RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 NISCHQ9Y2I1 1504 aa31.95■■■□□ 2.71
CHMP5-202ENST00000419016 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
CHMP5-202ENST00000419016 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
CHMP5-202ENST00000419016 ABCC9O60706 1549 aa26.6■■□□□ 1.85
CHMP5-202ENST00000419016 DCAF1Q9Y4B6 1507 aa26.47■■□□□ 1.83
CHMP5-202ENST00000419016 DCAF8L2P0C7V8 631 aa26.32■■□□□ 1.8
CHMP5-202ENST00000419016 MYO15BQ96JP2 1530 aa26.26■■□□□ 1.79
CHMP5-202ENST00000419016 NACADO15069 1562 aa26.11■■□□□ 1.77
CHMP5-202ENST00000419016 RB1CC1Q8TDY2 1594 aa25.91■■□□□ 1.74
CHMP5-202ENST00000419016 SHROOM4Q9ULL8 1493 aa25.76■■□□□ 1.72
CHMP5-202ENST00000419016 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
CHMP5-202ENST00000419016 UNC13AQ9UPW8 1703 aa25.36■■□□□ 1.65
CHMP5-202ENST00000419016 BICRAQ9NZM4 1560 aa25.19■■□□□ 1.62
CHMP5-202ENST00000419016 PABPN1Q86U42 306 aaKnown RBP eCLIP25.04■■□□□ 1.6
CHMP5-202ENST00000419016 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
CHMP5-202ENST00000419016 RSF1Q96T23 1441 aaPredicted RBP24.7■■□□□ 1.54
CHMP5-202ENST00000419016 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
CHMP5-202ENST00000419016 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
CHMP5-202ENST00000419016 MROH2BQ7Z745 1585 aa24.66■■□□□ 1.54
CHMP5-202ENST00000419016 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
CHMP5-202ENST00000419016 EIF4G1Q04637 1599 aaKnown RBP24.41■■□□□ 1.5
CHMP5-202ENST00000419016 WIZO95785 1651 aa24.41■■□□□ 1.5
CHMP5-202ENST00000419016 PEG3Q9GZU2 1588 aa24.36■■□□□ 1.49
CHMP5-202ENST00000419016 ATAD2BQ9ULI0 1458 aa24.27■■□□□ 1.48
CHMP5-202ENST00000419016 SMARCA2P51531 1590 aa24.23■■□□□ 1.47
CHMP5-202ENST00000419016 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
CHMP5-202ENST00000419016 NCAPD3P42695 1498 aa24.14■■□□□ 1.45
CHMP5-202ENST00000419016 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
CHMP5-202ENST00000419016 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
CHMP5-202ENST00000419016 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
CHMP5-202ENST00000419016 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
CHMP5-202ENST00000419016 DNAJC5BQ9UF47 199 aa23.76■■□□□ 1.39
CHMP5-202ENST00000419016 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.36
CHMP5-202ENST00000419016 CFTRP13569 1480 aa23.52■■□□□ 1.36
CHMP5-202ENST00000419016 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
CHMP5-202ENST00000419016 LAMC3Q9Y6N6 1575 aa23.3■■□□□ 1.32
CHMP5-202ENST00000419016 NESP48681 1621 aa23.3■■□□□ 1.32
CHMP5-202ENST00000419016 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
CHMP5-202ENST00000419016 ABCC8Q09428 1581 aa23.3■■□□□ 1.32
CHMP5-202ENST00000419016 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
CHMP5-202ENST00000419016 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
CHMP5-202ENST00000419016 FANCD2Q9BXW9 1451 aa23.18■■□□□ 1.3
CHMP5-202ENST00000419016 SYNJ1O43426 1573 aa23.13■■□□□ 1.29
CHMP5-202ENST00000419016 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
CHMP5-202ENST00000419016 CUX1P39880 1505 aa23.07■■□□□ 1.28
CHMP5-202ENST00000419016 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
CHMP5-202ENST00000419016 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
CHMP5-202ENST00000419016 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
CHMP5-202ENST00000419016 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
CHMP5-202ENST00000419016 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
CHMP5-202ENST00000419016 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
CHMP5-202ENST00000419016 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
CHMP5-202ENST00000419016 SOGA1O94964 1423 aa22.85■■□□□ 1.25
CHMP5-202ENST00000419016 MRC2Q9UBG0 1479 aa22.84■■□□□ 1.25
CHMP5-202ENST00000419016 FGD5Q6ZNL6 1462 aa22.83■■□□□ 1.25
CHMP5-202ENST00000419016 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
CHMP5-202ENST00000419016 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
CHMP5-202ENST00000419016 RUSC2Q8N2Y8 1516 aa22.78■■□□□ 1.24
CHMP5-202ENST00000419016 EEA1Q15075 1411 aa22.77■■□□□ 1.24
CHMP5-202ENST00000419016 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
CHMP5-202ENST00000419016 WDR62O43379 1518 aa22.75■■□□□ 1.23
CHMP5-202ENST00000419016 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
CHMP5-202ENST00000419016 RAD54L2Q9Y4B4 1467 aa22.68■■□□□ 1.22
CHMP5-202ENST00000419016 ABCA10Q8WWZ4 1543 aa22.66■■□□□ 1.22
CHMP5-202ENST00000419016 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
CHMP5-202ENST00000419016 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
CHMP5-202ENST00000419016 CUX2O14529 1486 aa22.64■■□□□ 1.21
CHMP5-202ENST00000419016 LOC105371045A0A1W2PR82 267 aa22.62■■□□□ 1.21
CHMP5-202ENST00000419016 TARBP1Q13395 1621 aaKnown RBP22.61■■□□□ 1.21
CHMP5-202ENST00000419016 WDR97A6NE52 1622 aa22.59■■□□□ 1.21
CHMP5-202ENST00000419016 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
CHMP5-202ENST00000419016 IGF1RP08069 1367 aa22.52■■□□□ 1.2
CHMP5-202ENST00000419016 ABCA5Q8WWZ7 1642 aa22.48■■□□□ 1.19
CHMP5-202ENST00000419016 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
CHMP5-202ENST00000419016 PRXQ9BXM0 1461 aa22.48■■□□□ 1.19
CHMP5-202ENST00000419016 KIF21BO75037 1637 aa22.47■■□□□ 1.19
CHMP5-202ENST00000419016 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
CHMP5-202ENST00000419016 GOLGA3Q08378 1498 aa22.41■■□□□ 1.18
CHMP5-202ENST00000419016 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
CHMP5-202ENST00000419016 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.18
CHMP5-202ENST00000419016 AQRO60306 1485 aaKnown RBP eCLIP22.39■■□□□ 1.177e-7■■■■□ 22.4
CHMP5-202ENST00000419016 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
CHMP5-202ENST00000419016 EHMT2Q96KQ7 1210 aa22.39■■□□□ 1.17
CHMP5-202ENST00000419016 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
CHMP5-202ENST00000419016 TNIKQ9UKE5 1360 aa22.33■■□□□ 1.16
CHMP5-202ENST00000419016 GRIN2BQ13224 1484 aa22.31■■□□□ 1.16
CHMP5-202ENST00000419016 CUL7Q14999 1698 aa22.31■■□□□ 1.16
CHMP5-202ENST00000419016 EIF4G3O43432 1585 aaKnown RBP22.3■■□□□ 1.16
CHMP5-202ENST00000419016 PBRM1Q86U86 1689 aa22.29■■□□□ 1.16
CHMP5-202ENST00000419016 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
CHMP5-202ENST00000419016 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
CHMP5-202ENST00000419016 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
CHMP5-202ENST00000419016 SNAPC4Q5SXM2 1469 aa22.17■■□□□ 1.14
CHMP5-202ENST00000419016 MAGI1Q96QZ7 1491 aaPredicted RBP22.16■■□□□ 1.14
CHMP5-202ENST00000419016 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
CHMP5-202ENST00000419016 SYNJ2O15056 1496 aa22.07■■□□□ 1.12
CHMP5-202ENST00000419016 CLIP1P30622 1438 aa22.04■■□□□ 1.12
CHMP5-202ENST00000419016 GRIN2AQ12879 1464 aa22.04■■□□□ 1.12
CHMP5-202ENST00000419016 CTTNBP2Q8WZ74 1663 aa21.99■■□□□ 1.11
CHMP5-202ENST00000419016 CHMP7Q8WUX9 453 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms