RNA–Protein interactions for RNA: ENST00000477854.5

PTPN5-205, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 5 BASIC

Gene PTPN5, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-205ENST00000477854 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
PTPN5-205ENST00000477854 CCDC180Q9P1Z9 1646 aa25.36■■□□□ 1.65
PTPN5-205ENST00000477854 ABCC9O60706 1549 aa25.05■■□□□ 1.6
PTPN5-205ENST00000477854 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
PTPN5-205ENST00000477854 NACADO15069 1562 aa23.94■■□□□ 1.42
PTPN5-205ENST00000477854 MYO15BQ96JP2 1530 aa23.73■■□□□ 1.39
PTPN5-205ENST00000477854 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
PTPN5-205ENST00000477854 DNAJC5BQ9UF47 199 aa23.47■■□□□ 1.35
PTPN5-205ENST00000477854 UNC13AQ9UPW8 1703 aa23.46■■□□□ 1.35
PTPN5-205ENST00000477854 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.33
PTPN5-205ENST00000477854 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
PTPN5-205ENST00000477854 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
PTPN5-205ENST00000477854 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
PTPN5-205ENST00000477854 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
PTPN5-205ENST00000477854 PABPN1Q86U42 306 aaKnown RBP eCLIP23.23■■□□□ 1.31
PTPN5-205ENST00000477854 SCRIBQ14160 1630 aa22.84■■□□□ 1.25
PTPN5-205ENST00000477854 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
PTPN5-205ENST00000477854 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
PTPN5-205ENST00000477854 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
PTPN5-205ENST00000477854 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
PTPN5-205ENST00000477854 HRCP23327 699 aa22.55■■□□□ 1.2
PTPN5-205ENST00000477854 PCGF6Q9BYE7 350 aa22.41■■□□□ 1.18
PTPN5-205ENST00000477854 LOC105371045A0A1W2PR82 267 aa22.17■■□□□ 1.14
PTPN5-205ENST00000477854 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
PTPN5-205ENST00000477854 PPARGC1BQ86YN6 1023 aaKnown RBP22.04■■□□□ 1.12
PTPN5-205ENST00000477854 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
PTPN5-205ENST00000477854 HMGXB3Q12766 1538 aa21.93■■□□□ 1.1
PTPN5-205ENST00000477854 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
PTPN5-205ENST00000477854 SMARCA4P51532 1647 aa21.92■■□□□ 1.1
PTPN5-205ENST00000477854 TRIM26Q12899 539 aaPredicted RBP21.91■■□□□ 1.1
PTPN5-205ENST00000477854 BAZ1AQ9NRL2 1556 aaPredicted RBP21.84■■□□□ 1.09
PTPN5-205ENST00000477854 CUX2O14529 1486 aa21.83■■□□□ 1.09
PTPN5-205ENST00000477854 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.09
PTPN5-205ENST00000477854 PEG3Q9GZU2 1588 aa21.83■■□□□ 1.08
PTPN5-205ENST00000477854 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
PTPN5-205ENST00000477854 DNAJC5Q9H3Z4 198 aa21.7■■□□□ 1.06
PTPN5-205ENST00000477854 BAZ1BQ9UIG0 1483 aaKnown RBP21.69■■□□□ 1.06
PTPN5-205ENST00000477854 ERCC6Q03468 1493 aa21.68■■□□□ 1.06
PTPN5-205ENST00000477854 FAM9AQ8IZU1 332 aaPredicted RBP21.61■■□□□ 1.05
PTPN5-205ENST00000477854 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
PTPN5-205ENST00000477854 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
PTPN5-205ENST00000477854 MROH2BQ7Z745 1585 aa21.56■■□□□ 1.04
PTPN5-205ENST00000477854 NESP48681 1621 aa21.51■■□□□ 1.03
PTPN5-205ENST00000477854 THOC2Q8NI27 1593 aaKnown RBP21.46■■□□□ 1.03
PTPN5-205ENST00000477854 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
PTPN5-205ENST00000477854 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
PTPN5-205ENST00000477854 KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1.01
PTPN5-205ENST00000477854 CADPSQ9ULU8 1353 aa21.33■■□□□ 1.01
PTPN5-205ENST00000477854 WIZO95785 1651 aa21.29■■□□□ 1
PTPN5-205ENST00000477854 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
PTPN5-205ENST00000477854 WDR62O43379 1518 aa21.2■□□□□ 0.98
PTPN5-205ENST00000477854 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
PTPN5-205ENST00000477854 CFTRP13569 1480 aa21.12■□□□□ 0.97
PTPN5-205ENST00000477854 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
PTPN5-205ENST00000477854 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
PTPN5-205ENST00000477854 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
PTPN5-205ENST00000477854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
PTPN5-205ENST00000477854 CCER1Q8TC90 406 aaPredicted RBP20.99■□□□□ 0.95
PTPN5-205ENST00000477854 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
PTPN5-205ENST00000477854 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
PTPN5-205ENST00000477854 URB2Q14146 1524 aaKnown RBP20.87■□□□□ 0.93
PTPN5-205ENST00000477854 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
PTPN5-205ENST00000477854 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
PTPN5-205ENST00000477854 TTBK1Q5TCY1 1321 aaPredicted RBP20.82■□□□□ 0.92
PTPN5-205ENST00000477854 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.92
PTPN5-205ENST00000477854 CEP162Q5TB80 1403 aa20.8■□□□□ 0.92
PTPN5-205ENST00000477854 SOGA1O94964 1423 aa20.76■□□□□ 0.91
PTPN5-205ENST00000477854 TNIKQ9UKE5 1360 aa20.75■□□□□ 0.91
PTPN5-205ENST00000477854 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
PTPN5-205ENST00000477854 CSRNP3Q8WYN3 585 aa20.72■□□□□ 0.91
PTPN5-205ENST00000477854 UBTFP17480 764 aaKnown RBP20.72■□□□□ 0.91
PTPN5-205ENST00000477854 EEA1Q15075 1411 aa20.7■□□□□ 0.9
PTPN5-205ENST00000477854 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
PTPN5-205ENST00000477854 OSCARQ8IYS5 282 aa20.69■□□□□ 0.9
PTPN5-205ENST00000477854 ACIN1Q9UKV3 1341 aaKnown RBP20.67■□□□□ 0.9
PTPN5-205ENST00000477854 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
PTPN5-205ENST00000477854 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
PTPN5-205ENST00000477854 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
PTPN5-205ENST00000477854 NEUROD1Q13562 356 aa20.61■□□□□ 0.89
PTPN5-205ENST00000477854 GOLGA3Q08378 1498 aa20.58■□□□□ 0.88
PTPN5-205ENST00000477854 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
PTPN5-205ENST00000477854 ZNF608Q9ULD9 1512 aaPredicted RBP20.55■□□□□ 0.88
PTPN5-205ENST00000477854 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
PTPN5-205ENST00000477854 EIF4G3O43432 1585 aaKnown RBP20.52■□□□□ 0.88
PTPN5-205ENST00000477854 WDR97A6NE52 1622 aa20.5■□□□□ 0.87
PTPN5-205ENST00000477854 MYT1Q01538 1121 aa20.48■□□□□ 0.87
PTPN5-205ENST00000477854 ZNF316A6NFI3 1004 aaPredicted RBP20.47■□□□□ 0.87
PTPN5-205ENST00000477854 GTF3C3Q9Y5Q9 886 aa20.46■□□□□ 0.87
PTPN5-205ENST00000477854 RIMBP3CA6NJZ7 1639 aa20.44■□□□□ 0.86
PTPN5-205ENST00000477854 RIMBP3BA6NNM3 1639 aa20.44■□□□□ 0.86
PTPN5-205ENST00000477854 RIMBP3Q9UFD9 1639 aa20.44■□□□□ 0.86
PTPN5-205ENST00000477854 POLA1P09884 1462 aaPredicted RBP20.44■□□□□ 0.86
PTPN5-205ENST00000477854 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
PTPN5-205ENST00000477854 CLIP1P30622 1438 aa20.37■□□□□ 0.85
PTPN5-205ENST00000477854 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
PTPN5-205ENST00000477854 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
PTPN5-205ENST00000477854 CHD1O14646 1710 aa20.36■□□□□ 0.85
PTPN5-205ENST00000477854 AQRO60306 1485 aaKnown RBP eCLIP20.35■□□□□ 0.85
PTPN5-205ENST00000477854 APLP2Q06481 763 aa20.35■□□□□ 0.85
PTPN5-205ENST00000477854 KIF21BO75037 1637 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms