RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 DCAF8L2P0C7V8 631 aa21.15■□□□□ 0.98
SIN3A-202ENST00000394947 EHMT2Q96KQ7 1210 aa20.33■□□□□ 0.84
SIN3A-202ENST00000394947 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
SIN3A-202ENST00000394947 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
SIN3A-202ENST00000394947 TTBK1Q5TCY1 1321 aaPredicted RBP19.6■□□□□ 0.73
SIN3A-202ENST00000394947 ERICH6Q7L0X2 663 aa19.47■□□□□ 0.71
SIN3A-202ENST00000394947 SHROOM4Q9ULL8 1493 aa19.4■□□□□ 0.7
SIN3A-202ENST00000394947 MYT1Q01538 1121 aa19.24■□□□□ 0.67
SIN3A-202ENST00000394947 RANGAP1P46060 587 aaPredicted RBP19.16■□□□□ 0.66
SIN3A-202ENST00000394947 APLP2Q06481 763 aa19.14■□□□□ 0.65
SIN3A-202ENST00000394947 FAM9AQ8IZU1 332 aaPredicted RBP19.09■□□□□ 0.65
SIN3A-202ENST00000394947 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
SIN3A-202ENST00000394947 YTHDC1Q96MU7 727 aaKnown RBP18.95■□□□□ 0.62
SIN3A-202ENST00000394947 ATP1B4Q9UN42 357 aaPredicted RBP18.9■□□□□ 0.62
SIN3A-202ENST00000394947 CCER1Q8TC90 406 aaPredicted RBP18.9■□□□□ 0.62
SIN3A-202ENST00000394947 CENPBP07199 599 aaPredicted RBP18.72■□□□□ 0.59
SIN3A-202ENST00000394947 NEFLP07196 543 aa18.58■□□□□ 0.56
SIN3A-202ENST00000394947 CNGB1Q14028 1251 aaPredicted RBP18.55■□□□□ 0.56
SIN3A-202ENST00000394947 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
SIN3A-202ENST00000394947 POLR3GLQ9BT43 218 aa18.46■□□□□ 0.55
SIN3A-202ENST00000394947 DAXXQ9UER7 740 aaPredicted RBP18.4■□□□□ 0.54
SIN3A-202ENST00000394947 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
SIN3A-202ENST00000394947 MYT1LQ9UL68 1186 aa18.24■□□□□ 0.51
SIN3A-202ENST00000394947 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
SIN3A-202ENST00000394947 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
SIN3A-202ENST00000394947 ITGAEP38570 1179 aa18.14■□□□□ 0.49
SIN3A-202ENST00000394947 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
SIN3A-202ENST00000394947 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
SIN3A-202ENST00000394947 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
SIN3A-202ENST00000394947 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
SIN3A-202ENST00000394947 CLSPNQ9HAW4 1339 aa17.96■□□□□ 0.47
SIN3A-202ENST00000394947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
SIN3A-202ENST00000394947 HNRNPUL2Q1KMD3 747 aaKnown RBP17.94■□□□□ 0.46
SIN3A-202ENST00000394947 RTL5Q5HYW3 569 aaPredicted RBP17.84■□□□□ 0.45
SIN3A-202ENST00000394947 BCANQ96GW7 911 aa17.78■□□□□ 0.44
SIN3A-202ENST00000394947 SLC24A1O60721 1099 aa17.71■□□□□ 0.43
SIN3A-202ENST00000394947 HRCP23327 699 aa17.62■□□□□ 0.41
SIN3A-202ENST00000394947 TRIM26Q12899 539 aaPredicted RBP17.47■□□□□ 0.39
SIN3A-202ENST00000394947 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
SIN3A-202ENST00000394947 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
SIN3A-202ENST00000394947 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
SIN3A-202ENST00000394947 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
SIN3A-202ENST00000394947 EIF5BO60841 1220 aaKnown RBP17.4■□□□□ 0.38
SIN3A-202ENST00000394947 ZBTB47Q9UFB7 747 aaPredicted RBP17.39■□□□□ 0.37
SIN3A-202ENST00000394947 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
SIN3A-202ENST00000394947 DIEXFQ68CQ4 756 aaKnown RBP17.35■□□□□ 0.37
SIN3A-202ENST00000394947 TRIM52Q96A61 297 aa17.34■□□□□ 0.37
SIN3A-202ENST00000394947 FAM50AQ14320 339 aaKnown RBP17.33■□□□□ 0.37
SIN3A-202ENST00000394947 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
SIN3A-202ENST00000394947 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
SIN3A-202ENST00000394947 CDK11AQ9UQ88 783 aaPredicted RBP17.24■□□□□ 0.35
SIN3A-202ENST00000394947 ARXQ96QS3 562 aa17.24■□□□□ 0.35
SIN3A-202ENST00000394947 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
SIN3A-202ENST00000394947 ANP32CO43423 234 aa17.05■□□□□ 0.32
SIN3A-202ENST00000394947 ARID3CA6NKF2 412 aa17.04■□□□□ 0.32
SIN3A-202ENST00000394947 HSP90AA1P07900 732 aaKnown RBP17■□□□□ 0.31
SIN3A-202ENST00000394947 NBR1Q14596 966 aa17■□□□□ 0.31
SIN3A-202ENST00000394947 ANP32AP39687 249 aaKnown RBP16.99■□□□□ 0.31
SIN3A-202ENST00000394947 SALL2Q9Y467 1007 aaPredicted RBP16.97■□□□□ 0.31
SIN3A-202ENST00000394947 ANP32BQ92688 251 aaKnown RBP16.94■□□□□ 0.3
SIN3A-202ENST00000394947 NEFMP07197 916 aa16.93■□□□□ 0.3
SIN3A-202ENST00000394947 FBLN2P98095 1184 aa16.91■□□□□ 0.3
SIN3A-202ENST00000394947 PLEKHG5O94827 1062 aa16.9■□□□□ 0.3
SIN3A-202ENST00000394947 TULP1O00294 542 aaPredicted RBP16.88■□□□□ 0.29
SIN3A-202ENST00000394947 A0A0G2JS52 829 aa16.87■□□□□ 0.29
SIN3A-202ENST00000394947 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
SIN3A-202ENST00000394947 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
SIN3A-202ENST00000394947 FKBP8Q14318 412 aa16.8■□□□□ 0.28
SIN3A-202ENST00000394947 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
SIN3A-202ENST00000394947 P3H3Q8IVL6 736 aa16.77■□□□□ 0.27
SIN3A-202ENST00000394947 CHGAP10645 457 aaKnown RBP16.75■□□□□ 0.27
SIN3A-202ENST00000394947 ZNF777Q9ULD5 760 aaPredicted RBP16.74■□□□□ 0.27
SIN3A-202ENST00000394947 GLIPR1L2Q4G1C9 344 aa16.71■□□□□ 0.27
SIN3A-202ENST00000394947 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
SIN3A-202ENST00000394947 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
SIN3A-202ENST00000394947 IRX6P78412 446 aaPredicted RBP16.69■□□□□ 0.26
SIN3A-202ENST00000394947 CDK11BP21127 795 aaKnown RBP16.68■□□□□ 0.26
SIN3A-202ENST00000394947 TAOK2Q9UL54 1235 aa16.68■□□□□ 0.26
SIN3A-202ENST00000394947 SENP3-EIF4A1A0A087X0R7 540 aa16.66■□□□□ 0.26
SIN3A-202ENST00000394947 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
SIN3A-202ENST00000394947 UPF2Q9HAU5 1272 aaKnown RBP16.65■□□□□ 0.26
SIN3A-202ENST00000394947 AMER1Q5JTC6 1135 aaPredicted RBP16.65■□□□□ 0.26
SIN3A-202ENST00000394947 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
SIN3A-202ENST00000394947 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
SIN3A-202ENST00000394947 HNRNPUQ00839 825 aaKnown RBP eCLIP16.59■□□□□ 0.25
SIN3A-202ENST00000394947 ESF1Q9H501 851 aaKnown RBP16.54■□□□□ 0.24
SIN3A-202ENST00000394947 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
SIN3A-202ENST00000394947 NCLP19338 710 aaKnown RBP16.51■□□□□ 0.23
SIN3A-202ENST00000394947 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
SIN3A-202ENST00000394947 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
SIN3A-202ENST00000394947 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
SIN3A-202ENST00000394947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.226e-7■■□□□ 12.5
SIN3A-202ENST00000394947 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
SIN3A-202ENST00000394947 HIRIP3Q9BW71 556 aaPredicted RBP16.44■□□□□ 0.22
SIN3A-202ENST00000394947 DNTTIP2Q5QJE6 756 aaKnown RBP16.4■□□□□ 0.22
SIN3A-202ENST00000394947 KDM2AQ9Y2K7 1162 aa16.4■□□□□ 0.22
SIN3A-202ENST00000394947 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
SIN3A-202ENST00000394947 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
SIN3A-202ENST00000394947 PTMAP06454 111 aaKnown RBP16.36■□□□□ 0.21
SIN3A-202ENST00000394947 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms