Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHATP28329 AL353803.4-201ENST00000565882 1934 ntBASIC18.88■□□□□ 0.61
CHATP28329 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHATP28329 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHATP28329 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.88■□□□□ 0.61
CHATP28329 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.88■□□□□ 0.61
CHATP28329 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHATP28329 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHATP28329 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHATP28329 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHATP28329 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHATP28329 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHATP28329 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.88■□□□□ 0.61
CHATP28329 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHATP28329 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CHATP28329 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHATP28329 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHATP28329 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHATP28329 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHATP28329 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHATP28329 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.87■□□□□ 0.61
CHATP28329 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.87■□□□□ 0.61
CHATP28329 AC242852.2-201ENST00000615738 1807 ntBASIC18.87■□□□□ 0.61
CHATP28329 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHATP28329 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHATP28329 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHATP28329 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHATP28329 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.86■□□□□ 0.61
CHATP28329 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.86■□□□□ 0.61
CHATP28329 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHATP28329 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHATP28329 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.86■□□□□ 0.61
CHATP28329 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.86■□□□□ 0.61
CHATP28329 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.86■□□□□ 0.61
CHATP28329 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHATP28329 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.86■□□□□ 0.61
CHATP28329 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHATP28329 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHATP28329 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CHATP28329 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.86■□□□□ 0.61
CHATP28329 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHATP28329 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHATP28329 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHATP28329 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.86■□□□□ 0.61
CHATP28329 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.85■□□□□ 0.61
CHATP28329 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.85■□□□□ 0.61
CHATP28329 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHATP28329 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
CHATP28329 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHATP28329 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHATP28329 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHATP28329 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHATP28329 MIR4508-201ENST00000584178 70 ntBASIC18.85■□□□□ 0.61
CHATP28329 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHATP28329 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHATP28329 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHATP28329 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHATP28329 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.85■□□□□ 0.61
CHATP28329 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.84■□□□□ 0.61
CHATP28329 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CHATP28329 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.84■□□□□ 0.61
CHATP28329 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.84■□□□□ 0.61
CHATP28329 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.84■□□□□ 0.61
CHATP28329 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHATP28329 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHATP28329 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHATP28329 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHATP28329 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CHATP28329 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHATP28329 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHATP28329 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHATP28329 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHATP28329 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHATP28329 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHATP28329 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.83■□□□□ 0.6
CHATP28329 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHATP28329 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHATP28329 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.83■□□□□ 0.6
CHATP28329 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHATP28329 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.82■□□□□ 0.6
CHATP28329 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHATP28329 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHATP28329 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHATP28329 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.82■□□□□ 0.6
CHATP28329 SNX5-217ENST00000606557 1087 ntBASIC18.82■□□□□ 0.6
CHATP28329 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHATP28329 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.82■□□□□ 0.6
CHATP28329 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHATP28329 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms