Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.79■■□□□ 1.4
VPS36Q86VN1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS36Q86VN1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS36Q86VN1 FP325331.1-202ENST00000623531 1380 ntBASIC23.78■■□□□ 1.4
VPS36Q86VN1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS36Q86VN1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS36Q86VN1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS36Q86VN1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.78■■□□□ 1.4
VPS36Q86VN1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS36Q86VN1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
VPS36Q86VN1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS36Q86VN1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS36Q86VN1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.77■■□□□ 1.4
VPS36Q86VN1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS36Q86VN1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS36Q86VN1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS36Q86VN1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
VPS36Q86VN1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS36Q86VN1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS36Q86VN1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS36Q86VN1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
VPS36Q86VN1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
VPS36Q86VN1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
VPS36Q86VN1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
VPS36Q86VN1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.76■■□□□ 1.39
VPS36Q86VN1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
VPS36Q86VN1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS36Q86VN1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VPS36Q86VN1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS36Q86VN1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS36Q86VN1 LINC00565-201ENST00000562710 2331 ntBASIC23.76■■□□□ 1.39
VPS36Q86VN1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.76■■□□□ 1.39
VPS36Q86VN1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
VPS36Q86VN1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VPS36Q86VN1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.76■■□□□ 1.39
VPS36Q86VN1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VPS36Q86VN1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS36Q86VN1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
VPS36Q86VN1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS36Q86VN1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.76■■□□□ 1.39
VPS36Q86VN1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS36Q86VN1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
VPS36Q86VN1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS36Q86VN1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
VPS36Q86VN1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS36Q86VN1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.75■■□□□ 1.39
VPS36Q86VN1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.75■■□□□ 1.39
VPS36Q86VN1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.75■■□□□ 1.39
VPS36Q86VN1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.75■■□□□ 1.39
VPS36Q86VN1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
VPS36Q86VN1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
VPS36Q86VN1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS36Q86VN1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
VPS36Q86VN1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.75■■□□□ 1.39
VPS36Q86VN1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.74■■□□□ 1.39
VPS36Q86VN1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
VPS36Q86VN1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.74■■□□□ 1.39
VPS36Q86VN1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
VPS36Q86VN1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
VPS36Q86VN1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VPS36Q86VN1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.74■■□□□ 1.39
VPS36Q86VN1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
VPS36Q86VN1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS36Q86VN1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
VPS36Q86VN1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
VPS36Q86VN1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS36Q86VN1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.73■■□□□ 1.39
VPS36Q86VN1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
VPS36Q86VN1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.73■■□□□ 1.39
VPS36Q86VN1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.73■■□□□ 1.39
VPS36Q86VN1 KRT125P-201ENST00000546827 989 ntBASIC23.73■■□□□ 1.39
VPS36Q86VN1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.73■■□□□ 1.39
VPS36Q86VN1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.73■■□□□ 1.39
VPS36Q86VN1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS36Q86VN1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS36Q86VN1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
VPS36Q86VN1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VPS36Q86VN1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.72■■□□□ 1.39
VPS36Q86VN1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS36Q86VN1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS36Q86VN1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
VPS36Q86VN1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
VPS36Q86VN1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS36Q86VN1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS36Q86VN1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
VPS36Q86VN1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS36Q86VN1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
VPS36Q86VN1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
VPS36Q86VN1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS36Q86VN1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS36Q86VN1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS36Q86VN1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
VPS36Q86VN1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS36Q86VN1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS36Q86VN1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
VPS36Q86VN1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.71■■□□□ 1.39
VPS36Q86VN1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.71■■□□□ 1.39
VPS36Q86VN1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS36Q86VN1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS36Q86VN1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms