RNA–Protein interactions for RNA: ENST00000453231.6

REEP1-202, Transcript of receptor accessory protein 1, humanhuman

TSL 2 BASIC

Gene REEP1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REEP1-202ENST00000453231 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
REEP1-202ENST00000453231 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
REEP1-202ENST00000453231 ABCC9O60706 1549 aa32.82■■■□□ 2.84
REEP1-202ENST00000453231 RB1CC1Q8TDY2 1594 aa31.22■■■□□ 2.59
REEP1-202ENST00000453231 NACADO15069 1562 aa31.02■■■□□ 2.56
REEP1-202ENST00000453231 DNAJC5BQ9UF47 199 aa30.86■■■□□ 2.53
REEP1-202ENST00000453231 DCAF8L2P0C7V8 631 aa30.83■■■□□ 2.53
REEP1-202ENST00000453231 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
REEP1-202ENST00000453231 MYO15BQ96JP2 1530 aa30.6■■■□□ 2.49
REEP1-202ENST00000453231 PABPN1Q86U42 306 aaKnown RBP eCLIP30.55■■■□□ 2.48
REEP1-202ENST00000453231 BICRAQ9NZM4 1560 aa30.39■■■□□ 2.46
REEP1-202ENST00000453231 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
REEP1-202ENST00000453231 DCAF1Q9Y4B6 1507 aa30.21■■■□□ 2.43
REEP1-202ENST00000453231 SCRIBQ14160 1630 aa29.9■■■□□ 2.38
REEP1-202ENST00000453231 SHROOM4Q9ULL8 1493 aa29.88■■■□□ 2.37
REEP1-202ENST00000453231 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
REEP1-202ENST00000453231 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
REEP1-202ENST00000453231 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
REEP1-202ENST00000453231 NCAPD3P42695 1498 aa28.65■■■□□ 2.18
REEP1-202ENST00000453231 ATAD2BQ9ULI0 1458 aa28.56■■■□□ 2.16
REEP1-202ENST00000453231 SMARCA4P51532 1647 aa28.54■■■□□ 2.16
REEP1-202ENST00000453231 SMARCA2P51531 1590 aa28.45■■■□□ 2.15
REEP1-202ENST00000453231 HMGXB3Q12766 1538 aa28.42■■■□□ 2.14
REEP1-202ENST00000453231 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
REEP1-202ENST00000453231 DNAJC5Q9H3Z4 198 aa28.28■■■□□ 2.12
REEP1-202ENST00000453231 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
REEP1-202ENST00000453231 ERCC6Q03468 1493 aa28.27■■■□□ 2.12
REEP1-202ENST00000453231 CUX2O14529 1486 aa28.26■■■□□ 2.11
REEP1-202ENST00000453231 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
REEP1-202ENST00000453231 NESP48681 1621 aa28.22■■■□□ 2.11
REEP1-202ENST00000453231 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.11
REEP1-202ENST00000453231 LAMC3Q9Y6N6 1575 aa27.99■■■□□ 2.07
REEP1-202ENST00000453231 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
REEP1-202ENST00000453231 WIZO95785 1651 aa27.89■■■□□ 2.06
REEP1-202ENST00000453231 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
REEP1-202ENST00000453231 PDS5BQ9NTI5 1447 aa27.8■■■□□ 2.04
REEP1-202ENST00000453231 CADPSQ9ULU8 1353 aa27.76■■■□□ 2.03
REEP1-202ENST00000453231 RSF1Q96T23 1441 aaPredicted RBP27.6■■■□□ 2.01
REEP1-202ENST00000453231 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
REEP1-202ENST00000453231 WDR62O43379 1518 aa27.53■■■□□ 2
REEP1-202ENST00000453231 TOP2AP11388 1531 aaKnown RBP27.48■■□□□ 1.99
REEP1-202ENST00000453231 CFTRP13569 1480 aa27.46■■□□□ 1.99
REEP1-202ENST00000453231 CEP164Q9UPV0 1460 aa27.45■■□□□ 1.99
REEP1-202ENST00000453231 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
REEP1-202ENST00000453231 URB2Q14146 1524 aaKnown RBP27.25■■□□□ 1.95
REEP1-202ENST00000453231 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
REEP1-202ENST00000453231 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
REEP1-202ENST00000453231 TRIM41Q8WV44 630 aa27■■□□□ 1.91
REEP1-202ENST00000453231 OSCARQ8IYS5 282 aa26.97■■□□□ 1.91
REEP1-202ENST00000453231 TOPBP1Q92547 1522 aa26.94■■□□□ 1.9
REEP1-202ENST00000453231 ZNF608Q9ULD9 1512 aaPredicted RBP26.91■■□□□ 1.9
REEP1-202ENST00000453231 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
REEP1-202ENST00000453231 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
REEP1-202ENST00000453231 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
REEP1-202ENST00000453231 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
REEP1-202ENST00000453231 TARBP1Q13395 1621 aaKnown RBP26.74■■□□□ 1.87
REEP1-202ENST00000453231 RIMBP3CA6NJZ7 1639 aa26.67■■□□□ 1.86
REEP1-202ENST00000453231 RIMBP3BA6NNM3 1639 aa26.67■■□□□ 1.86
REEP1-202ENST00000453231 RIMBP3Q9UFD9 1639 aa26.67■■□□□ 1.86
REEP1-202ENST00000453231 AQRO60306 1485 aaKnown RBP eCLIP26.67■■□□□ 1.86
REEP1-202ENST00000453231 POLA1P09884 1462 aaPredicted RBP26.67■■□□□ 1.86
REEP1-202ENST00000453231 CHD1O14646 1710 aa26.59■■□□□ 1.85
REEP1-202ENST00000453231 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.85
REEP1-202ENST00000453231 ARHGEF11O15085 1522 aa26.55■■□□□ 1.84
REEP1-202ENST00000453231 SOGA1O94964 1423 aa26.53■■□□□ 1.84
REEP1-202ENST00000453231 CUX1P39880 1505 aa26.49■■□□□ 1.83
REEP1-202ENST00000453231 FGD5Q6ZNL6 1462 aa26.49■■□□□ 1.83
REEP1-202ENST00000453231 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
REEP1-202ENST00000453231 FBLN2P98095 1184 aa26.44■■□□□ 1.82
REEP1-202ENST00000453231 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
REEP1-202ENST00000453231 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
REEP1-202ENST00000453231 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
REEP1-202ENST00000453231 CYB5RLQ6IPT4 315 aa26.35■■□□□ 1.81
REEP1-202ENST00000453231 ARAP1Q96P48 1450 aa26.3■■□□□ 1.8
REEP1-202ENST00000453231 GRIN2BQ13224 1484 aa26.29■■□□□ 1.8
REEP1-202ENST00000453231 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
REEP1-202ENST00000453231 CLASP1Q7Z460 1538 aa26.26■■□□□ 1.79
REEP1-202ENST00000453231 CHMP7Q8WUX9 453 aaPredicted RBP26.24■■□□□ 1.79
REEP1-202ENST00000453231 PBRM1Q86U86 1689 aa26.24■■□□□ 1.79
REEP1-202ENST00000453231 SYNJ2O15056 1496 aa26.21■■□□□ 1.79
REEP1-202ENST00000453231 GAPVD1Q14C86 1478 aa26.2■■□□□ 1.78
REEP1-202ENST00000453231 SYNJ1O43426 1573 aa26.2■■□□□ 1.78
REEP1-202ENST00000453231 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
REEP1-202ENST00000453231 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
REEP1-202ENST00000453231 BIVM-ERCC5R4GMW8 1640 aa26.08■■□□□ 1.77
REEP1-202ENST00000453231 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
REEP1-202ENST00000453231 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
REEP1-202ENST00000453231 TRHP20396 242 aaPredicted RBP26.02■■□□□ 1.76
REEP1-202ENST00000453231 GRIN2AQ12879 1464 aa25.97■■□□□ 1.75
REEP1-202ENST00000453231 ADAMTS12P58397 1594 aa25.95■■□□□ 1.75
REEP1-202ENST00000453231 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
REEP1-202ENST00000453231 NUP160Q12769 1436 aa25.88■■□□□ 1.73
REEP1-202ENST00000453231 ERCC6L2Q5T890 1561 aa25.88■■□□□ 1.73
REEP1-202ENST00000453231 ERICH3Q5RHP9 1530 aa25.86■■□□□ 1.73
REEP1-202ENST00000453231 FHAD1B1AJZ9 1412 aa25.86■■□□□ 1.73
REEP1-202ENST00000453231 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
REEP1-202ENST00000453231 PRG4Q92954 1404 aaPredicted RBP25.63■■□□□ 1.69
REEP1-202ENST00000453231 JPH4Q96JJ6 628 aa25.61■■□□□ 1.69
REEP1-202ENST00000453231 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
REEP1-202ENST00000453231 IGF1RP08069 1367 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms