RNA–Protein interactions for RNA: ENST00000610189.1

GPN1-211, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPN1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-211ENST00000610189 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
GPN1-211ENST00000610189 CCDC180Q9P1Z9 1646 aa27.31■■□□□ 1.96
GPN1-211ENST00000610189 ZCCHC6Q5VYS8 1495 aaKnown RBP26.22■■□□□ 1.79
GPN1-211ENST00000610189 DCAF1Q9Y4B6 1507 aa25.8■■□□□ 1.72
GPN1-211ENST00000610189 ABCC9O60706 1549 aa25.76■■□□□ 1.71
GPN1-211ENST00000610189 DCAF8L2P0C7V8 631 aa25.65■■□□□ 1.7
GPN1-211ENST00000610189 MYO15BQ96JP2 1530 aa25.49■■□□□ 1.67
GPN1-211ENST00000610189 SHROOM4Q9ULL8 1493 aa25.39■■□□□ 1.65
GPN1-211ENST00000610189 NACADO15069 1562 aa25.37■■□□□ 1.65
GPN1-211ENST00000610189 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
GPN1-211ENST00000610189 SCRIBQ14160 1630 aa25.08■■□□□ 1.61
GPN1-211ENST00000610189 UNC13AQ9UPW8 1703 aa24.78■■□□□ 1.56
GPN1-211ENST00000610189 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
GPN1-211ENST00000610189 SUPT5HO00267 1087 aaKnown RBP24.36■■□□□ 1.49
GPN1-211ENST00000610189 CECR2Q9BXF3 1484 aa24.22■■□□□ 1.47
GPN1-211ENST00000610189 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.47
GPN1-211ENST00000610189 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
GPN1-211ENST00000610189 MROH2BQ7Z745 1585 aa24.1■■□□□ 1.45
GPN1-211ENST00000610189 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
GPN1-211ENST00000610189 SMARCA4P51532 1647 aa24.04■■□□□ 1.44
GPN1-211ENST00000610189 WIZO95785 1651 aa23.95■■□□□ 1.42
GPN1-211ENST00000610189 PEG3Q9GZU2 1588 aa23.72■■□□□ 1.39
GPN1-211ENST00000610189 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
GPN1-211ENST00000610189 EIF4G1Q04637 1599 aaKnown RBP23.68■■□□□ 1.38
GPN1-211ENST00000610189 SMARCA2P51531 1590 aa23.6■■□□□ 1.37
GPN1-211ENST00000610189 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
GPN1-211ENST00000610189 BAZ1BQ9UIG0 1483 aaKnown RBP23.47■■□□□ 1.35
GPN1-211ENST00000610189 HMGXB3Q12766 1538 aa23.4■■□□□ 1.34
GPN1-211ENST00000610189 CCDC88BA6NC98 1476 aa23.39■■□□□ 1.33
GPN1-211ENST00000610189 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
GPN1-211ENST00000610189 CC2D2AQ9P2K1 1620 aa23.36■■□□□ 1.33
GPN1-211ENST00000610189 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
GPN1-211ENST00000610189 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
GPN1-211ENST00000610189 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
GPN1-211ENST00000610189 TRIM41Q8WV44 630 aa22.89■■□□□ 1.26
GPN1-211ENST00000610189 CFTRP13569 1480 aa22.85■■□□□ 1.25
GPN1-211ENST00000610189 CADPSQ9ULU8 1353 aa22.75■■□□□ 1.23
GPN1-211ENST00000610189 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
GPN1-211ENST00000610189 SYNJ1O43426 1573 aa22.72■■□□□ 1.23
GPN1-211ENST00000610189 DNAJC5BQ9UF47 199 aa22.66■■□□□ 1.22
GPN1-211ENST00000610189 LAMC3Q9Y6N6 1575 aa22.64■■□□□ 1.21
GPN1-211ENST00000610189 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
GPN1-211ENST00000610189 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
GPN1-211ENST00000610189 NESP48681 1621 aa22.61■■□□□ 1.21
GPN1-211ENST00000610189 CUX1P39880 1505 aa22.56■■□□□ 1.2
GPN1-211ENST00000610189 FANCD2Q9BXW9 1451 aa22.55■■□□□ 1.2
GPN1-211ENST00000610189 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
GPN1-211ENST00000610189 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
GPN1-211ENST00000610189 SOGA1O94964 1423 aa22.44■■□□□ 1.18
GPN1-211ENST00000610189 CEP164Q9UPV0 1460 aa22.42■■□□□ 1.18
GPN1-211ENST00000610189 EEA1Q15075 1411 aa22.4■■□□□ 1.18
GPN1-211ENST00000610189 PDS5BQ9NTI5 1447 aa22.4■■□□□ 1.18
GPN1-211ENST00000610189 LOC105371045A0A1W2PR82 267 aa22.4■■□□□ 1.18
GPN1-211ENST00000610189 DNMBPQ6XZF7 1577 aa22.38■■□□□ 1.17
GPN1-211ENST00000610189 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
GPN1-211ENST00000610189 TOPBP1Q92547 1522 aa22.32■■□□□ 1.16
GPN1-211ENST00000610189 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
GPN1-211ENST00000610189 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
GPN1-211ENST00000610189 CSRNP3Q8WYN3 585 aa22.21■■□□□ 1.15
GPN1-211ENST00000610189 POLA1P09884 1462 aaPredicted RBP22.19■■□□□ 1.14
GPN1-211ENST00000610189 KIF21BO75037 1637 aa22.18■■□□□ 1.14
GPN1-211ENST00000610189 EHMT2Q96KQ7 1210 aa22.17■■□□□ 1.14
GPN1-211ENST00000610189 MRC2Q9UBG0 1479 aa22.16■■□□□ 1.14
GPN1-211ENST00000610189 KIF27Q86VH2 1401 aa22.16■■□□□ 1.14
GPN1-211ENST00000610189 CUX2O14529 1486 aa22.14■■□□□ 1.13
GPN1-211ENST00000610189 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
GPN1-211ENST00000610189 GOLGA3Q08378 1498 aa22.11■■□□□ 1.13
GPN1-211ENST00000610189 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
GPN1-211ENST00000610189 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
GPN1-211ENST00000610189 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
GPN1-211ENST00000610189 WDR62O43379 1518 aa22.07■■□□□ 1.12
GPN1-211ENST00000610189 THOC2Q8NI27 1593 aaKnown RBP22.05■■□□□ 1.12
GPN1-211ENST00000610189 PRXQ9BXM0 1461 aa22.02■■□□□ 1.12
GPN1-211ENST00000610189 ERICH3Q5RHP9 1530 aa22.02■■□□□ 1.11
GPN1-211ENST00000610189 TARBP1Q13395 1621 aaKnown RBP22.01■■□□□ 1.11
GPN1-211ENST00000610189 RAPGEF2Q9Y4G8 1499 aa22.01■■□□□ 1.11
GPN1-211ENST00000610189 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
GPN1-211ENST00000610189 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
GPN1-211ENST00000610189 IGF1RP08069 1367 aa21.93■■□□□ 1.1
GPN1-211ENST00000610189 UBTFP17480 764 aaKnown RBP21.93■■□□□ 1.1
GPN1-211ENST00000610189 CEP162Q5TB80 1403 aa21.9■■□□□ 1.1
GPN1-211ENST00000610189 CUL7Q14999 1698 aa21.9■■□□□ 1.1
GPN1-211ENST00000610189 IFT140Q96RY7 1462 aa21.87■■□□□ 1.09
GPN1-211ENST00000610189 PBRM1Q86U86 1689 aa21.87■■□□□ 1.09
GPN1-211ENST00000610189 GAPVD1Q14C86 1478 aa21.86■■□□□ 1.09
GPN1-211ENST00000610189 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
GPN1-211ENST00000610189 CARMIL1Q5VZK9 1371 aa21.84■■□□□ 1.09
GPN1-211ENST00000610189 ZNF608Q9ULD9 1512 aaPredicted RBP21.76■■□□□ 1.07
GPN1-211ENST00000610189 EIF4G3O43432 1585 aaKnown RBP21.75■■□□□ 1.07
GPN1-211ENST00000610189 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.07
GPN1-211ENST00000610189 CLIP1P30622 1438 aa21.73■■□□□ 1.07
GPN1-211ENST00000610189 CTTNBP2Q8WZ74 1663 aa21.7■■□□□ 1.06
GPN1-211ENST00000610189 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
GPN1-211ENST00000610189 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
GPN1-211ENST00000610189 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
GPN1-211ENST00000610189 RANGAP1P46060 587 aaPredicted RBP21.59■■□□□ 1.05
GPN1-211ENST00000610189 SNAPC4Q5SXM2 1469 aa21.58■■□□□ 1.05
GPN1-211ENST00000610189 ARAP1Q96P48 1450 aa21.56■■□□□ 1.04
GPN1-211ENST00000610189 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
GPN1-211ENST00000610189 VPS8Q8N3P4 1428 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms