RNA–Protein interactions for RNA: ENST00000534160.1

GMDS-AS1-212, humanhuman

TSL 3 BASIC

Gene GMDS-AS1, Length 720 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-AS1-212ENST00000534160 AEBP2Q6ZN18 517 aaPredicted RBP36.51■■■■□ 3.44
GMDS-AS1-212ENST00000534160 CHIC1Q5VXU3 224 aa36■■■■□ 3.35
GMDS-AS1-212ENST00000534160 PHF23Q9BUL5 403 aaPredicted RBP31.64■■■□□ 2.66
GMDS-AS1-212ENST00000534160 SENP3Q9H4L4 574 aaPredicted RBP31.03■■■□□ 2.56
GMDS-AS1-212ENST00000534160 PLPPR3Q6T4P5 718 aa29.4■■■□□ 2.3
GMDS-AS1-212ENST00000534160 FOXD1Q16676 465 aa28.7■■■□□ 2.18
GMDS-AS1-212ENST00000534160 ADRA2BP18089 450 aa27.83■■■□□ 2.05
GMDS-AS1-212ENST00000534160 PPP6R1Q9UPN7 881 aa27.81■■■□□ 2.04
GMDS-AS1-212ENST00000534160 PIAS4Q8N2W9 510 aaPredicted RBP27.17■■□□□ 1.94
GMDS-AS1-212ENST00000534160 MSH5O43196 834 aa26.43■■□□□ 1.82
GMDS-AS1-212ENST00000534160 PPP4R3CPQ6ZMV5 832 aa25.91■■□□□ 1.74
GMDS-AS1-212ENST00000534160 KCNA4P22459 653 aa25.61■■□□□ 1.69
GMDS-AS1-212ENST00000534160 SCAF1Q9H7N4 1312 aaKnown RBP25.57■■□□□ 1.68
GMDS-AS1-212ENST00000534160 NCBP3Q53F19 620 aaKnown RBP25.38■■□□□ 1.65
GMDS-AS1-212ENST00000534160 CNKSR2Q8WXI2 1034 aa25.15■■□□□ 1.62
GMDS-AS1-212ENST00000534160 MAPK8IP2Q13387 824 aaPredicted RBP25.14■■□□□ 1.62
GMDS-AS1-212ENST00000534160 NPM3O75607 178 aaKnown RBP24.93■■□□□ 1.58
GMDS-AS1-212ENST00000534160 DMRT2Q9Y5R5 561 aa24.79■■□□□ 1.56
GMDS-AS1-212ENST00000534160 RNF216Q9NWF9 866 aaPredicted RBP24.58■■□□□ 1.53
GMDS-AS1-212ENST00000534160 SLC4A1APQ9BWU0 796 aaKnown RBP24.48■■□□□ 1.51
GMDS-AS1-212ENST00000534160 HOXD11P31277 338 aaPredicted RBP24.39■■□□□ 1.49
GMDS-AS1-212ENST00000534160 DNAJC5BQ9UF47 199 aa24.2■■□□□ 1.46
GMDS-AS1-212ENST00000534160 EHMT2Q96KQ7 1210 aa24.09■■□□□ 1.45
GMDS-AS1-212ENST00000534160 DCAF8L1A6NGE4 600 aa23.72■■□□□ 1.39
GMDS-AS1-212ENST00000534160 CSRNP3Q8WYN3 585 aa23.67■■□□□ 1.38
GMDS-AS1-212ENST00000534160 FOXD4L1Q9NU39 408 aa23.54■■□□□ 1.36
GMDS-AS1-212ENST00000534160 ZBTB22O15209 634 aa23.53■■□□□ 1.36
GMDS-AS1-212ENST00000534160 POTEDQ86YR6 584 aa23.49■■□□□ 1.35
GMDS-AS1-212ENST00000534160 SLC4A2P04920 1241 aa23.45■■□□□ 1.34
GMDS-AS1-212ENST00000534160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.32
GMDS-AS1-212ENST00000534160 MYCNP04198 464 aaPredicted RBP23.08■■□□□ 1.29
GMDS-AS1-212ENST00000534160 U3KPZ7 1027 aaPredicted RBP22.89■■□□□ 1.25
GMDS-AS1-212ENST00000534160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.79■■□□□ 1.24
GMDS-AS1-212ENST00000534160 HNRNPUL2Q1KMD3 747 aaKnown RBP22.79■■□□□ 1.24
GMDS-AS1-212ENST00000534160 ATXN8OSP0DMR3 200 aa22.71■■□□□ 1.23
GMDS-AS1-212ENST00000534160 SAMD1Q6SPF0 538 aaPredicted RBP22.7■■□□□ 1.22
GMDS-AS1-212ENST00000534160 RNF39Q9H2S5 420 aa22.63■■□□□ 1.21
GMDS-AS1-212ENST00000534160 APLP2Q06481 763 aa22.51■■□□□ 1.19
GMDS-AS1-212ENST00000534160 C1QBPQ07021 282 aaKnown RBP22.42■■□□□ 1.18
GMDS-AS1-212ENST00000534160 ATF5Q9Y2D1 282 aaPredicted RBP22.34■■□□□ 1.17
GMDS-AS1-212ENST00000534160 SPINK5Q9NQ38 1064 aaPredicted RBP22.15■■□□□ 1.14
GMDS-AS1-212ENST00000534160 CAPN15O75808 1086 aa22.1■■□□□ 1.13
GMDS-AS1-212ENST00000534160 ZNF219Q9P2Y4 722 aaPredicted RBP22.1■■□□□ 1.13
GMDS-AS1-212ENST00000534160 TRHP20396 242 aaPredicted RBP22.05■■□□□ 1.12
GMDS-AS1-212ENST00000534160 CACNB1Q02641 598 aaPredicted RBP21.86■■□□□ 1.09
GMDS-AS1-212ENST00000534160 POLA2Q14181 598 aa21.75■■□□□ 1.07
GMDS-AS1-212ENST00000534160 ABCB7O75027 752 aa21.67■■□□□ 1.06
GMDS-AS1-212ENST00000534160 DSG3P32926 999 aa21.63■■□□□ 1.05
GMDS-AS1-212ENST00000534160 FBLN2P98095 1184 aa21.51■■□□□ 1.03
GMDS-AS1-212ENST00000534160 ZBTB12Q9Y330 459 aaPredicted RBP21.49■■□□□ 1.03
GMDS-AS1-212ENST00000534160 MKRN4PQ13434 485 aaPredicted RBP21.41■■□□□ 1.02
GMDS-AS1-212ENST00000534160 FKBP8Q14318 412 aa21.41■■□□□ 1.02
GMDS-AS1-212ENST00000534160 SPDYE4A6NLX3 237 aa21.13■□□□□ 0.97
GMDS-AS1-212ENST00000534160 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
GMDS-AS1-212ENST00000534160 SPDYE2BA6NHP3 402 aa20.91■□□□□ 0.94
GMDS-AS1-212ENST00000534160 SPDYE6P0CI01 402 aa20.91■□□□□ 0.94
GMDS-AS1-212ENST00000534160 SPDYE2Q495Y8 402 aa20.91■□□□□ 0.94
GMDS-AS1-212ENST00000534160 ZNF692Q9BU19 519 aaPredicted RBP20.85■□□□□ 0.93
GMDS-AS1-212ENST00000534160 PROM2Q8N271 834 aa20.79■□□□□ 0.92
GMDS-AS1-212ENST00000534160 SSUH2Q9Y2M2 353 aa20.74■□□□□ 0.91
GMDS-AS1-212ENST00000534160 RBM42Q9BTD8 480 aaKnown RBP20.68■□□□□ 0.9
GMDS-AS1-212ENST00000534160 FBXO3Q9UK99 471 aa20.64■□□□□ 0.89
GMDS-AS1-212ENST00000534160 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
GMDS-AS1-212ENST00000534160 AKT1S1Q96B36 256 aa20.46■□□□□ 0.87
GMDS-AS1-212ENST00000534160 STAG3Q9UJ98 1225 aa20.35■□□□□ 0.85
GMDS-AS1-212ENST00000534160 VASPP50552 380 aaPredicted RBP20.3■□□□□ 0.84
GMDS-AS1-212ENST00000534160 REM2Q8IYK8 340 aaPredicted RBP20.23■□□□□ 0.83
GMDS-AS1-212ENST00000534160 SPDYE1Q8NFV5 336 aaPredicted RBP20.23■□□□□ 0.83
GMDS-AS1-212ENST00000534160 CLEC11AQ9Y240 323 aa20.09■□□□□ 0.81
GMDS-AS1-212ENST00000534160 AMER1Q5JTC6 1135 aaPredicted RBP20.06■□□□□ 0.8
GMDS-AS1-212ENST00000534160 PLCD3Q8N3E9 789 aa20.04■□□□□ 0.8
GMDS-AS1-212ENST00000534160 MIER1Q8N108 512 aa20.01■□□□□ 0.79
GMDS-AS1-212ENST00000534160 IFNLR1Q8IU57 520 aaPredicted RBP20■□□□□ 0.79
GMDS-AS1-212ENST00000534160 PITPNM1O00562 1244 aa19.98■□□□□ 0.79
GMDS-AS1-212ENST00000534160 PRR29P0C7W0 189 aa19.97■□□□□ 0.79
GMDS-AS1-212ENST00000534160 PLEKHG5O94827 1062 aa19.96■□□□□ 0.79
GMDS-AS1-212ENST00000534160 RTN4Q9NQC3 1192 aaKnown RBP19.93■□□□□ 0.78
GMDS-AS1-212ENST00000534160 KLHL34Q8N239 644 aa19.92■□□□□ 0.78
GMDS-AS1-212ENST00000534160 ZBTB47Q9UFB7 747 aaPredicted RBP19.84■□□□□ 0.77
GMDS-AS1-212ENST00000534160 SPOCK2Q92563 424 aa19.78■□□□□ 0.76
GMDS-AS1-212ENST00000534160 CREBZFQ9NS37 354 aa19.73■□□□□ 0.75
GMDS-AS1-212ENST00000534160 CHRDL2Q6WN34 429 aa19.65■□□□□ 0.74
GMDS-AS1-212ENST00000534160 FXR2P51116 673 aaKnown RBP eCLIP19.56■□□□□ 0.72
GMDS-AS1-212ENST00000534160 MNX1P50219 401 aaPredicted RBP19.54■□□□□ 0.72
GMDS-AS1-212ENST00000534160 CHADLQ6NUI6 762 aa19.53■□□□□ 0.72
GMDS-AS1-212ENST00000534160 PRKAR2AP13861 404 aaKnown RBP19.5■□□□□ 0.71
GMDS-AS1-212ENST00000534160 NPM1P06748 294 aaKnown RBP eCLIP19.49■□□□□ 0.71
GMDS-AS1-212ENST00000534160 PIP4P2Q8N4L2 257 aa19.45■□□□□ 0.7
GMDS-AS1-212ENST00000534160 NUBP1P53384 320 aa19.44■□□□□ 0.7
GMDS-AS1-212ENST00000534160 PKD2Q13563 968 aa19.44■□□□□ 0.7
GMDS-AS1-212ENST00000534160 FARP1Q9Y4F1 1045 aaPredicted RBP19.42■□□□□ 0.7
GMDS-AS1-212ENST00000534160 CIZ1Q9ULV3 898 aaPredicted RBP19.41■□□□□ 0.7
GMDS-AS1-212ENST00000534160 GSE1Q14687 1217 aa19.36■□□□□ 0.69
GMDS-AS1-212ENST00000534160 FAM212AQ96EL1 285 aa19.34■□□□□ 0.69
GMDS-AS1-212ENST00000534160 ECM2O94769 699 aaPredicted RBP19.31■□□□□ 0.68
GMDS-AS1-212ENST00000534160 DCAF8Q5TAQ9 597 aa19.31■□□□□ 0.68
GMDS-AS1-212ENST00000534160 RASEFQ8IZ41 740 aa19.29■□□□□ 0.68
GMDS-AS1-212ENST00000534160 TRIM41Q8WV44 630 aa19.28■□□□□ 0.68
GMDS-AS1-212ENST00000534160 DCAF8L2P0C7V8 631 aa19.14■□□□□ 0.65
GMDS-AS1-212ENST00000534160 TSPYL2Q9H2G4 693 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms