Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AC002350.2-201ENST00000623894 1828 ntBASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 IGHV3-37-201ENST00000518544 340 ntBASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AL022323.5-201ENST00000624101 2059 ntBASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 GUCY2EP-203ENST00000531117 1918 ntBASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AL031719.1-201ENST00000623365 2587 ntBASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AC104758.3-203ENST00000562938 2123 ntBASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 AC012362.1-201ENST00000434906 739 ntBASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD3Q7Z3D4 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms