RNA–Protein interactions for RNA: ENST00000506428.1

LINC01301-202, Transcript of long intergenic non-protein coding RNA 1301, humanhuman

TSL 2 BASIC

Gene LINC01301, Length 2,444 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01301-202ENST00000506428 NISCHQ9Y2I1 1504 aa25.5■■□□□ 1.67
LINC01301-202ENST00000506428 CCDC180Q9P1Z9 1646 aa22.56■■□□□ 1.2
LINC01301-202ENST00000506428 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.17
LINC01301-202ENST00000506428 ABCC9O60706 1549 aa22.29■■□□□ 1.16
LINC01301-202ENST00000506428 HRCP23327 699 aa22.04■■□□□ 1.12
LINC01301-202ENST00000506428 MYT1Q01538 1121 aa21.73■■□□□ 1.07
LINC01301-202ENST00000506428 DCAF8L2P0C7V8 631 aa21.62■■□□□ 1.05
LINC01301-202ENST00000506428 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
LINC01301-202ENST00000506428 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
LINC01301-202ENST00000506428 PCGF6Q9BYE7 350 aa21.39■■□□□ 1.01
LINC01301-202ENST00000506428 MYO15BQ96JP2 1530 aa21.36■■□□□ 1.01
LINC01301-202ENST00000506428 PPARGC1BQ86YN6 1023 aaKnown RBP21.32■■□□□ 1
LINC01301-202ENST00000506428 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
LINC01301-202ENST00000506428 RB1CC1Q8TDY2 1594 aa21.29■■□□□ 1
LINC01301-202ENST00000506428 NACADO15069 1562 aa21.23■□□□□ 0.99
LINC01301-202ENST00000506428 ZCCHC6Q5VYS8 1495 aaKnown RBP21.23■□□□□ 0.99
LINC01301-202ENST00000506428 DCAF1Q9Y4B6 1507 aa21.13■□□□□ 0.97
LINC01301-202ENST00000506428 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
LINC01301-202ENST00000506428 PABPN1Q86U42 306 aaKnown RBP eCLIP20.9■□□□□ 0.94
LINC01301-202ENST00000506428 TRIM26Q12899 539 aaPredicted RBP20.87■□□□□ 0.93
LINC01301-202ENST00000506428 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
LINC01301-202ENST00000506428 ZEB1P37275 1124 aaPredicted RBP20.8■□□□□ 0.92
LINC01301-202ENST00000506428 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
LINC01301-202ENST00000506428 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
LINC01301-202ENST00000506428 BICRAQ9NZM4 1560 aa20.66■□□□□ 0.9
LINC01301-202ENST00000506428 TTBK1Q5TCY1 1321 aaPredicted RBP20.62■□□□□ 0.89
LINC01301-202ENST00000506428 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
LINC01301-202ENST00000506428 DNAJC5BQ9UF47 199 aa20.44■□□□□ 0.86
LINC01301-202ENST00000506428 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
LINC01301-202ENST00000506428 GTF3C3Q9Y5Q9 886 aa20.25■□□□□ 0.83
LINC01301-202ENST00000506428 CENPBP07199 599 aaPredicted RBP20.15■□□□□ 0.82
LINC01301-202ENST00000506428 EIF4G1Q04637 1599 aaKnown RBP20.14■□□□□ 0.81
LINC01301-202ENST00000506428 CC2D2AQ9P2K1 1620 aa20.07■□□□□ 0.8
LINC01301-202ENST00000506428 BCL11AQ9H165 835 aa19.97■□□□□ 0.79
LINC01301-202ENST00000506428 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
LINC01301-202ENST00000506428 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
LINC01301-202ENST00000506428 DIEXFQ68CQ4 756 aaKnown RBP19.91■□□□□ 0.78
LINC01301-202ENST00000506428 CCER1Q8TC90 406 aaPredicted RBP19.83■□□□□ 0.76
LINC01301-202ENST00000506428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
LINC01301-202ENST00000506428 SMARCA4P51532 1647 aa19.79■□□□□ 0.76
LINC01301-202ENST00000506428 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
LINC01301-202ENST00000506428 FAM9AQ8IZU1 332 aaPredicted RBP19.77■□□□□ 0.76
LINC01301-202ENST00000506428 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
LINC01301-202ENST00000506428 MROH2BQ7Z745 1585 aa19.72■□□□□ 0.75
LINC01301-202ENST00000506428 ATAD2BQ9ULI0 1458 aa19.68■□□□□ 0.74
LINC01301-202ENST00000506428 ANP32EQ9BTT0 268 aa19.66■□□□□ 0.74
LINC01301-202ENST00000506428 SMARCA2P51531 1590 aa19.62■□□□□ 0.73
LINC01301-202ENST00000506428 PRKCSHP14314 528 aaPredicted RBP19.62■□□□□ 0.73
LINC01301-202ENST00000506428 NCAPD3P42695 1498 aa19.61■□□□□ 0.73
LINC01301-202ENST00000506428 ZNF316A6NFI3 1004 aaPredicted RBP19.57■□□□□ 0.72
LINC01301-202ENST00000506428 BAZ1BQ9UIG0 1483 aaKnown RBP19.56■□□□□ 0.72
LINC01301-202ENST00000506428 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
LINC01301-202ENST00000506428 WIZO95785 1651 aa19.53■□□□□ 0.72
LINC01301-202ENST00000506428 HMGXB3Q12766 1538 aa19.5■□□□□ 0.71
LINC01301-202ENST00000506428 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
LINC01301-202ENST00000506428 WRNQ14191 1432 aaPredicted RBP eCLIP19.48■□□□□ 0.71
LINC01301-202ENST00000506428 YTHDC1Q96MU7 727 aaKnown RBP19.39■□□□□ 0.69
LINC01301-202ENST00000506428 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
LINC01301-202ENST00000506428 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
LINC01301-202ENST00000506428 CSRNP3Q8WYN3 585 aa19.36■□□□□ 0.69
LINC01301-202ENST00000506428 MIER1Q8N108 512 aa19.36■□□□□ 0.69
LINC01301-202ENST00000506428 NESP48681 1621 aa19.29■□□□□ 0.68
LINC01301-202ENST00000506428 TSHZ2Q9NRE2 1034 aa19.26■□□□□ 0.67
LINC01301-202ENST00000506428 TOP2AP11388 1531 aaKnown RBP19.23■□□□□ 0.67
LINC01301-202ENST00000506428 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
LINC01301-202ENST00000506428 ERCC6Q03468 1493 aa19.19■□□□□ 0.66
LINC01301-202ENST00000506428 SUPT16HQ9Y5B9 1047 aaKnown RBP19.18■□□□□ 0.66
LINC01301-202ENST00000506428 TNIKQ9UKE5 1360 aa19.18■□□□□ 0.66
LINC01301-202ENST00000506428 APLP2Q06481 763 aa19.14■□□□□ 0.65
LINC01301-202ENST00000506428 CADPSQ9ULU8 1353 aa19.1■□□□□ 0.65
LINC01301-202ENST00000506428 LAMC3Q9Y6N6 1575 aa19.09■□□□□ 0.65
LINC01301-202ENST00000506428 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
LINC01301-202ENST00000506428 EEA1Q15075 1411 aa19.02■□□□□ 0.64
LINC01301-202ENST00000506428 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
LINC01301-202ENST00000506428 KIF21AQ7Z4S6 1674 aa19■□□□□ 0.63
LINC01301-202ENST00000506428 CFTRP13569 1480 aa18.96■□□□□ 0.63
LINC01301-202ENST00000506428 SOGA1O94964 1423 aa18.93■□□□□ 0.62
LINC01301-202ENST00000506428 ABCC8Q09428 1581 aa18.92■□□□□ 0.62
LINC01301-202ENST00000506428 HNRNPUL2Q1KMD3 747 aaKnown RBP18.92■□□□□ 0.62
LINC01301-202ENST00000506428 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
LINC01301-202ENST00000506428 UBTFP17480 764 aaKnown RBP18.9■□□□□ 0.62
LINC01301-202ENST00000506428 GOLGA3Q08378 1498 aa18.89■□□□□ 0.61
LINC01301-202ENST00000506428 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
LINC01301-202ENST00000506428 THOC2Q8NI27 1593 aaKnown RBP18.86■□□□□ 0.61
LINC01301-202ENST00000506428 CUX2O14529 1486 aa18.82■□□□□ 0.6
LINC01301-202ENST00000506428 MRC2Q9UBG0 1479 aa18.81■□□□□ 0.6
LINC01301-202ENST00000506428 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
LINC01301-202ENST00000506428 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
LINC01301-202ENST00000506428 RBM19Q9Y4C8 960 aaKnown RBP18.75■□□□□ 0.59
LINC01301-202ENST00000506428 MYT1LQ9UL68 1186 aa18.74■□□□□ 0.59
LINC01301-202ENST00000506428 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
LINC01301-202ENST00000506428 DHX57Q6P158 1386 aaKnown RBP18.72■□□□□ 0.59
LINC01301-202ENST00000506428 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
LINC01301-202ENST00000506428 WDR62O43379 1518 aa18.71■□□□□ 0.59
LINC01301-202ENST00000506428 CLIP1P30622 1438 aa18.7■□□□□ 0.58
LINC01301-202ENST00000506428 KIF21BO75037 1637 aa18.69■□□□□ 0.58
LINC01301-202ENST00000506428 MSH5O43196 834 aa18.62■□□□□ 0.57
LINC01301-202ENST00000506428 ANO8Q9HCE9 1232 aaPredicted RBP18.6■□□□□ 0.57
LINC01301-202ENST00000506428 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
LINC01301-202ENST00000506428 FKBP8Q14318 412 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms