKnown RBP20.17■□□□□ 0.82
PAX2-201ENST00000355243 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
PAX2-201ENST00000355243 CCER1Q8TC90 406 aaPredicted RBP19.92■□□□□ 0.78
PAX2-201ENST00000355243 TTBK1Q5TCY1 1321 aaPredicted RBP19.88■□□□□ 0.77
PAX2-201ENST00000355243 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.76
PAX2-201ENST00000355243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
PAX2-201ENST00000355243 CENPBP07199 599 aaPredicted RBP19.74■□□□□ 0.75
PAX2-201ENST00000355243 ACIN1Q9UKV3 1341 aaKnown RBP19.59■□□□□ 0.73
PAX2-201ENST00000355243 DIEXFQ68CQ4 756 aaKnown RBP19.59■□□□□ 0.73
PAX2-201ENST00000355243 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
PAX2-201ENST00000355243 GTF3C3Q9Y5Q9 886 aa19.54■□□□□ 0.72
PAX2-201ENST00000355243 YTHDC1Q96MU7 727 aaKnown RBP19.52■□□□□ 0.72
PAX2-201ENST00000355243 NEUROD1Q13562 356 aa19.52■□□□□ 0.72
PAX2-201ENST00000355243 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
PAX2-201ENST00000355243 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
PAX2-201ENST00000355243 ABCC9O60706 1549 aa19.39■□□□□ 0.69
PAX2-201ENST00000355243 MYT1Q01538 1121 aa19.33■□□□□ 0.69
PAX2-201ENST00000355243 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
PAX2-201ENST00000355243 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
PAX2-201ENST00000355243 APLP2Q06481 763 aa19.23■□□□□ 0.67
PAX2-201ENST00000355243 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
PAX2-201ENST00000355243 ZNF316A6NFI3 1004 aaPredicted RBP19.22■□□□□ 0.67
PAX2-201ENST00000355243 CECR2Q9BXF3 1484 aa19.11■□□□□ 0.65
PAX2-201ENST00000355243 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
PAX2-201ENST00000355243 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
PAX2-201ENST00000355243 MIER1Q8N108 512 aa19■□□□□ 0.63
PAX2-201ENST00000355243 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
PAX2-201ENST00000355243 CEP162Q5TB80 1403 aa18.97■□□□□ 0.63
PAX2-201ENST00000355243 WIZO95785 1651 aa18.84■□□□□ 0.61
PAX2-201ENST00000355243 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.6
PAX2-201ENST00000355243 SOGA1O94964 1423 aa18.82■□□□□ 0.6
PAX2-201ENST00000355243 CCDC88BA6NC98 1476 aa18.81■□□□□ 0.6
PAX2-201ENST00000355243 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
PAX2-201ENST00000355243 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
PAX2-201ENST00000355243 ITGAEP38570 1179 aa18.73■□□□□ 0.59
PAX2-201ENST00000355243 NACADO15069 1562 aa18.72■□□□□ 0.59
PAX2-201ENST00000355243 GOLGA3Q08378 1498 aa18.67■□□□□ 0.58
PAX2-201ENST00000355243 EEA1Q15075 1411 aa18.67■□□□□ 0.58
PAX2-201ENST00000355243 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
PAX2-201ENST00000355243 CLIP1P30622 1438 aa18.63■□□□□ 0.57
PAX2-201ENST00000355243 RUSC2Q8N2Y8 1516 aa18.61■□□□□ 0.57
PAX2-201ENST00000355243 BCANQ96GW7 911 aa18.59■□□□□ 0.57
PAX2-201ENST00000355243 NEFLP07196 543 aa18.53■□□□□ 0.56
PAX2-201ENST00000355243 SUPT16HQ9Y5B9 1047 aaKnown RBP18.52■□□□□ 0.56
PAX2-201ENST00000355243 CLSPNQ9HAW4 1339 aa18.51■□□□□ 0.55
PAX2-201ENST00000355243 ATP1B4Q9UN42 357 aaPredicted RBP18.5■□□□□ 0.55
PAX2-201ENST00000355243 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
PAX2-201ENST00000355243 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
PAX2-201ENST00000355243 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
PAX2-201ENST00000355243 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
PAX2-201ENST00000355243 FKBP8Q14318 412 aa18.38■□□□□ 0.53
PAX2-201ENST00000355243 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
PAX2-201ENST00000355243 SMARCA4P51532 1647 aa18.32■□□□□ 0.52
PAX2-201ENST00000355243 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
PAX2-201ENST00000355243 KANK4Q5T7N3 995 aaPredicted RBP18.31■□□□□ 0.52
PAX2-201ENST00000355243 TSHZ2Q9NRE2 1034 aa18.31■□□□□ 0.52
PAX2-201ENST00000355243 ANP32EQ9BTT0 268 aa18.29■□□□□ 0.52
PAX2-201ENST00000355243 ERICH6Q7L0X2 663 aa18.28■□□□□ 0.52
PAX2-201ENST00000355243 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
PAX2-201ENST00000355243 EIF4G1Q04637 1599 aaKnown RBP18.28■□□□□ 0.52
PAX2-201ENST00000355243 RAPGEF2Q9Y4G8 1499 aa18.28■□□□□ 0.52
PAX2-201ENST00000355243 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
PAX2-201ENST00000355243 TRIM52Q96A61 297 aa18.23■□□□□ 0.51
PAX2-201ENST00000355243 HIRIP3Q9BW71 556 aaPredicted RBP18.23■□□□□ 0.51
PAX2-201ENST00000355243 ANP32CO43423 234 aa18.23■□□□□ 0.51
PAX2-201ENST00000355243 CCNB3Q8WWL7 1395 aa18.14■□□□□ 0.5
PAX2-201ENST00000355243 SIN3AQ96ST3 1273 aa18.14■□□□□ 0.49
PAX2-201ENST00000355243 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
PAX2-201ENST00000355243 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
PAX2-201ENST00000355243 KIF21BO75037 1637 aa18.12■□□□□ 0.49
PAX2-201ENST00000355243 SYNJ1O43426 1573 aa18.09■□□□□ 0.49
PAX2-201ENST00000355243 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
PAX2-201ENST00000355243 CDK11AQ9UQ88 783 aaPredicted RBP18.03■□□□□ 0.48
PAX2-201ENST00000355243 RBM19Q9Y4C8 960 aaKnown RBP18.03■□□□□ 0.48
PAX2-201ENST00000355243 IRX6P78412 446 aaPredicted RBP18.01■□□□□ 0.47
PAX2-201ENST00000355243 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
PAX2-201ENST00000355243 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
PAX2-201ENST00000355243 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
PAX2-201ENST00000355243 TONSLQ96HA7 1378 aa17.97■□□□□ 0.47
PAX2-201ENST00000355243 SETD5Q9C0A6 1442 aa17.94■□□□□ 0.46
PAX2-201ENST00000355243 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
PAX2-201ENST00000355243 CNGB1Q14028 1251 aaPredicted RBP17.93■□□□□ 0.46
PAX2-201ENST00000355243 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms