Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.57■■□□□ 1.04
PDX1P52945 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.57■■□□□ 1.04
PDX1P52945 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PDX1P52945 AC004812.2-201ENST00000611079 2094 ntBASIC21.57■■□□□ 1.04
PDX1P52945 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.57■■□□□ 1.04
PDX1P52945 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDX1P52945 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.57■■□□□ 1.04
PDX1P52945 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.56■■□□□ 1.04
PDX1P52945 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDX1P52945 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.56■■□□□ 1.04
PDX1P52945 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDX1P52945 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.56■■□□□ 1.04
PDX1P52945 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.56■■□□□ 1.04
PDX1P52945 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.56■■□□□ 1.04
PDX1P52945 AC027612.3-201ENST00000413684 1047 ntBASIC21.56■■□□□ 1.04
PDX1P52945 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDX1P52945 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.56■■□□□ 1.04
PDX1P52945 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.56■■□□□ 1.04
PDX1P52945 IGHV3-19-201ENST00000521488 291 ntBASIC21.56■■□□□ 1.04
PDX1P52945 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.56■■□□□ 1.04
PDX1P52945 AC022517.1-201ENST00000592429 346 ntBASIC21.56■■□□□ 1.04
PDX1P52945 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PDX1P52945 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.56■■□□□ 1.04
PDX1P52945 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDX1P52945 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.56■■□□□ 1.04
PDX1P52945 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PDX1P52945 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDX1P52945 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.55■■□□□ 1.04
PDX1P52945 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDX1P52945 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDX1P52945 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDX1P52945 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDX1P52945 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDX1P52945 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.55■■□□□ 1.04
PDX1P52945 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDX1P52945 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.55■■□□□ 1.04
PDX1P52945 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDX1P52945 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDX1P52945 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.55■■□□□ 1.04
PDX1P52945 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.55■■□□□ 1.04
PDX1P52945 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.55■■□□□ 1.04
PDX1P52945 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PDX1P52945 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.55■■□□□ 1.04
PDX1P52945 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.55■■□□□ 1.04
PDX1P52945 RARRES2P11-201ENST00000635158 484 ntBASIC21.55■■□□□ 1.04
PDX1P52945 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.55■■□□□ 1.04
PDX1P52945 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDX1P52945 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PDX1P52945 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDX1P52945 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDX1P52945 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDX1P52945 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDX1P52945 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
PDX1P52945 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDX1P52945 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDX1P52945 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.54■■□□□ 1.04
PDX1P52945 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDX1P52945 AC092437.1-201ENST00000624794 1048 ntBASIC21.54■■□□□ 1.04
PDX1P52945 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDX1P52945 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDX1P52945 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
PDX1P52945 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDX1P52945 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.53■■□□□ 1.04
PDX1P52945 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PDX1P52945 AC090192.1-201ENST00000517740 490 ntBASIC21.53■■□□□ 1.04
PDX1P52945 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.53■■□□□ 1.04
PDX1P52945 MIR6084-201ENST00000622012 110 ntBASIC21.53■■□□□ 1.04
PDX1P52945 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDX1P52945 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDX1P52945 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDX1P52945 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDX1P52945 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDX1P52945 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDX1P52945 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDX1P52945 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDX1P52945 AC133637.1-201ENST00000624115 1537 ntBASIC21.52■■□□□ 1.04
PDX1P52945 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDX1P52945 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDX1P52945 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDX1P52945 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDX1P52945 AL358852.1-201ENST00000623174 1268 ntBASIC21.52■■□□□ 1.04
PDX1P52945 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDX1P52945 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PDX1P52945 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDX1P52945 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.52■■□□□ 1.03
PDX1P52945 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.52■■□□□ 1.03
PDX1P52945 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDX1P52945 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDX1P52945 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PDX1P52945 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDX1P52945 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PDX1P52945 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDX1P52945 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDX1P52945 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDX1P52945 MIR572-201ENST00000384983 95 ntBASIC21.51■■□□□ 1.03
PDX1P52945 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.51■■□□□ 1.03
PDX1P52945 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDX1P52945 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.51■■□□□ 1.03
PDX1P52945 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.51■■□□□ 1.03
PDX1P52945 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms