RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
AP001062.3-202ENST00000444409 CCDC180Q9P1Z9 1646 aa30.12■■■□□ 2.41
AP001062.3-202ENST00000444409 ABCC9O60706 1549 aa29.71■■■□□ 2.35
AP001062.3-202ENST00000444409 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
AP001062.3-202ENST00000444409 NACADO15069 1562 aa28.38■■■□□ 2.13
AP001062.3-202ENST00000444409 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
AP001062.3-202ENST00000444409 MYO15BQ96JP2 1530 aa28.16■■■□□ 2.1
AP001062.3-202ENST00000444409 ZCCHC6Q5VYS8 1495 aaKnown RBP28.06■■■□□ 2.08
AP001062.3-202ENST00000444409 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
AP001062.3-202ENST00000444409 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
AP001062.3-202ENST00000444409 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
AP001062.3-202ENST00000444409 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
AP001062.3-202ENST00000444409 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
AP001062.3-202ENST00000444409 SCRIBQ14160 1630 aa27.44■■□□□ 1.98
AP001062.3-202ENST00000444409 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
AP001062.3-202ENST00000444409 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
AP001062.3-202ENST00000444409 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
AP001062.3-202ENST00000444409 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
AP001062.3-202ENST00000444409 SMARCA4P51532 1647 aa26.24■■□□□ 1.79
AP001062.3-202ENST00000444409 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
AP001062.3-202ENST00000444409 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
AP001062.3-202ENST00000444409 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
AP001062.3-202ENST00000444409 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
AP001062.3-202ENST00000444409 HMGXB3Q12766 1538 aa26.05■■□□□ 1.76
AP001062.3-202ENST00000444409 PEG3Q9GZU2 1588 aa26.01■■□□□ 1.75
AP001062.3-202ENST00000444409 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
AP001062.3-202ENST00000444409 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
AP001062.3-202ENST00000444409 WIZO95785 1651 aa25.68■■□□□ 1.7
AP001062.3-202ENST00000444409 NESP48681 1621 aa25.64■■□□□ 1.7
AP001062.3-202ENST00000444409 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
AP001062.3-202ENST00000444409 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
AP001062.3-202ENST00000444409 LAMC3Q9Y6N6 1575 aa25.55■■□□□ 1.68
AP001062.3-202ENST00000444409 CUX2O14529 1486 aa25.48■■□□□ 1.67
AP001062.3-202ENST00000444409 CADPSQ9ULU8 1353 aa25.42■■□□□ 1.66
AP001062.3-202ENST00000444409 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
AP001062.3-202ENST00000444409 PDS5BQ9NTI5 1447 aa25.38■■□□□ 1.65
AP001062.3-202ENST00000444409 THOC2Q8NI27 1593 aaKnown RBP25.32■■□□□ 1.64
AP001062.3-202ENST00000444409 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
AP001062.3-202ENST00000444409 CFTRP13569 1480 aa25.22■■□□□ 1.63
AP001062.3-202ENST00000444409 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.61
AP001062.3-202ENST00000444409 FANCD2Q9BXW9 1451 aa25.12■■□□□ 1.61
AP001062.3-202ENST00000444409 CCDC88BA6NC98 1476 aa25.11■■□□□ 1.61
AP001062.3-202ENST00000444409 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
AP001062.3-202ENST00000444409 WDR62O43379 1518 aa25.08■■□□□ 1.61
AP001062.3-202ENST00000444409 DNAJC5Q9H3Z4 198 aa25.01■■□□□ 1.59
AP001062.3-202ENST00000444409 PRDM2Q13029 1718 aa24.97■■□□□ 1.59
AP001062.3-202ENST00000444409 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
AP001062.3-202ENST00000444409 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
AP001062.3-202ENST00000444409 TOPBP1Q92547 1522 aa24.69■■□□□ 1.54
AP001062.3-202ENST00000444409 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
AP001062.3-202ENST00000444409 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
AP001062.3-202ENST00000444409 IFT140Q96RY7 1462 aa24.6■■□□□ 1.53
AP001062.3-202ENST00000444409 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
AP001062.3-202ENST00000444409 POLA1P09884 1462 aaPredicted RBP24.47■■□□□ 1.51
AP001062.3-202ENST00000444409 TARBP1Q13395 1621 aaKnown RBP24.45■■□□□ 1.5
AP001062.3-202ENST00000444409 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
AP001062.3-202ENST00000444409 CUX1P39880 1505 aa24.4■■□□□ 1.5
AP001062.3-202ENST00000444409 OSCARQ8IYS5 282 aa24.36■■□□□ 1.49
AP001062.3-202ENST00000444409 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
AP001062.3-202ENST00000444409 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
AP001062.3-202ENST00000444409 SOGA1O94964 1423 aa24.35■■□□□ 1.49
AP001062.3-202ENST00000444409 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.49
AP001062.3-202ENST00000444409 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
AP001062.3-202ENST00000444409 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
AP001062.3-202ENST00000444409 WRNQ14191 1432 aaPredicted RBP eCLIP24.14■■□□□ 1.45
AP001062.3-202ENST00000444409 CHD1O14646 1710 aa24.13■■□□□ 1.45
AP001062.3-202ENST00000444409 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
AP001062.3-202ENST00000444409 TOP2BQ02880 1626 aa24.12■■□□□ 1.45
AP001062.3-202ENST00000444409 BIVM-ERCC5R4GMW8 1640 aa24.12■■□□□ 1.45
AP001062.3-202ENST00000444409 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
AP001062.3-202ENST00000444409 GRIN2BQ13224 1484 aa24.1■■□□□ 1.45
AP001062.3-202ENST00000444409 SYNJ1O43426 1573 aa24.1■■□□□ 1.45
AP001062.3-202ENST00000444409 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
AP001062.3-202ENST00000444409 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
AP001062.3-202ENST00000444409 FBLN2P98095 1184 aa24.06■■□□□ 1.44
AP001062.3-202ENST00000444409 ABCA5Q8WWZ7 1642 aa24.05■■□□□ 1.44
AP001062.3-202ENST00000444409 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
AP001062.3-202ENST00000444409 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
AP001062.3-202ENST00000444409 RIMBP3CA6NJZ7 1639 aa24■■□□□ 1.43
AP001062.3-202ENST00000444409 RIMBP3BA6NNM3 1639 aa24■■□□□ 1.43
AP001062.3-202ENST00000444409 RIMBP3Q9UFD9 1639 aa24■■□□□ 1.43
AP001062.3-202ENST00000444409 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
AP001062.3-202ENST00000444409 ARHGEF11O15085 1522 aa23.98■■□□□ 1.43
AP001062.3-202ENST00000444409 CHMP7Q8WUX9 453 aaPredicted RBP23.97■■□□□ 1.43
AP001062.3-202ENST00000444409 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
AP001062.3-202ENST00000444409 ADAMTS12P58397 1594 aa23.84■■□□□ 1.41
AP001062.3-202ENST00000444409 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
AP001062.3-202ENST00000444409 GRIN2AQ12879 1464 aa23.8■■□□□ 1.4
AP001062.3-202ENST00000444409 FHAD1B1AJZ9 1412 aa23.78■■□□□ 1.4
AP001062.3-202ENST00000444409 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
AP001062.3-202ENST00000444409 CYB5RLQ6IPT4 315 aa23.74■■□□□ 1.39
AP001062.3-202ENST00000444409 NUP160Q12769 1436 aa23.72■■□□□ 1.39
AP001062.3-202ENST00000444409 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
AP001062.3-202ENST00000444409 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
AP001062.3-202ENST00000444409 IGF1RP08069 1367 aa23.61■■□□□ 1.37
AP001062.3-202ENST00000444409 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
AP001062.3-202ENST00000444409 CUL7Q14999 1698 aa23.54■■□□□ 1.36
AP001062.3-202ENST00000444409 ERCC6L2Q5T890 1561 aa23.53■■□□□ 1.36
AP001062.3-202ENST00000444409 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
AP001062.3-202ENST00000444409 CARMIL1Q5VZK9 1371 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms