RNA–Protein interactions for RNA: ENST00000407627.6

ELAVL1-201, Transcript of ELAV like RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELAVL1, Length 6,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELAVL1-201ENST00000407627 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
ELAVL1-201ENST00000407627 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.48
ELAVL1-201ENST00000407627 SUPT5HO00267 1087 aaKnown RBP23.06■■□□□ 1.28
ELAVL1-201ENST00000407627 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
ELAVL1-201ENST00000407627 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
ELAVL1-201ENST00000407627 APLP2Q06481 763 aa21.82■■□□□ 1.08
ELAVL1-201ENST00000407627 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
ELAVL1-201ENST00000407627 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
ELAVL1-201ENST00000407627 RANGAP1P46060 587 aaPredicted RBP21.37■■□□□ 1.01
ELAVL1-201ENST00000407627 TTBK1Q5TCY1 1321 aaPredicted RBP21.34■■□□□ 1.01
ELAVL1-201ENST00000407627 ATP1B4Q9UN42 357 aaPredicted RBP21.22■□□□□ 0.99
ELAVL1-201ENST00000407627 UBTFP17480 764 aaKnown RBP21.18■□□□□ 0.98
ELAVL1-201ENST00000407627 ABCC9O60706 1549 aa21.11■□□□□ 0.97
ELAVL1-201ENST00000407627 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
ELAVL1-201ENST00000407627 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
ELAVL1-201ENST00000407627 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
ELAVL1-201ENST00000407627 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
ELAVL1-201ENST00000407627 ZEB1P37275 1124 aaPredicted RBP20.71■□□□□ 0.91
ELAVL1-201ENST00000407627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
ELAVL1-201ENST00000407627 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
ELAVL1-201ENST00000407627 PPARGC1BQ86YN6 1023 aaKnown RBP20.56■□□□□ 0.88
ELAVL1-201ENST00000407627 MYT1LQ9UL68 1186 aa20.5■□□□□ 0.87
ELAVL1-201ENST00000407627 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
ELAVL1-201ENST00000407627 ITGAEP38570 1179 aa20.37■□□□□ 0.85
ELAVL1-201ENST00000407627 LOC105371045A0A1W2PR82 267 aa20.35■□□□□ 0.85
ELAVL1-201ENST00000407627 TRIM26Q12899 539 aaPredicted RBP20.35■□□□□ 0.85
ELAVL1-201ENST00000407627 CENPBP07199 599 aaPredicted RBP20.32■□□□□ 0.84
ELAVL1-201ENST00000407627 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
ELAVL1-201ENST00000407627 SCRIBQ14160 1630 aa20.19■□□□□ 0.82
ELAVL1-201ENST00000407627 ZCCHC6Q5VYS8 1495 aaKnown RBP20.14■□□□□ 0.81
ELAVL1-201ENST00000407627 FBLN2P98095 1184 aa20.08■□□□□ 0.81
ELAVL1-201ENST00000407627 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
ELAVL1-201ENST00000407627 NEFLP07196 543 aa20.01■□□□□ 0.79
ELAVL1-201ENST00000407627 YTHDC1Q96MU7 727 aaKnown RBP20.01■□□□□ 0.79
ELAVL1-201ENST00000407627 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
ELAVL1-201ENST00000407627 ERICH6Q7L0X2 663 aa19.9■□□□□ 0.78
ELAVL1-201ENST00000407627 RB1CC1Q8TDY2 1594 aa19.89■□□□□ 0.77
ELAVL1-201ENST00000407627 TRIM52Q96A61 297 aa19.85■□□□□ 0.77
ELAVL1-201ENST00000407627 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.76
ELAVL1-201ENST00000407627 HRCP23327 699 aa19.77■□□□□ 0.76
ELAVL1-201ENST00000407627 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
ELAVL1-201ENST00000407627 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
ELAVL1-201ENST00000407627 CNGB1Q14028 1251 aaPredicted RBP19.72■□□□□ 0.75
ELAVL1-201ENST00000407627 ARID3CA6NKF2 412 aa19.68■□□□□ 0.74
ELAVL1-201ENST00000407627 NACADO15069 1562 aa19.66■□□□□ 0.74
ELAVL1-201ENST00000407627 NEUROD1Q13562 356 aa19.62■□□□□ 0.73
ELAVL1-201ENST00000407627 CDK11AQ9UQ88 783 aaPredicted RBP19.59■□□□□ 0.73
ELAVL1-201ENST00000407627 ZNF777Q9ULD5 760 aaPredicted RBP19.53■□□□□ 0.72
ELAVL1-201ENST00000407627 ZNF326Q5BKZ1 582 aaKnown RBP19.52■□□□□ 0.71
ELAVL1-201ENST00000407627 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
ELAVL1-201ENST00000407627 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.7
ELAVL1-201ENST00000407627 BCANQ96GW7 911 aa19.39■□□□□ 0.69
ELAVL1-201ENST00000407627 BAZ1BQ9UIG0 1483 aaKnown RBP19.38■□□□□ 0.69
ELAVL1-201ENST00000407627 CHMP7Q8WUX9 453 aaPredicted RBP19.36■□□□□ 0.69
ELAVL1-201ENST00000407627 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
ELAVL1-201ENST00000407627 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
ELAVL1-201ENST00000407627 DAXXQ9UER7 740 aaPredicted RBP19.33■□□□□ 0.68
ELAVL1-201ENST00000407627 ANP32CO43423 234 aa19.25■□□□□ 0.67
ELAVL1-201ENST00000407627 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
ELAVL1-201ENST00000407627 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
ELAVL1-201ENST00000407627 STAG3Q9UJ98 1225 aa19.17■□□□□ 0.66
ELAVL1-201ENST00000407627 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
ELAVL1-201ENST00000407627 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
ELAVL1-201ENST00000407627 CHGAP10645 457 aaKnown RBP19.14■□□□□ 0.65
ELAVL1-201ENST00000407627 MTUS2Q5JR59 1369 aa19.13■□□□□ 0.65
ELAVL1-201ENST00000407627 CLSPNQ9HAW4 1339 aa19.12■□□□□ 0.65
ELAVL1-201ENST00000407627 EEA1Q15075 1411 aa19.12■□□□□ 0.65
ELAVL1-201ENST00000407627 ZNF316A6NFI3 1004 aaPredicted RBP19.11■□□□□ 0.65
ELAVL1-201ENST00000407627 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
ELAVL1-201ENST00000407627 CLIP1P30622 1438 aa19.1■□□□□ 0.65
ELAVL1-201ENST00000407627 CHIC2Q9UKJ5 165 aa19.09■□□□□ 0.65
ELAVL1-201ENST00000407627 NEFMP07197 916 aa19.08■□□□□ 0.64
ELAVL1-201ENST00000407627 TONSLQ96HA7 1378 aa19.07■□□□□ 0.64
ELAVL1-201ENST00000407627 TSPY4P0CV99 314 aa19.07■□□□□ 0.64
ELAVL1-201ENST00000407627 TSPY10P0CW01 314 aa19.07■□□□□ 0.64
ELAVL1-201ENST00000407627 GOLGA3Q08378 1498 aa19.07■□□□□ 0.64
ELAVL1-201ENST00000407627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.642e-7■□□□□ 9.3
ELAVL1-201ENST00000407627 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
ELAVL1-201ENST00000407627 SLC24A1O60721 1099 aa19.03■□□□□ 0.64
ELAVL1-201ENST00000407627 CECR2Q9BXF3 1484 aa19.02■□□□□ 0.64
ELAVL1-201ENST00000407627 PLEKHD1A6NEE1 506 aa18.97■□□□□ 0.63
ELAVL1-201ENST00000407627 KCNH8Q96L42 1107 aa18.97■□□□□ 0.63
ELAVL1-201ENST00000407627 ZBTB47Q9UFB7 747 aaPredicted RBP18.95■□□□□ 0.62
ELAVL1-201ENST00000407627 CANXP27824 592 aaKnown RBP18.94■□□□□ 0.62
ELAVL1-201ENST00000407627 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
ELAVL1-201ENST00000407627 CEP164Q9UPV0 1460 aa18.91■□□□□ 0.62
ELAVL1-201ENST00000407627 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
ELAVL1-201ENST00000407627 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
ELAVL1-201ENST00000407627 TNIKQ9UKE5 1360 aa18.81■□□□□ 0.6
ELAVL1-201ENST00000407627 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
ELAVL1-201ENST00000407627 KDM2AQ9Y2K7 1162 aa18.8■□□□□ 0.6
ELAVL1-201ENST00000407627 CUX2O14529 1486 aa18.78■□□□□ 0.6
ELAVL1-201ENST00000407627 CFDP1Q9UEE9 299 aaPredicted RBP18.78■□□□□ 0.6
ELAVL1-201ENST00000407627 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.59
ELAVL1-201ENST00000407627 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
ELAVL1-201ENST00000407627 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
ELAVL1-201ENST00000407627 CCDC88BA6NC98 1476 aa18.75■□□□□ 0.59
ELAVL1-201ENST00000407627 ACIN1Q9UKV3 1341 aaKnown RBP18.73■□□□□ 0.59
ELAVL1-201ENST00000407627 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
ELAVL1-201ENST00000407627 BCL11AQ9H165 835 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms