Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HIST2H2BC-201ENST00000498492 580 ntBASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 ALG1L13P-202ENST00000519320 584 ntBASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 NDUFV2P1-201ENST00000596415 907 ntBASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AMBRA1Q9C0C7 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 FNTAP2-201ENST00000430308 634 ntBASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 KRT8P1-201ENST00000557533 1207 ntBASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 AL805961.1-203ENST00000641078 1258 ntBASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AMBRA1Q9C0C7 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 GUCY2EP-203ENST00000531117 1918 ntBASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 AC008132.1-202ENST00000342005 1389 ntBASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 DUX4L50-201ENST00000455245 715 ntBASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 UPF3AP2-201ENST00000457924 1132 ntBASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AMBRA1Q9C0C7 RCC2P8-201ENST00000502779 1035 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms