RNA–Protein interactions for RNA: ENST00000514033.1

KLF3-203, Transcript of Kruppel like factor 3, humanhuman

TSL 1 (best) BASIC

Gene KLF3, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-203ENST00000514033 NISCHQ9Y2I1 1504 aa48.41■■■■■ 5.34
KLF3-203ENST00000514033 CCDC180Q9P1Z9 1646 aa41.91■■■■■ 4.3
KLF3-203ENST00000514033 ZCCHC6Q5VYS8 1495 aaKnown RBP40.77■■■■■ 4.12
KLF3-203ENST00000514033 DCAF1Q9Y4B6 1507 aa39.99■■■■□ 3.99
KLF3-203ENST00000514033 SHROOM4Q9ULL8 1493 aa39.95■■■■□ 3.99
KLF3-203ENST00000514033 DCAF8L2P0C7V8 631 aa39.9■■■■□ 3.98
KLF3-203ENST00000514033 ABCC9O60706 1549 aa39.88■■■■□ 3.97
KLF3-203ENST00000514033 MYO15BQ96JP2 1530 aa39.3■■■■□ 3.88
KLF3-203ENST00000514033 NACADO15069 1562 aa38.94■■■■□ 3.82
KLF3-203ENST00000514033 SCRIBQ14160 1630 aa38.71■■■■□ 3.79
KLF3-203ENST00000514033 SUPT5HO00267 1087 aaKnown RBP38.69■■■■□ 3.78
KLF3-203ENST00000514033 RB1CC1Q8TDY2 1594 aa38.51■■■■□ 3.76
KLF3-203ENST00000514033 UNC13AQ9UPW8 1703 aa37.83■■■■□ 3.65
KLF3-203ENST00000514033 RSF1Q96T23 1441 aaPredicted RBP37.78■■■■□ 3.64
KLF3-203ENST00000514033 CECR2Q9BXF3 1484 aa37.62■■■■□ 3.61
KLF3-203ENST00000514033 BICRAQ9NZM4 1560 aa37.45■■■■□ 3.59
KLF3-203ENST00000514033 MROH2BQ7Z745 1585 aa37.45■■■■□ 3.59
KLF3-203ENST00000514033 PABPN1Q86U42 306 aaKnown RBP eCLIP37.35■■■■□ 3.57
KLF3-203ENST00000514033 BAZ1AQ9NRL2 1556 aaPredicted RBP37.33■■■■□ 3.57
KLF3-203ENST00000514033 CHIC1Q5VXU3 224 aa37.29■■■■□ 3.56
KLF3-203ENST00000514033 WIZO95785 1651 aa37.17■■■■□ 3.54
KLF3-203ENST00000514033 SMARCA4P51532 1647 aa37.1■■■■□ 3.53
KLF3-203ENST00000514033 TOP2AP11388 1531 aaKnown RBP36.77■■■■□ 3.48
KLF3-203ENST00000514033 PEG3Q9GZU2 1588 aa36.6■■■■□ 3.45
KLF3-203ENST00000514033 SMARCA2P51531 1590 aa36.46■■■■□ 3.43
KLF3-203ENST00000514033 CCDC88BA6NC98 1476 aa36.44■■■■□ 3.42
KLF3-203ENST00000514033 ATAD2BQ9ULI0 1458 aa36.38■■■■□ 3.41
KLF3-203ENST00000514033 EIF4G1Q04637 1599 aaKnown RBP36.37■■■■□ 3.41
KLF3-203ENST00000514033 TRIM41Q8WV44 630 aa36.31■■■■□ 3.4
KLF3-203ENST00000514033 BAZ1BQ9UIG0 1483 aaKnown RBP36.21■■■■□ 3.39
KLF3-203ENST00000514033 CC2D2AQ9P2K1 1620 aa36.09■■■■□ 3.37
KLF3-203ENST00000514033 DNAJC5BQ9UF47 199 aa36.09■■■■□ 3.37
KLF3-203ENST00000514033 NCAPD3P42695 1498 aa35.96■■■■□ 3.35
KLF3-203ENST00000514033 HMGXB3Q12766 1538 aa35.94■■■■□ 3.34
KLF3-203ENST00000514033 LOC105371045A0A1W2PR82 267 aa35.91■■■■□ 3.34
KLF3-203ENST00000514033 ABCC8Q09428 1581 aa35.85■■■■□ 3.33
KLF3-203ENST00000514033 FAM9AQ8IZU1 332 aaPredicted RBP35.71■■■■□ 3.31
KLF3-203ENST00000514033 WRNQ14191 1432 aaPredicted RBP eCLIP35.54■■■■□ 3.281e-6■■■■■ 58.5
KLF3-203ENST00000514033 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
KLF3-203ENST00000514033 CFTRP13569 1480 aa35.31■■■■□ 3.24
KLF3-203ENST00000514033 SOGA1O94964 1423 aa35.3■■■■□ 3.24
KLF3-203ENST00000514033 EEA1Q15075 1411 aa35.28■■■■□ 3.24
KLF3-203ENST00000514033 EHMT2Q96KQ7 1210 aa35.22■■■■□ 3.23
KLF3-203ENST00000514033 TOP2BQ02880 1626 aa35.17■■■■□ 3.22
KLF3-203ENST00000514033 RUSC2Q8N2Y8 1516 aa35.14■■■■□ 3.22
KLF3-203ENST00000514033 BIVM-ERCC5R4GMW8 1640 aa35.11■■■■□ 3.21
KLF3-203ENST00000514033 PRDM2Q13029 1718 aa35.1■■■■□ 3.21
KLF3-203ENST00000514033 CADPSQ9ULU8 1353 aa35.1■■■■□ 3.21
KLF3-203ENST00000514033 CSRNP3Q8WYN3 585 aa35.08■■■■□ 3.21
KLF3-203ENST00000514033 CUX1P39880 1505 aa34.98■■■■□ 3.19
KLF3-203ENST00000514033 GOLGA3Q08378 1498 aa34.84■■■■□ 3.17
KLF3-203ENST00000514033 TNIKQ9UKE5 1360 aa34.84■■■■□ 3.17
KLF3-203ENST00000514033 PCGF6Q9BYE7 350 aa34.81■■■■□ 3.16
KLF3-203ENST00000514033 KIF21BO75037 1637 aa34.8■■■■□ 3.16
KLF3-203ENST00000514033 CEP164Q9UPV0 1460 aa34.79■■■■□ 3.16
KLF3-203ENST00000514033 NESP48681 1621 aa34.73■■■■□ 3.15
KLF3-203ENST00000514033 FANCD2Q9BXW9 1451 aa34.72■■■■□ 3.15
KLF3-203ENST00000514033 CEP162Q5TB80 1403 aa34.7■■■■□ 3.15
KLF3-203ENST00000514033 UBTFP17480 764 aaKnown RBP34.69■■■■□ 3.14
KLF3-203ENST00000514033 TRIM26Q12899 539 aaPredicted RBP34.65■■■■□ 3.14
KLF3-203ENST00000514033 LAMC3Q9Y6N6 1575 aa34.64■■■■□ 3.14
KLF3-203ENST00000514033 KIF27Q86VH2 1401 aa34.59■■■■□ 3.13
KLF3-203ENST00000514033 RAPGEF2Q9Y4G8 1499 aa34.54■■■■□ 3.12
KLF3-203ENST00000514033 FGD5Q6ZNL6 1462 aa34.52■■■■□ 3.12
KLF3-203ENST00000514033 PRXQ9BXM0 1461 aa34.49■■■■□ 3.11
KLF3-203ENST00000514033 DNMBPQ6XZF7 1577 aa34.48■■■■□ 3.11
KLF3-203ENST00000514033 ERICH3Q5RHP9 1530 aa34.46■■■■□ 3.11
KLF3-203ENST00000514033 CUX2O14529 1486 aa34.4■■■■□ 3.1
KLF3-203ENST00000514033 TOPBP1Q92547 1522 aa34.4■■■■□ 3.1
KLF3-203ENST00000514033 PDS5BQ9NTI5 1447 aa34.38■■■■□ 3.09
KLF3-203ENST00000514033 KIF21AQ7Z4S6 1674 aa34.34■■■■□ 3.09
KLF3-203ENST00000514033 CLIP1P30622 1438 aa34.32■■■■□ 3.08
KLF3-203ENST00000514033 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
KLF3-203ENST00000514033 URB2Q14146 1524 aaKnown RBP34.26■■■■□ 3.07
KLF3-203ENST00000514033 ERCC6Q03468 1493 aa34.25■■■■□ 3.07
KLF3-203ENST00000514033 IGF1RP08069 1367 aa34.24■■■■□ 3.07
KLF3-203ENST00000514033 HRCP23327 699 aa34.22■■■■□ 3.07
KLF3-203ENST00000514033 PPARGC1BQ86YN6 1023 aaKnown RBP34.21■■■■□ 3.07
KLF3-203ENST00000514033 ABCA10Q8WWZ4 1543 aa34.21■■■■□ 3.07
KLF3-203ENST00000514033 RAD54L2Q9Y4B4 1467 aa34.19■■■■□ 3.06
KLF3-203ENST00000514033 VPS8Q8N3P4 1428 aa34.08■■■■□ 3.05
KLF3-203ENST00000514033 CARMIL1Q5VZK9 1371 aa34.08■■■■□ 3.05
KLF3-203ENST00000514033 THOC2Q8NI27 1593 aaKnown RBP34.05■■■■□ 3.04
KLF3-203ENST00000514033 WDR97A6NE52 1622 aa34.02■■■■□ 3.04
KLF3-203ENST00000514033 RANGAP1P46060 587 aaPredicted RBP34.02■■■■□ 3.04
KLF3-203ENST00000514033 MRC2Q9UBG0 1479 aa33.97■■■■□ 3.03
KLF3-203ENST00000514033 ARAP1Q96P48 1450 aa33.92■■■■□ 3.02
KLF3-203ENST00000514033 CUL7Q14999 1698 aa33.89■■■■□ 3.02
KLF3-203ENST00000514033 ABCA5Q8WWZ7 1642 aa33.87■■■■□ 3.01
KLF3-203ENST00000514033 WDR62O43379 1518 aa33.87■■■■□ 3.01
KLF3-203ENST00000514033 TTBK1Q5TCY1 1321 aaPredicted RBP33.84■■■■□ 3.01
KLF3-203ENST00000514033 TARBP1Q13395 1621 aaKnown RBP33.83■■■■□ 3.01
KLF3-203ENST00000514033 TDRD9Q8NDG6 1382 aaKnown RBP33.82■■■■□ 3
KLF3-203ENST00000514033 ARHGAP35Q9NRY4 1499 aa33.81■■■■□ 3
KLF3-203ENST00000514033 GAPVD1Q14C86 1478 aa33.8■■■■□ 3
KLF3-203ENST00000514033 APLP2Q06481 763 aa33.77■■■■□ 3
KLF3-203ENST00000514033 CTTNBP2Q8WZ74 1663 aa33.59■■■□□ 2.97
KLF3-203ENST00000514033 IFT140Q96RY7 1462 aa33.57■■■□□ 2.97
KLF3-203ENST00000514033 PBRM1Q86U86 1689 aa33.55■■■□□ 2.96
KLF3-203ENST00000514033 ZEB1P37275 1124 aaPredicted RBP33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms