Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD9Q9P000 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD9Q9P000 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD9Q9P000 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD9Q9P000 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD9Q9P000 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.84■□□□□ 0.61
COMMD9Q9P000 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD9Q9P000 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD9Q9P000 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD9Q9P000 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD9Q9P000 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD9Q9P000 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD9Q9P000 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.83■□□□□ 0.61
COMMD9Q9P000 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD9Q9P000 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD9Q9P000 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
COMMD9Q9P000 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD9Q9P000 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
COMMD9Q9P000 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.83■□□□□ 0.6
COMMD9Q9P000 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
COMMD9Q9P000 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD9Q9P000 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
COMMD9Q9P000 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD9Q9P000 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD9Q9P000 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COMMD9Q9P000 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD9Q9P000 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD9Q9P000 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD9Q9P000 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COMMD9Q9P000 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD9Q9P000 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD9Q9P000 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.82■□□□□ 0.6
COMMD9Q9P000 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COMMD9Q9P000 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD9Q9P000 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD9Q9P000 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.82■□□□□ 0.6
COMMD9Q9P000 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD9Q9P000 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
COMMD9Q9P000 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD9Q9P000 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COMMD9Q9P000 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD9Q9P000 ESRRAP2-201ENST00000418437 1549 ntBASIC18.81■□□□□ 0.6
COMMD9Q9P000 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD9Q9P000 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD9Q9P000 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD9Q9P000 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COMMD9Q9P000 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD9Q9P000 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.81■□□□□ 0.6
COMMD9Q9P000 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.81■□□□□ 0.6
COMMD9Q9P000 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD9Q9P000 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.81■□□□□ 0.6
COMMD9Q9P000 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD9Q9P000 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
COMMD9Q9P000 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD9Q9P000 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.8■□□□□ 0.6
COMMD9Q9P000 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD9Q9P000 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD9Q9P000 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD9Q9P000 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COMMD9Q9P000 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD9Q9P000 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.8■□□□□ 0.6
COMMD9Q9P000 AC009831.1-201ENST00000580420 1582 ntBASIC18.8■□□□□ 0.6
COMMD9Q9P000 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COMMD9Q9P000 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COMMD9Q9P000 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD9Q9P000 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD9Q9P000 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD9Q9P000 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COMMD9Q9P000 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.79■□□□□ 0.6
COMMD9Q9P000 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD9Q9P000 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD9Q9P000 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
COMMD9Q9P000 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COMMD9Q9P000 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
COMMD9Q9P000 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD9Q9P000 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD9Q9P000 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD9Q9P000 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD9Q9P000 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD9Q9P000 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
COMMD9Q9P000 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD9Q9P000 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD9Q9P000 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.78■□□□□ 0.6
COMMD9Q9P000 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD9Q9P000 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.78■□□□□ 0.6
COMMD9Q9P000 AC133552.2-201ENST00000619106 1032 ntBASIC18.78■□□□□ 0.6
COMMD9Q9P000 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
COMMD9Q9P000 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD9Q9P000 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.78■□□□□ 0.6
COMMD9Q9P000 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.78■□□□□ 0.6
COMMD9Q9P000 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD9Q9P000 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COMMD9Q9P000 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD9Q9P000 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD9Q9P000 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.77■□□□□ 0.6
COMMD9Q9P000 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COMMD9Q9P000 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.77■□□□□ 0.6
COMMD9Q9P000 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD9Q9P000 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.77■□□□□ 0.6
COMMD9Q9P000 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms