RNA–Protein interactions for RNA: ENST00000012443.8

PPP5C-201, Transcript of protein phosphatase 5 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP5C, Length 2,109 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP5C-201ENST00000012443 NISCHQ9Y2I1 1504 aa47.04■■■■■ 5.12
PPP5C-201ENST00000012443 CCDC180Q9P1Z9 1646 aa40.6■■■■■ 4.09
PPP5C-201ENST00000012443 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
PPP5C-201ENST00000012443 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
PPP5C-201ENST00000012443 DCAF8L2P0C7V8 631 aa38.81■■■■□ 3.8
PPP5C-201ENST00000012443 DCAF1Q9Y4B6 1507 aa38.8■■■■□ 3.8
PPP5C-201ENST00000012443 MYO15BQ96JP2 1530 aa38.1■■■■□ 3.69
PPP5C-201ENST00000012443 ABCC9O60706 1549 aa38.08■■■■□ 3.69
PPP5C-201ENST00000012443 SUPT5HO00267 1087 aaKnown RBP38.02■■■■□ 3.68
PPP5C-201ENST00000012443 NACADO15069 1562 aa37.73■■■■□ 3.63
PPP5C-201ENST00000012443 SCRIBQ14160 1630 aa37.58■■■■□ 3.61
PPP5C-201ENST00000012443 RB1CC1Q8TDY2 1594 aa37.26■■■■□ 3.56
PPP5C-201ENST00000012443 CHIC1Q5VXU3 224 aa36.92■■■■□ 3.5
PPP5C-201ENST00000012443 RSF1Q96T23 1441 aaPredicted RBP36.78■■■■□ 3.48
PPP5C-201ENST00000012443 UNC13AQ9UPW8 1703 aa36.63■■■■□ 3.45
PPP5C-201ENST00000012443 CECR2Q9BXF3 1484 aa36.61■■■■□ 3.45
PPP5C-201ENST00000012443 MROH2BQ7Z745 1585 aa36.43■■■■□ 3.42
PPP5C-201ENST00000012443 BICRAQ9NZM4 1560 aa36.25■■■■□ 3.39
PPP5C-201ENST00000012443 BAZ1AQ9NRL2 1556 aaPredicted RBP36.22■■■■□ 3.39
PPP5C-201ENST00000012443 WIZO95785 1651 aa36.15■■■■□ 3.38
PPP5C-201ENST00000012443 PABPN1Q86U42 306 aaKnown RBP eCLIP36.11■■■■□ 3.373e-11■■■■□ 22.2
PPP5C-201ENST00000012443 SMARCA4P51532 1647 aa36.01■■■■□ 3.36
PPP5C-201ENST00000012443 TOP2AP11388 1531 aaKnown RBP35.7■■■■□ 3.31
PPP5C-201ENST00000012443 LOC105371045A0A1W2PR82 267 aa35.66■■■■□ 3.3
PPP5C-201ENST00000012443 TRIM41Q8WV44 630 aa35.56■■■■□ 3.28
PPP5C-201ENST00000012443 PEG3Q9GZU2 1588 aa35.53■■■■□ 3.28
PPP5C-201ENST00000012443 CCDC88BA6NC98 1476 aa35.44■■■■□ 3.26
PPP5C-201ENST00000012443 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
PPP5C-201ENST00000012443 EIF4G1Q04637 1599 aaKnown RBP35.38■■■■□ 3.25
PPP5C-201ENST00000012443 ATAD2BQ9ULI0 1458 aa35.32■■■■□ 3.24
PPP5C-201ENST00000012443 PCGF6Q9BYE7 350 aa35.21■■■■□ 3.23
PPP5C-201ENST00000012443 BAZ1BQ9UIG0 1483 aaKnown RBP35.12■■■■□ 3.21
PPP5C-201ENST00000012443 FAM9AQ8IZU1 332 aaPredicted RBP35.09■■■■□ 3.21
PPP5C-201ENST00000012443 HRCP23327 699 aa35.06■■■■□ 3.2
PPP5C-201ENST00000012443 ABCC8Q09428 1581 aa34.91■■■■□ 3.18
PPP5C-201ENST00000012443 NCAPD3P42695 1498 aa34.89■■■■□ 3.18
PPP5C-201ENST00000012443 HMGXB3Q12766 1538 aa34.83■■■■□ 3.17
PPP5C-201ENST00000012443 TRIM26Q12899 539 aaPredicted RBP34.79■■■■□ 3.16
PPP5C-201ENST00000012443 EHMT2Q96KQ7 1210 aa34.67■■■■□ 3.14
PPP5C-201ENST00000012443 WRNQ14191 1432 aaPredicted RBP eCLIP34.55■■■■□ 3.12
PPP5C-201ENST00000012443 CC2D2AQ9P2K1 1620 aa34.43■■■■□ 3.1
PPP5C-201ENST00000012443 SYNJ1O43426 1573 aa34.42■■■■□ 3.1
PPP5C-201ENST00000012443 SOGA1O94964 1423 aa34.41■■■■□ 3.1
PPP5C-201ENST00000012443 EEA1Q15075 1411 aa34.35■■■■□ 3.09
PPP5C-201ENST00000012443 CFTRP13569 1480 aa34.29■■■■□ 3.08
PPP5C-201ENST00000012443 RUSC2Q8N2Y8 1516 aa34.27■■■■□ 3.08
PPP5C-201ENST00000012443 PPARGC1BQ86YN6 1023 aaKnown RBP34.22■■■■□ 3.07
PPP5C-201ENST00000012443 TOP2BQ02880 1626 aa34.17■■■■□ 3.06
PPP5C-201ENST00000012443 CSRNP3Q8WYN3 585 aa34.16■■■■□ 3.06
PPP5C-201ENST00000012443 TNIKQ9UKE5 1360 aa34.12■■■■□ 3.05
PPP5C-201ENST00000012443 BIVM-ERCC5R4GMW8 1640 aa34.1■■■■□ 3.05
PPP5C-201ENST00000012443 CEP162Q5TB80 1403 aa34.1■■■■□ 3.05
PPP5C-201ENST00000012443 CADPSQ9ULU8 1353 aa34.06■■■■□ 3.04
PPP5C-201ENST00000012443 PRDM2Q13029 1718 aa34.03■■■■□ 3.04
PPP5C-201ENST00000012443 GOLGA3Q08378 1498 aa34.02■■■■□ 3.04
PPP5C-201ENST00000012443 CUX1P39880 1505 aa34■■■■□ 3.03
PPP5C-201ENST00000012443 KIF21BO75037 1637 aa33.92■■■■□ 3.02
PPP5C-201ENST00000012443 ZEB1P37275 1124 aaPredicted RBP33.9■■■■□ 3.02
PPP5C-201ENST00000012443 CEP164Q9UPV0 1460 aa33.89■■■■□ 3.02
PPP5C-201ENST00000012443 UBTFP17480 764 aaKnown RBP33.89■■■■□ 3.02
PPP5C-201ENST00000012443 FANCD2Q9BXW9 1451 aa33.68■■■□□ 2.98
PPP5C-201ENST00000012443 NESP48681 1621 aa33.66■■■□□ 2.98
PPP5C-201ENST00000012443 RAPGEF2Q9Y4G8 1499 aa33.64■■■□□ 2.98
PPP5C-201ENST00000012443 DNAJC5BQ9UF47 199 aa33.62■■■□□ 2.97
PPP5C-201ENST00000012443 KIF27Q86VH2 1401 aa33.6■■■□□ 2.97
PPP5C-201ENST00000012443 PRXQ9BXM0 1461 aa33.56■■■□□ 2.96
PPP5C-201ENST00000012443 CLIP1P30622 1438 aa33.56■■■□□ 2.96
PPP5C-201ENST00000012443 LAMC3Q9Y6N6 1575 aa33.55■■■□□ 2.96
PPP5C-201ENST00000012443 FGD5Q6ZNL6 1462 aa33.52■■■□□ 2.96
PPP5C-201ENST00000012443 ERICH3Q5RHP9 1530 aa33.49■■■□□ 2.95
PPP5C-201ENST00000012443 TTBK1Q5TCY1 1321 aaPredicted RBP33.48■■■□□ 2.95
PPP5C-201ENST00000012443 DNMBPQ6XZF7 1577 aa33.43■■■□□ 2.94
PPP5C-201ENST00000012443 CUX2O14529 1486 aa33.42■■■□□ 2.94
PPP5C-201ENST00000012443 VPS8Q8N3P4 1428 aa33.41■■■□□ 2.94
PPP5C-201ENST00000012443 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
PPP5C-201ENST00000012443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.36■■■□□ 2.93
PPP5C-201ENST00000012443 IGF1RP08069 1367 aa33.33■■■□□ 2.93
PPP5C-201ENST00000012443 PDS5BQ9NTI5 1447 aa33.29■■■□□ 2.92
PPP5C-201ENST00000012443 CCER1Q8TC90 406 aaPredicted RBP33.29■■■□□ 2.92
PPP5C-201ENST00000012443 POLA1P09884 1462 aaPredicted RBP33.29■■■□□ 2.92
PPP5C-201ENST00000012443 URB2Q14146 1524 aaKnown RBP33.26■■■□□ 2.91
PPP5C-201ENST00000012443 RAD54L2Q9Y4B4 1467 aa33.23■■■□□ 2.91
PPP5C-201ENST00000012443 ABCA10Q8WWZ4 1543 aa33.21■■■□□ 2.91
PPP5C-201ENST00000012443 KIF21AQ7Z4S6 1674 aa33.16■■■□□ 2.9
PPP5C-201ENST00000012443 RANGAP1P46060 587 aaPredicted RBP33.16■■■□□ 2.9
PPP5C-201ENST00000012443 CARMIL1Q5VZK9 1371 aa33.13■■■□□ 2.89
PPP5C-201ENST00000012443 ARAP1Q96P48 1450 aa33.11■■■□□ 2.89
PPP5C-201ENST00000012443 APLP2Q06481 763 aa33.08■■■□□ 2.89
PPP5C-201ENST00000012443 WDR97A6NE52 1622 aa33.02■■■□□ 2.88
PPP5C-201ENST00000012443 ARHGAP35Q9NRY4 1499 aa32.92■■■□□ 2.86
PPP5C-201ENST00000012443 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
PPP5C-201ENST00000012443 TDRD9Q8NDG6 1382 aaKnown RBP32.87■■■□□ 2.85
PPP5C-201ENST00000012443 CUL7Q14999 1698 aa32.87■■■□□ 2.85
PPP5C-201ENST00000012443 HNRNPUL2Q1KMD3 747 aaKnown RBP32.84■■■□□ 2.85
PPP5C-201ENST00000012443 MRC2Q9UBG0 1479 aa32.84■■■□□ 2.85
PPP5C-201ENST00000012443 TARBP1Q13395 1621 aaKnown RBP32.83■■■□□ 2.85
PPP5C-201ENST00000012443 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
PPP5C-201ENST00000012443 KANK4Q5T7N3 995 aaPredicted RBP32.72■■■□□ 2.83
PPP5C-201ENST00000012443 WDR62O43379 1518 aa32.65■■■□□ 2.82
PPP5C-201ENST00000012443 CTTNBP2Q8WZ74 1663 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms