Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
VPS36Q86VN1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.82■■■■□ 3.32
VPS36Q86VN1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.39■■■■□ 3.26
VPS36Q86VN1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC35.36■■■■□ 3.25
VPS36Q86VN1 AL356512.1-201ENST00000607453 1739 ntBASIC35.35■■■■□ 3.25
VPS36Q86VN1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.31■■■■□ 3.24
VPS36Q86VN1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.14■■■■□ 3.22
VPS36Q86VN1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.91■■■■□ 3.18
VPS36Q86VN1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
VPS36Q86VN1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.71■■■■□ 3.15
VPS36Q86VN1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.58■■■■□ 3.13
VPS36Q86VN1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
VPS36Q86VN1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.33■■■■□ 3.09
VPS36Q86VN1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
VPS36Q86VN1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.88■■■■□ 3.01
VPS36Q86VN1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
VPS36Q86VN1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.83■■■■□ 3.01
VPS36Q86VN1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.7■■■□□ 2.99
VPS36Q86VN1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
VPS36Q86VN1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.62■■■□□ 2.97
VPS36Q86VN1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.56■■■□□ 2.96
VPS36Q86VN1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
VPS36Q86VN1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.32■■■□□ 2.92
VPS36Q86VN1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
VPS36Q86VN1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
VPS36Q86VN1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
VPS36Q86VN1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
VPS36Q86VN1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.06■■■□□ 2.88
VPS36Q86VN1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.88■■■□□ 2.85
VPS36Q86VN1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.87■■■□□ 2.85
VPS36Q86VN1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
VPS36Q86VN1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
VPS36Q86VN1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
VPS36Q86VN1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.78■■■□□ 2.84
VPS36Q86VN1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.76■■■□□ 2.84
VPS36Q86VN1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.7■■■□□ 2.83
VPS36Q86VN1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.68■■■□□ 2.82
VPS36Q86VN1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
VPS36Q86VN1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.57■■■□□ 2.8
VPS36Q86VN1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
VPS36Q86VN1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
VPS36Q86VN1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.34■■■□□ 2.77
VPS36Q86VN1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
VPS36Q86VN1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
VPS36Q86VN1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
VPS36Q86VN1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
VPS36Q86VN1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.2■■■□□ 2.75
VPS36Q86VN1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.1■■■□□ 2.73
VPS36Q86VN1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
VPS36Q86VN1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.07■■■□□ 2.72
VPS36Q86VN1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
VPS36Q86VN1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.99■■■□□ 2.71
VPS36Q86VN1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
VPS36Q86VN1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.92■■■□□ 2.7
VPS36Q86VN1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VPS36Q86VN1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
VPS36Q86VN1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
VPS36Q86VN1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
VPS36Q86VN1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
VPS36Q86VN1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
VPS36Q86VN1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
VPS36Q86VN1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
VPS36Q86VN1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
VPS36Q86VN1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
VPS36Q86VN1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
VPS36Q86VN1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
VPS36Q86VN1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
VPS36Q86VN1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
VPS36Q86VN1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
VPS36Q86VN1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
VPS36Q86VN1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
VPS36Q86VN1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.37■■■□□ 2.61
VPS36Q86VN1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
VPS36Q86VN1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
VPS36Q86VN1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
VPS36Q86VN1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
VPS36Q86VN1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
VPS36Q86VN1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.25■■■□□ 2.59
VPS36Q86VN1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
VPS36Q86VN1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
VPS36Q86VN1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
VPS36Q86VN1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
VPS36Q86VN1 AC145285.7-201ENST00000614819 1539 ntBASIC31.19■■■□□ 2.58
VPS36Q86VN1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
VPS36Q86VN1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.15■■■□□ 2.58
VPS36Q86VN1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
VPS36Q86VN1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.05■■■□□ 2.56
VPS36Q86VN1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
VPS36Q86VN1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
VPS36Q86VN1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
VPS36Q86VN1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
VPS36Q86VN1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
VPS36Q86VN1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
VPS36Q86VN1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
VPS36Q86VN1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.95■■■□□ 2.55
VPS36Q86VN1 AC015813.7-201ENST00000623294 581 ntBASIC30.95■■■□□ 2.55
VPS36Q86VN1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.93■■■□□ 2.54
VPS36Q86VN1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
VPS36Q86VN1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
VPS36Q86VN1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms