RNA–Protein interactions for RNA: ENST00000622445.4

CACNB1-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 5 BASIC

Gene CACNB1, Length 3,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-212ENST00000622445 NISCHQ9Y2I1 1504 aa24.26■■□□□ 1.47
CACNB1-212ENST00000622445 SHROOM4Q9ULL8 1493 aa22.56■■□□□ 1.2
CACNB1-212ENST00000622445 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
CACNB1-212ENST00000622445 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
CACNB1-212ENST00000622445 PCGF6Q9BYE7 350 aa21.46■■□□□ 1.03
CACNB1-212ENST00000622445 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1
CACNB1-212ENST00000622445 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
CACNB1-212ENST00000622445 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
CACNB1-212ENST00000622445 LOC105371045A0A1W2PR82 267 aa21.1■□□□□ 0.97
CACNB1-212ENST00000622445 HRCP23327 699 aa21.02■□□□□ 0.95
CACNB1-212ENST00000622445 FAM9AQ8IZU1 332 aaPredicted RBP20.93■□□□□ 0.94
CACNB1-212ENST00000622445 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
CACNB1-212ENST00000622445 TTBK1Q5TCY1 1321 aaPredicted RBP20.6■□□□□ 0.89
CACNB1-212ENST00000622445 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
CACNB1-212ENST00000622445 TRIM41Q8WV44 630 aa20.39■□□□□ 0.85
CACNB1-212ENST00000622445 TRIM26Q12899 539 aaPredicted RBP20.33■□□□□ 0.84
CACNB1-212ENST00000622445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
CACNB1-212ENST00000622445 CCER1Q8TC90 406 aaPredicted RBP19.98■□□□□ 0.79
CACNB1-212ENST00000622445 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
CACNB1-212ENST00000622445 DCAF1Q9Y4B6 1507 aa19.89■□□□□ 0.77
CACNB1-212ENST00000622445 YTHDC1Q96MU7 727 aaKnown RBP19.82■□□□□ 0.76
CACNB1-212ENST00000622445 ZEB1P37275 1124 aaPredicted RBP19.81■□□□□ 0.76
CACNB1-212ENST00000622445 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
CACNB1-212ENST00000622445 CCDC180Q9P1Z9 1646 aa19.75■□□□□ 0.75
CACNB1-212ENST00000622445 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
CACNB1-212ENST00000622445 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.73
CACNB1-212ENST00000622445 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
CACNB1-212ENST00000622445 ABCC9O60706 1549 aa19.61■□□□□ 0.73
CACNB1-212ENST00000622445 NEUROD1Q13562 356 aa19.56■□□□□ 0.72
CACNB1-212ENST00000622445 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
CACNB1-212ENST00000622445 DIEXFQ68CQ4 756 aaKnown RBP19.54■□□□□ 0.72
CACNB1-212ENST00000622445 GTF3C3Q9Y5Q9 886 aa19.53■□□□□ 0.72
CACNB1-212ENST00000622445 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
CACNB1-212ENST00000622445 CECR2Q9BXF3 1484 aa19.42■□□□□ 0.7
CACNB1-212ENST00000622445 ACIN1Q9UKV3 1341 aaKnown RBP19.39■□□□□ 0.69
CACNB1-212ENST00000622445 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
CACNB1-212ENST00000622445 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
CACNB1-212ENST00000622445 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
CACNB1-212ENST00000622445 APLP2Q06481 763 aa19.22■□□□□ 0.67
CACNB1-212ENST00000622445 ITGAEP38570 1179 aa19.19■□□□□ 0.66
CACNB1-212ENST00000622445 MROH2BQ7Z745 1585 aa19.17■□□□□ 0.66
CACNB1-212ENST00000622445 MIER1Q8N108 512 aa19.11■□□□□ 0.65
CACNB1-212ENST00000622445 ZNF316A6NFI3 1004 aaPredicted RBP19.09■□□□□ 0.65
CACNB1-212ENST00000622445 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.64
CACNB1-212ENST00000622445 ABCC8Q09428 1581 aa19.07■□□□□ 0.64
CACNB1-212ENST00000622445 SOGA1O94964 1423 aa19.06■□□□□ 0.64
CACNB1-212ENST00000622445 WIZO95785 1651 aa19.04■□□□□ 0.64
CACNB1-212ENST00000622445 CCDC88BA6NC98 1476 aa19.01■□□□□ 0.63
CACNB1-212ENST00000622445 CEP162Q5TB80 1403 aa18.99■□□□□ 0.63
CACNB1-212ENST00000622445 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
CACNB1-212ENST00000622445 RUSC2Q8N2Y8 1516 aa18.94■□□□□ 0.62
CACNB1-212ENST00000622445 BCANQ96GW7 911 aa18.87■□□□□ 0.61
CACNB1-212ENST00000622445 HIRIP3Q9BW71 556 aaPredicted RBP18.73■□□□□ 0.59
CACNB1-212ENST00000622445 TNIKQ9UKE5 1360 aa18.68■□□□□ 0.58
CACNB1-212ENST00000622445 P3H3Q8IVL6 736 aa18.66■□□□□ 0.58
CACNB1-212ENST00000622445 CLIP1P30622 1438 aa18.64■□□□□ 0.58
CACNB1-212ENST00000622445 KCNH8Q96L42 1107 aa18.62■□□□□ 0.57
CACNB1-212ENST00000622445 KANK4Q5T7N3 995 aaPredicted RBP18.6■□□□□ 0.57
CACNB1-212ENST00000622445 CNGB1Q14028 1251 aaPredicted RBP18.59■□□□□ 0.57
CACNB1-212ENST00000622445 FAM50AQ14320 339 aaKnown RBP18.57■□□□□ 0.56
CACNB1-212ENST00000622445 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
CACNB1-212ENST00000622445 NACADO15069 1562 aa18.57■□□□□ 0.56
CACNB1-212ENST00000622445 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
CACNB1-212ENST00000622445 GOLGA3Q08378 1498 aa18.54■□□□□ 0.56
CACNB1-212ENST00000622445 DDX10Q13206 875 aaKnown RBP18.51■□□□□ 0.55
CACNB1-212ENST00000622445 TRIM52Q96A61 297 aa18.46■□□□□ 0.55
CACNB1-212ENST00000622445 SUPT16HQ9Y5B9 1047 aaKnown RBP18.44■□□□□ 0.54
CACNB1-212ENST00000622445 SIN3AQ96ST3 1273 aa18.44■□□□□ 0.54
CACNB1-212ENST00000622445 RAPGEF2Q9Y4G8 1499 aa18.43■□□□□ 0.54
CACNB1-212ENST00000622445 FKBP8Q14318 412 aa18.4■□□□□ 0.54
CACNB1-212ENST00000622445 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
CACNB1-212ENST00000622445 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
CACNB1-212ENST00000622445 ARID3CA6NKF2 412 aa18.35■□□□□ 0.53
CACNB1-212ENST00000622445 IRX6P78412 446 aaPredicted RBP18.35■□□□□ 0.53
CACNB1-212ENST00000622445 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
CACNB1-212ENST00000622445 SMARCA4P51532 1647 aa18.33■□□□□ 0.53
CACNB1-212ENST00000622445 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
CACNB1-212ENST00000622445 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
CACNB1-212ENST00000622445 EEA1Q15075 1411 aa18.3■□□□□ 0.52
CACNB1-212ENST00000622445 NEFLP07196 543 aa18.29■□□□□ 0.52
CACNB1-212ENST00000622445 DHX57Q6P158 1386 aaKnown RBP18.26■□□□□ 0.51
CACNB1-212ENST00000622445 MYT1Q01538 1121 aa18.22■□□□□ 0.51
CACNB1-212ENST00000622445 POLR3GLQ9BT43 218 aa18.22■□□□□ 0.51
CACNB1-212ENST00000622445 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
CACNB1-212ENST00000622445 TSHZ2Q9NRE2 1034 aa18.21■□□□□ 0.51
CACNB1-212ENST00000622445 BAZ1BQ9UIG0 1483 aaKnown RBP18.19■□□□□ 0.5
CACNB1-212ENST00000622445 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
CACNB1-212ENST00000622445 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
CACNB1-212ENST00000622445 ANP32CO43423 234 aa18.12■□□□□ 0.49
CACNB1-212ENST00000622445 KIF21BO75037 1637 aa18.11■□□□□ 0.49
CACNB1-212ENST00000622445 CCNB3Q8WWL7 1395 aa18.1■□□□□ 0.49
CACNB1-212ENST00000622445 RAB3GAP2Q9H2M9 1393 aa18.09■□□□□ 0.49
CACNB1-212ENST00000622445 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
CACNB1-212ENST00000622445 ERICH6Q7L0X2 663 aa18.03■□□□□ 0.48
CACNB1-212ENST00000622445 ARAP1Q96P48 1450 aa18.03■□□□□ 0.48
CACNB1-212ENST00000622445 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
CACNB1-212ENST00000622445 RRP7BPQ9NSQ0 103 aa17.99■□□□□ 0.47
CACNB1-212ENST00000622445 ZNF326Q5BKZ1 582 aaKnown RBP17.99■□□□□ 0.47
CACNB1-212ENST00000622445 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
CACNB1-212ENST00000622445 ANP32EQ9BTT0 268 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms