RNA–Protein interactions for RNA: ENST00000611216.4

KDM2B-219, Transcript of lysine demethylase 2B, humanhuman

TSL 5 BASIC

Gene KDM2B, Length 3,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-219ENST00000611216 NISCHQ9Y2I1 1504 aa26■■□□□ 1.75
KDM2B-219ENST00000611216 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
KDM2B-219ENST00000611216 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
KDM2B-219ENST00000611216 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
KDM2B-219ENST00000611216 ZCCHC6Q5VYS8 1495 aaKnown RBP21.94■■□□□ 1.1
KDM2B-219ENST00000611216 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.08
KDM2B-219ENST00000611216 MYO15BQ96JP2 1530 aa21.77■■□□□ 1.08
KDM2B-219ENST00000611216 CCDC180Q9P1Z9 1646 aa21.63■■□□□ 1.05
KDM2B-219ENST00000611216 PCGF6Q9BYE7 350 aa21.62■■□□□ 1.05
KDM2B-219ENST00000611216 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
KDM2B-219ENST00000611216 PPARGC1BQ86YN6 1023 aaKnown RBP21.38■■□□□ 1.01
KDM2B-219ENST00000611216 HRCP23327 699 aa21.36■■□□□ 1.01
KDM2B-219ENST00000611216 EHMT2Q96KQ7 1210 aa21.35■■□□□ 1.01
KDM2B-219ENST00000611216 FAM9AQ8IZU1 332 aaPredicted RBP21.2■□□□□ 0.98
KDM2B-219ENST00000611216 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
KDM2B-219ENST00000611216 TRIM41Q8WV44 630 aa20.94■□□□□ 0.94
KDM2B-219ENST00000611216 DCAF1Q9Y4B6 1507 aa20.92■□□□□ 0.94
KDM2B-219ENST00000611216 RSF1Q96T23 1441 aaPredicted RBP20.8■□□□□ 0.92
KDM2B-219ENST00000611216 TRIM26Q12899 539 aaPredicted RBP20.79■□□□□ 0.92
KDM2B-219ENST00000611216 ABCC9O60706 1549 aa20.79■□□□□ 0.92
KDM2B-219ENST00000611216 RB1CC1Q8TDY2 1594 aa20.65■□□□□ 0.9
KDM2B-219ENST00000611216 TTBK1Q5TCY1 1321 aaPredicted RBP20.62■□□□□ 0.89
KDM2B-219ENST00000611216 CECR2Q9BXF3 1484 aa20.6■□□□□ 0.89
KDM2B-219ENST00000611216 MROH2BQ7Z745 1585 aa20.41■□□□□ 0.86
KDM2B-219ENST00000611216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.84
KDM2B-219ENST00000611216 WIZO95785 1651 aa20.3■□□□□ 0.84
KDM2B-219ENST00000611216 ZEB1P37275 1124 aaPredicted RBP20.2■□□□□ 0.82
KDM2B-219ENST00000611216 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
KDM2B-219ENST00000611216 CCER1Q8TC90 406 aaPredicted RBP20.17■□□□□ 0.82
KDM2B-219ENST00000611216 NACADO15069 1562 aa20.15■□□□□ 0.82
KDM2B-219ENST00000611216 ABCC8Q09428 1581 aa20.08■□□□□ 0.8
KDM2B-219ENST00000611216 RANGAP1P46060 587 aaPredicted RBP20.08■□□□□ 0.8
KDM2B-219ENST00000611216 UBTFP17480 764 aaKnown RBP20.06■□□□□ 0.8
KDM2B-219ENST00000611216 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
KDM2B-219ENST00000611216 SOGA1O94964 1423 aa19.96■□□□□ 0.79
KDM2B-219ENST00000611216 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
KDM2B-219ENST00000611216 BAZ1AQ9NRL2 1556 aaPredicted RBP19.9■□□□□ 0.78
KDM2B-219ENST00000611216 RUSC2Q8N2Y8 1516 aa19.88■□□□□ 0.77
KDM2B-219ENST00000611216 CSRNP3Q8WYN3 585 aa19.82■□□□□ 0.76
KDM2B-219ENST00000611216 HNRNPUL2Q1KMD3 747 aaKnown RBP19.82■□□□□ 0.76
KDM2B-219ENST00000611216 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
KDM2B-219ENST00000611216 DIEXFQ68CQ4 756 aaKnown RBP19.75■□□□□ 0.75
KDM2B-219ENST00000611216 TOP2AP11388 1531 aaKnown RBP19.74■□□□□ 0.75
KDM2B-219ENST00000611216 SMARCA4P51532 1647 aa19.74■□□□□ 0.75
KDM2B-219ENST00000611216 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
KDM2B-219ENST00000611216 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
KDM2B-219ENST00000611216 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
KDM2B-219ENST00000611216 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
KDM2B-219ENST00000611216 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
KDM2B-219ENST00000611216 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
KDM2B-219ENST00000611216 ACIN1Q9UKV3 1341 aaKnown RBP19.58■□□□□ 0.72
KDM2B-219ENST00000611216 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
KDM2B-219ENST00000611216 GTF3C3Q9Y5Q9 886 aa19.56■□□□□ 0.72
KDM2B-219ENST00000611216 APLP2Q06481 763 aa19.53■□□□□ 0.72
KDM2B-219ENST00000611216 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
KDM2B-219ENST00000611216 ZNF316A6NFI3 1004 aaPredicted RBP19.44■□□□□ 0.7
KDM2B-219ENST00000611216 CLIP1P30622 1438 aa19.43■□□□□ 0.7
KDM2B-219ENST00000611216 CENPBP07199 599 aaPredicted RBP19.41■□□□□ 0.7
KDM2B-219ENST00000611216 BICRAQ9NZM4 1560 aa19.41■□□□□ 0.7
KDM2B-219ENST00000611216 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
KDM2B-219ENST00000611216 ITGAEP38570 1179 aa19.38■□□□□ 0.69
KDM2B-219ENST00000611216 RAPGEF2Q9Y4G8 1499 aa19.38■□□□□ 0.69
KDM2B-219ENST00000611216 MIER1Q8N108 512 aa19.38■□□□□ 0.69
KDM2B-219ENST00000611216 EEA1Q15075 1411 aa19.37■□□□□ 0.69
KDM2B-219ENST00000611216 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
KDM2B-219ENST00000611216 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
KDM2B-219ENST00000611216 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
KDM2B-219ENST00000611216 KANK4Q5T7N3 995 aaPredicted RBP19.27■□□□□ 0.68
KDM2B-219ENST00000611216 VPS8Q8N3P4 1428 aa19.22■□□□□ 0.67
KDM2B-219ENST00000611216 PELP1Q8IZL8 1130 aaKnown RBP19.19■□□□□ 0.66
KDM2B-219ENST00000611216 ATP1B4Q9UN42 357 aaPredicted RBP19.16■□□□□ 0.66
KDM2B-219ENST00000611216 KIF21BO75037 1637 aa19.12■□□□□ 0.65
KDM2B-219ENST00000611216 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
KDM2B-219ENST00000611216 PEG3Q9GZU2 1588 aa19.07■□□□□ 0.64
KDM2B-219ENST00000611216 ARAP1Q96P48 1450 aa19■□□□□ 0.63
KDM2B-219ENST00000611216 DHX57Q6P158 1386 aaKnown RBP18.98■□□□□ 0.63
KDM2B-219ENST00000611216 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
KDM2B-219ENST00000611216 FAM50AQ14320 339 aaKnown RBP18.95■□□□□ 0.62
KDM2B-219ENST00000611216 CUX1P39880 1505 aa18.93■□□□□ 0.62
KDM2B-219ENST00000611216 HIRIP3Q9BW71 556 aaPredicted RBP18.92■□□□□ 0.62
KDM2B-219ENST00000611216 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
KDM2B-219ENST00000611216 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
KDM2B-219ENST00000611216 KCNH8Q96L42 1107 aa18.91■□□□□ 0.62
KDM2B-219ENST00000611216 SIN3AQ96ST3 1273 aa18.86■□□□□ 0.61
KDM2B-219ENST00000611216 CUX2O14529 1486 aa18.85■□□□□ 0.61
KDM2B-219ENST00000611216 CCNB3Q8WWL7 1395 aa18.83■□□□□ 0.61
KDM2B-219ENST00000611216 ARHGAP35Q9NRY4 1499 aa18.81■□□□□ 0.6
KDM2B-219ENST00000611216 NCAPD3P42695 1498 aa18.77■□□□□ 0.6
KDM2B-219ENST00000611216 BIVM-ERCC5R4GMW8 1640 aa18.77■□□□□ 0.6
KDM2B-219ENST00000611216 IGF1RP08069 1367 aa18.76■□□□□ 0.59
KDM2B-219ENST00000611216 RAB3GAP2Q9H2M9 1393 aa18.76■□□□□ 0.59
KDM2B-219ENST00000611216 DDX10Q13206 875 aaKnown RBP18.76■□□□□ 0.59
KDM2B-219ENST00000611216 BCANQ96GW7 911 aa18.76■□□□□ 0.59
KDM2B-219ENST00000611216 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
KDM2B-219ENST00000611216 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
KDM2B-219ENST00000611216 CFTRP13569 1480 aa18.72■□□□□ 0.59
KDM2B-219ENST00000611216 RRBP1Q9P2E9 1410 aaKnown RBP18.7■□□□□ 0.58
KDM2B-219ENST00000611216 PHLDB1Q86UU1 1377 aa18.69■□□□□ 0.58
KDM2B-219ENST00000611216 ARID3CA6NKF2 412 aa18.67■□□□□ 0.58
KDM2B-219ENST00000611216 SUPT16HQ9Y5B9 1047 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms