RNA–Protein interactions for RNA: ENST00000299961.5

HTR3A-201, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-201ENST00000299961 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
HTR3A-201ENST00000299961 CCDC180Q9P1Z9 1646 aa25.37■■□□□ 1.65
HTR3A-201ENST00000299961 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
HTR3A-201ENST00000299961 SHROOM4Q9ULL8 1493 aa24.5■■□□□ 1.51
HTR3A-201ENST00000299961 DCAF1Q9Y4B6 1507 aa24.32■■□□□ 1.48
HTR3A-201ENST00000299961 DCAF8L2P0C7V8 631 aa24.11■■□□□ 1.45
HTR3A-201ENST00000299961 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
HTR3A-201ENST00000299961 MYO15BQ96JP2 1530 aa23.78■■□□□ 1.4
HTR3A-201ENST00000299961 ABCC9O60706 1549 aa23.59■■□□□ 1.37
HTR3A-201ENST00000299961 NACADO15069 1562 aa23.46■■□□□ 1.35
HTR3A-201ENST00000299961 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
HTR3A-201ENST00000299961 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
HTR3A-201ENST00000299961 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
HTR3A-201ENST00000299961 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
HTR3A-201ENST00000299961 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
HTR3A-201ENST00000299961 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
HTR3A-201ENST00000299961 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
HTR3A-201ENST00000299961 UNC13AQ9UPW8 1703 aa22.67■■□□□ 1.22
HTR3A-201ENST00000299961 WIZO95785 1651 aa22.62■■□□□ 1.21
HTR3A-201ENST00000299961 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
HTR3A-201ENST00000299961 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
HTR3A-201ENST00000299961 TOP2AP11388 1531 aaKnown RBP22.42■■□□□ 1.18
HTR3A-201ENST00000299961 BICRAQ9NZM4 1560 aa22.36■■□□□ 1.17
HTR3A-201ENST00000299961 LOC105371045A0A1W2PR82 267 aa22.34■■□□□ 1.17
HTR3A-201ENST00000299961 EIF4G1Q04637 1599 aaKnown RBP22.3■■□□□ 1.16
HTR3A-201ENST00000299961 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
HTR3A-201ENST00000299961 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
HTR3A-201ENST00000299961 CCDC88BA6NC98 1476 aa22.18■■□□□ 1.14
HTR3A-201ENST00000299961 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
HTR3A-201ENST00000299961 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
HTR3A-201ENST00000299961 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
HTR3A-201ENST00000299961 HRCP23327 699 aa22.01■■□□□ 1.11
HTR3A-201ENST00000299961 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
HTR3A-201ENST00000299961 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
HTR3A-201ENST00000299961 TRIM26Q12899 539 aaPredicted RBP21.91■■□□□ 1.1
HTR3A-201ENST00000299961 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
HTR3A-201ENST00000299961 EEA1Q15075 1411 aa21.79■■□□□ 1.08
HTR3A-201ENST00000299961 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
HTR3A-201ENST00000299961 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
HTR3A-201ENST00000299961 HMGXB3Q12766 1538 aa21.68■■□□□ 1.06
HTR3A-201ENST00000299961 SOGA1O94964 1423 aa21.64■■□□□ 1.06
HTR3A-201ENST00000299961 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
HTR3A-201ENST00000299961 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
HTR3A-201ENST00000299961 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
HTR3A-201ENST00000299961 TNIKQ9UKE5 1360 aa21.56■■□□□ 1.04
HTR3A-201ENST00000299961 GOLGA3Q08378 1498 aa21.52■■□□□ 1.04
HTR3A-201ENST00000299961 RUSC2Q8N2Y8 1516 aa21.51■■□□□ 1.03
HTR3A-201ENST00000299961 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
HTR3A-201ENST00000299961 KIF21BO75037 1637 aa21.47■■□□□ 1.03
HTR3A-201ENST00000299961 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
HTR3A-201ENST00000299961 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.02
HTR3A-201ENST00000299961 BIVM-ERCC5R4GMW8 1640 aa21.45■■□□□ 1.02
HTR3A-201ENST00000299961 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
HTR3A-201ENST00000299961 UBTFP17480 764 aaKnown RBP21.39■■□□□ 1.01
HTR3A-201ENST00000299961 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
HTR3A-201ENST00000299961 PPARGC1BQ86YN6 1023 aaKnown RBP21.34■■□□□ 1.01
HTR3A-201ENST00000299961 PRDM2Q13029 1718 aa21.33■■□□□ 1.01
HTR3A-201ENST00000299961 CFTRP13569 1480 aa21.33■■□□□ 1.01
HTR3A-201ENST00000299961 CUX1P39880 1505 aa21.24■□□□□ 0.99
HTR3A-201ENST00000299961 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.98
HTR3A-201ENST00000299961 CLIP1P30622 1438 aa21.19■□□□□ 0.98
HTR3A-201ENST00000299961 RAPGEF2Q9Y4G8 1499 aa21.18■□□□□ 0.98
HTR3A-201ENST00000299961 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
HTR3A-201ENST00000299961 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
HTR3A-201ENST00000299961 PRXQ9BXM0 1461 aa21.12■□□□□ 0.97
HTR3A-201ENST00000299961 VPS8Q8N3P4 1428 aa21.1■□□□□ 0.97
HTR3A-201ENST00000299961 TTBK1Q5TCY1 1321 aaPredicted RBP20.98■□□□□ 0.95
HTR3A-201ENST00000299961 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
HTR3A-201ENST00000299961 APLP2Q06481 763 aa20.95■□□□□ 0.94
HTR3A-201ENST00000299961 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
HTR3A-201ENST00000299961 CUX2O14529 1486 aa20.92■□□□□ 0.94
HTR3A-201ENST00000299961 FANCD2Q9BXW9 1451 aa20.92■□□□□ 0.94
HTR3A-201ENST00000299961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
HTR3A-201ENST00000299961 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
HTR3A-201ENST00000299961 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
HTR3A-201ENST00000299961 DNMBPQ6XZF7 1577 aa20.86■□□□□ 0.93
HTR3A-201ENST00000299961 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.93
HTR3A-201ENST00000299961 IGF1RP08069 1367 aa20.82■□□□□ 0.92
HTR3A-201ENST00000299961 LAMC3Q9Y6N6 1575 aa20.81■□□□□ 0.92
HTR3A-201ENST00000299961 TOPBP1Q92547 1522 aa20.76■□□□□ 0.91
HTR3A-201ENST00000299961 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
HTR3A-201ENST00000299961 ARHGAP35Q9NRY4 1499 aa20.75■□□□□ 0.91
HTR3A-201ENST00000299961 ABCA10Q8WWZ4 1543 aa20.74■□□□□ 0.91
HTR3A-201ENST00000299961 NESP48681 1621 aa20.72■□□□□ 0.91
HTR3A-201ENST00000299961 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
HTR3A-201ENST00000299961 CUL7Q14999 1698 aa20.67■□□□□ 0.9
HTR3A-201ENST00000299961 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
HTR3A-201ENST00000299961 RAD54L2Q9Y4B4 1467 aa20.64■□□□□ 0.89
HTR3A-201ENST00000299961 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
HTR3A-201ENST00000299961 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
HTR3A-201ENST00000299961 MAP3K1Q13233 1512 aa20.62■□□□□ 0.89
HTR3A-201ENST00000299961 URB2Q14146 1524 aaKnown RBP20.6■□□□□ 0.89
HTR3A-201ENST00000299961 RRBP1Q9P2E9 1410 aaKnown RBP20.57■□□□□ 0.88
HTR3A-201ENST00000299961 FHAD1B1AJZ9 1412 aa20.56■□□□□ 0.88
HTR3A-201ENST00000299961 KANK4Q5T7N3 995 aaPredicted RBP20.55■□□□□ 0.88
HTR3A-201ENST00000299961 EFCAB5A4FU69 1503 aa20.55■□□□□ 0.88
HTR3A-201ENST00000299961 CTTNBP2Q8WZ74 1663 aa20.55■□□□□ 0.88
HTR3A-201ENST00000299961 TIAM1Q13009 1591 aa20.54■□□□□ 0.88
HTR3A-201ENST00000299961 ABCA5Q8WWZ7 1642 aa20.52■□□□□ 0.88
HTR3A-201ENST00000299961 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms