RNA–Protein interactions for RNA: ENST00000399913.5

GRIK1-206, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

TSL 2 BASIC

Gene GRIK1, Length 3,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-206ENST00000399913 NISCHQ9Y2I1 1504 aa24.73■■□□□ 1.55
GRIK1-206ENST00000399913 SHROOM4Q9ULL8 1493 aa22.61■■□□□ 1.21
GRIK1-206ENST00000399913 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
GRIK1-206ENST00000399913 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
GRIK1-206ENST00000399913 PCGF6Q9BYE7 350 aa21.48■■□□□ 1.03
GRIK1-206ENST00000399913 PPARGC1BQ86YN6 1023 aaKnown RBP21.31■■□□□ 1
GRIK1-206ENST00000399913 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
GRIK1-206ENST00000399913 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
GRIK1-206ENST00000399913 LOC105371045A0A1W2PR82 267 aa21.18■□□□□ 0.98
GRIK1-206ENST00000399913 HRCP23327 699 aa21.17■□□□□ 0.98
GRIK1-206ENST00000399913 EHMT2Q96KQ7 1210 aa21.16■□□□□ 0.98
GRIK1-206ENST00000399913 FAM9AQ8IZU1 332 aaPredicted RBP20.87■□□□□ 0.93
GRIK1-206ENST00000399913 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
GRIK1-206ENST00000399913 TRIM26Q12899 539 aaPredicted RBP20.46■□□□□ 0.87
GRIK1-206ENST00000399913 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
GRIK1-206ENST00000399913 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
GRIK1-206ENST00000399913 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
GRIK1-206ENST00000399913 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
GRIK1-206ENST00000399913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.1■□□□□ 0.81
GRIK1-206ENST00000399913 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
GRIK1-206ENST00000399913 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
GRIK1-206ENST00000399913 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
GRIK1-206ENST00000399913 RSF1Q96T23 1441 aaPredicted RBP19.94■□□□□ 0.78
GRIK1-206ENST00000399913 ZEB1P37275 1124 aaPredicted RBP19.93■□□□□ 0.78
GRIK1-206ENST00000399913 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
GRIK1-206ENST00000399913 RANGAP1P46060 587 aaPredicted RBP19.78■□□□□ 0.76
GRIK1-206ENST00000399913 ABCC9O60706 1549 aa19.78■□□□□ 0.76
GRIK1-206ENST00000399913 YTHDC1Q96MU7 727 aaKnown RBP19.72■□□□□ 0.75
GRIK1-206ENST00000399913 CECR2Q9BXF3 1484 aa19.71■□□□□ 0.75
GRIK1-206ENST00000399913 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
GRIK1-206ENST00000399913 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.73
GRIK1-206ENST00000399913 DIEXFQ68CQ4 756 aaKnown RBP19.6■□□□□ 0.73
GRIK1-206ENST00000399913 GTF3C3Q9Y5Q9 886 aa19.57■□□□□ 0.72
GRIK1-206ENST00000399913 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
GRIK1-206ENST00000399913 ACIN1Q9UKV3 1341 aaKnown RBP19.49■□□□□ 0.71
GRIK1-206ENST00000399913 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
GRIK1-206ENST00000399913 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
GRIK1-206ENST00000399913 WIZO95785 1651 aa19.39■□□□□ 0.69
GRIK1-206ENST00000399913 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
GRIK1-206ENST00000399913 PELP1Q8IZL8 1130 aaKnown RBP19.38■□□□□ 0.69
GRIK1-206ENST00000399913 ABCC8Q09428 1581 aa19.33■□□□□ 0.69
GRIK1-206ENST00000399913 SOGA1O94964 1423 aa19.28■□□□□ 0.68
GRIK1-206ENST00000399913 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.68
GRIK1-206ENST00000399913 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
GRIK1-206ENST00000399913 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
GRIK1-206ENST00000399913 MIER1Q8N108 512 aa19.19■□□□□ 0.66
GRIK1-206ENST00000399913 RUSC2Q8N2Y8 1516 aa19.19■□□□□ 0.66
GRIK1-206ENST00000399913 ZNF316A6NFI3 1004 aaPredicted RBP19.18■□□□□ 0.66
GRIK1-206ENST00000399913 APLP2Q06481 763 aa19.17■□□□□ 0.66
GRIK1-206ENST00000399913 ITGAEP38570 1179 aa19.11■□□□□ 0.65
GRIK1-206ENST00000399913 NACADO15069 1562 aa18.97■□□□□ 0.63
GRIK1-206ENST00000399913 TNIKQ9UKE5 1360 aa18.93■□□□□ 0.62
GRIK1-206ENST00000399913 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
GRIK1-206ENST00000399913 CLIP1P30622 1438 aa18.82■□□□□ 0.6
GRIK1-206ENST00000399913 ATP1B4Q9UN42 357 aaPredicted RBP18.82■□□□□ 0.6
GRIK1-206ENST00000399913 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
GRIK1-206ENST00000399913 BCANQ96GW7 911 aa18.79■□□□□ 0.6
GRIK1-206ENST00000399913 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
GRIK1-206ENST00000399913 SMARCA2P51531 1590 aa18.77■□□□□ 0.6
GRIK1-206ENST00000399913 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
GRIK1-206ENST00000399913 KANK4Q5T7N3 995 aaPredicted RBP18.74■□□□□ 0.59
GRIK1-206ENST00000399913 HIRIP3Q9BW71 556 aaPredicted RBP18.72■□□□□ 0.59
GRIK1-206ENST00000399913 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
GRIK1-206ENST00000399913 KCNH8Q96L42 1107 aa18.7■□□□□ 0.58
GRIK1-206ENST00000399913 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
GRIK1-206ENST00000399913 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
GRIK1-206ENST00000399913 P3H3Q8IVL6 736 aa18.64■□□□□ 0.58
GRIK1-206ENST00000399913 EEA1Q15075 1411 aa18.6■□□□□ 0.57
GRIK1-206ENST00000399913 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
GRIK1-206ENST00000399913 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
GRIK1-206ENST00000399913 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
GRIK1-206ENST00000399913 SUPT16HQ9Y5B9 1047 aaKnown RBP18.55■□□□□ 0.56
GRIK1-206ENST00000399913 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
GRIK1-206ENST00000399913 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
GRIK1-206ENST00000399913 SIN3AQ96ST3 1273 aa18.5■□□□□ 0.55
GRIK1-206ENST00000399913 DHX57Q6P158 1386 aaKnown RBP18.48■□□□□ 0.55
GRIK1-206ENST00000399913 TRIM52Q96A61 297 aa18.46■□□□□ 0.55
GRIK1-206ENST00000399913 BAZ1BQ9UIG0 1483 aaKnown RBP18.43■□□□□ 0.54
GRIK1-206ENST00000399913 FKBP8Q14318 412 aa18.42■□□□□ 0.54
GRIK1-206ENST00000399913 KIF21BO75037 1637 aa18.4■□□□□ 0.54
GRIK1-206ENST00000399913 CNGB1Q14028 1251 aaPredicted RBP18.39■□□□□ 0.53
GRIK1-206ENST00000399913 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
GRIK1-206ENST00000399913 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.53
GRIK1-206ENST00000399913 TSHZ2Q9NRE2 1034 aa18.32■□□□□ 0.52
GRIK1-206ENST00000399913 MYT1Q01538 1121 aa18.3■□□□□ 0.52
GRIK1-206ENST00000399913 IRX6P78412 446 aaPredicted RBP18.3■□□□□ 0.52
GRIK1-206ENST00000399913 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
GRIK1-206ENST00000399913 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
GRIK1-206ENST00000399913 RAB3GAP2Q9H2M9 1393 aa18.27■□□□□ 0.51
GRIK1-206ENST00000399913 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
GRIK1-206ENST00000399913 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
GRIK1-206ENST00000399913 NEFLP07196 543 aa18.22■□□□□ 0.51
GRIK1-206ENST00000399913 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
GRIK1-206ENST00000399913 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
GRIK1-206ENST00000399913 CLSPNQ9HAW4 1339 aa18.14■□□□□ 0.49
GRIK1-206ENST00000399913 ANP32CO43423 234 aa18.14■□□□□ 0.49
GRIK1-206ENST00000399913 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
GRIK1-206ENST00000399913 CUX2O14529 1486 aa18.09■□□□□ 0.49
GRIK1-206ENST00000399913 PRXQ9BXM0 1461 aa18.09■□□□□ 0.49
GRIK1-206ENST00000399913 ARHGAP35Q9NRY4 1499 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms