RNA–Protein interactions for RNA: ENST00000323940.9

STRA6-201, Transcript of stimulated by retinoic acid 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene STRA6, Length 2,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-201ENST00000323940 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
STRA6-201ENST00000323940 SHROOM4Q9ULL8 1493 aa23.21■■□□□ 1.31
STRA6-201ENST00000323940 CCDC180Q9P1Z9 1646 aa23.1■■□□□ 1.29
STRA6-201ENST00000323940 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
STRA6-201ENST00000323940 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
STRA6-201ENST00000323940 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
STRA6-201ENST00000323940 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
STRA6-201ENST00000323940 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
STRA6-201ENST00000323940 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
STRA6-201ENST00000323940 SCRIBQ14160 1630 aa21.7■■□□□ 1.06
STRA6-201ENST00000323940 ABCC9O60706 1549 aa21.7■■□□□ 1.06
STRA6-201ENST00000323940 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
STRA6-201ENST00000323940 LOC105371045A0A1W2PR82 267 aa21.41■■□□□ 1.02
STRA6-201ENST00000323940 PCGF6Q9BYE7 350 aa21.37■■□□□ 1.01
STRA6-201ENST00000323940 NACADO15069 1562 aa21.36■■□□□ 1.01
STRA6-201ENST00000323940 HRCP23327 699 aa21.32■■□□□ 1
STRA6-201ENST00000323940 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
STRA6-201ENST00000323940 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
STRA6-201ENST00000323940 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
STRA6-201ENST00000323940 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
STRA6-201ENST00000323940 WIZO95785 1651 aa21.03■□□□□ 0.96
STRA6-201ENST00000323940 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
STRA6-201ENST00000323940 TRIM26Q12899 539 aaPredicted RBP20.94■□□□□ 0.94
STRA6-201ENST00000323940 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
STRA6-201ENST00000323940 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.93
STRA6-201ENST00000323940 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
STRA6-201ENST00000323940 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
STRA6-201ENST00000323940 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
STRA6-201ENST00000323940 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
STRA6-201ENST00000323940 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
STRA6-201ENST00000323940 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
STRA6-201ENST00000323940 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
STRA6-201ENST00000323940 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
STRA6-201ENST00000323940 PABPN1Q86U42 306 aaKnown RBP eCLIP20.52■□□□□ 0.88
STRA6-201ENST00000323940 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
STRA6-201ENST00000323940 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
STRA6-201ENST00000323940 SOGA1O94964 1423 aa20.36■□□□□ 0.85
STRA6-201ENST00000323940 PEG3Q9GZU2 1588 aa20.28■□□□□ 0.84
STRA6-201ENST00000323940 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
STRA6-201ENST00000323940 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
STRA6-201ENST00000323940 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
STRA6-201ENST00000323940 EEA1Q15075 1411 aa20.21■□□□□ 0.83
STRA6-201ENST00000323940 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
STRA6-201ENST00000323940 TTBK1Q5TCY1 1321 aaPredicted RBP20.19■□□□□ 0.82
STRA6-201ENST00000323940 TNIKQ9UKE5 1360 aa20.19■□□□□ 0.82
STRA6-201ENST00000323940 ATAD2BQ9ULI0 1458 aa20.17■□□□□ 0.82
STRA6-201ENST00000323940 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
STRA6-201ENST00000323940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
STRA6-201ENST00000323940 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
STRA6-201ENST00000323940 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
STRA6-201ENST00000323940 GOLGA3Q08378 1498 aa20.1■□□□□ 0.81
STRA6-201ENST00000323940 CCER1Q8TC90 406 aaPredicted RBP20.09■□□□□ 0.81
STRA6-201ENST00000323940 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
STRA6-201ENST00000323940 KIF21BO75037 1637 aa19.96■□□□□ 0.79
STRA6-201ENST00000323940 CLIP1P30622 1438 aa19.88■□□□□ 0.77
STRA6-201ENST00000323940 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
STRA6-201ENST00000323940 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
STRA6-201ENST00000323940 RANGAP1P46060 587 aaPredicted RBP19.81■□□□□ 0.76
STRA6-201ENST00000323940 VPS8Q8N3P4 1428 aa19.78■□□□□ 0.76
STRA6-201ENST00000323940 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
STRA6-201ENST00000323940 HMGXB3Q12766 1538 aa19.77■□□□□ 0.76
STRA6-201ENST00000323940 NCAPD3P42695 1498 aa19.76■□□□□ 0.75
STRA6-201ENST00000323940 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
STRA6-201ENST00000323940 APLP2Q06481 763 aa19.7■□□□□ 0.74
STRA6-201ENST00000323940 CUX1P39880 1505 aa19.67■□□□□ 0.74
STRA6-201ENST00000323940 DIEXFQ68CQ4 756 aaKnown RBP19.66■□□□□ 0.74
STRA6-201ENST00000323940 PRXQ9BXM0 1461 aa19.64■□□□□ 0.74
STRA6-201ENST00000323940 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.73
STRA6-201ENST00000323940 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
STRA6-201ENST00000323940 CFTRP13569 1480 aa19.62■□□□□ 0.73
STRA6-201ENST00000323940 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
STRA6-201ENST00000323940 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
STRA6-201ENST00000323940 ZNF316A6NFI3 1004 aaPredicted RBP19.5■□□□□ 0.71
STRA6-201ENST00000323940 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
STRA6-201ENST00000323940 ACIN1Q9UKV3 1341 aaKnown RBP19.46■□□□□ 0.71
STRA6-201ENST00000323940 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
STRA6-201ENST00000323940 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
STRA6-201ENST00000323940 CC2D2AQ9P2K1 1620 aa19.41■□□□□ 0.7
STRA6-201ENST00000323940 CUX2O14529 1486 aa19.41■□□□□ 0.7
STRA6-201ENST00000323940 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
STRA6-201ENST00000323940 ARHGAP35Q9NRY4 1499 aa19.4■□□□□ 0.7
STRA6-201ENST00000323940 CENPBP07199 599 aaPredicted RBP19.36■□□□□ 0.69
STRA6-201ENST00000323940 IGF1RP08069 1367 aa19.35■□□□□ 0.69
STRA6-201ENST00000323940 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
STRA6-201ENST00000323940 RRBP1Q9P2E9 1410 aaKnown RBP19.3■□□□□ 0.68
STRA6-201ENST00000323940 DHX57Q6P158 1386 aaKnown RBP19.29■□□□□ 0.68
STRA6-201ENST00000323940 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
STRA6-201ENST00000323940 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
STRA6-201ENST00000323940 CCNB3Q8WWL7 1395 aa19.25■□□□□ 0.67
STRA6-201ENST00000323940 MIER1Q8N108 512 aa19.24■□□□□ 0.67
STRA6-201ENST00000323940 YTHDC1Q96MU7 727 aaKnown RBP19.24■□□□□ 0.67
STRA6-201ENST00000323940 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
STRA6-201ENST00000323940 CLSPNQ9HAW4 1339 aa19.23■□□□□ 0.67
STRA6-201ENST00000323940 ITGAEP38570 1179 aa19.22■□□□□ 0.67
STRA6-201ENST00000323940 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
STRA6-201ENST00000323940 TIAM1Q13009 1591 aa19.18■□□□□ 0.66
STRA6-201ENST00000323940 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
STRA6-201ENST00000323940 P3H3Q8IVL6 736 aa19.14■□□□□ 0.65
STRA6-201ENST00000323940 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
STRA6-201ENST00000323940 NESP48681 1621 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms