Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 AC092068.2-201ENST00000590491 1708 ntBASIC20.02■□□□□ 0.79
RAF1P04049 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.01■□□□□ 0.79
RAF1P04049 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
RAF1P04049 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAF1P04049 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAF1P04049 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
RAF1P04049 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RAF1P04049 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RAF1P04049 SRD5A1P1-201ENST00000442297 786 ntBASIC20.01■□□□□ 0.79
RAF1P04049 SUDS3P1-201ENST00000505831 966 ntBASIC20.01■□□□□ 0.79
RAF1P04049 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.01■□□□□ 0.79
RAF1P04049 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.01■□□□□ 0.79
RAF1P04049 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAF1P04049 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAF1P04049 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.01■□□□□ 0.79
RAF1P04049 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAF1P04049 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAF1P04049 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RAF1P04049 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAF1P04049 EDA-201ENST00000338901 1233 ntBASIC20■□□□□ 0.79
RAF1P04049 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20■□□□□ 0.79
RAF1P04049 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20■□□□□ 0.79
RAF1P04049 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20■□□□□ 0.79
RAF1P04049 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20■□□□□ 0.79
RAF1P04049 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
RAF1P04049 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAF1P04049 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RAF1P04049 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAF1P04049 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.99■□□□□ 0.79
RAF1P04049 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.99■□□□□ 0.79
RAF1P04049 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAF1P04049 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.99■□□□□ 0.79
RAF1P04049 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAF1P04049 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.99■□□□□ 0.79
RAF1P04049 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.99■□□□□ 0.79
RAF1P04049 SNX5-217ENST00000606557 1087 ntBASIC19.99■□□□□ 0.79
RAF1P04049 AL031432.3-201ENST00000607698 485 ntBASIC19.99■□□□□ 0.79
RAF1P04049 AL355001.2-201ENST00000620617 1191 ntBASIC19.99■□□□□ 0.79
RAF1P04049 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.99■□□□□ 0.79
RAF1P04049 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAF1P04049 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAF1P04049 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAF1P04049 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAF1P04049 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAF1P04049 DUSP8P3-201ENST00000399571 1760 ntBASIC19.98■□□□□ 0.79
RAF1P04049 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAF1P04049 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAF1P04049 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAF1P04049 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
RAF1P04049 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.98■□□□□ 0.79
RAF1P04049 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.98■□□□□ 0.79
RAF1P04049 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.98■□□□□ 0.79
RAF1P04049 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RAF1P04049 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAF1P04049 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAF1P04049 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAF1P04049 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAF1P04049 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAF1P04049 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAF1P04049 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAF1P04049 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.97■□□□□ 0.79
RAF1P04049 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAF1P04049 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.97■□□□□ 0.79
RAF1P04049 AC233723.2-201ENST00000623798 2106 ntBASIC19.97■□□□□ 0.79
RAF1P04049 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAF1P04049 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAF1P04049 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAF1P04049 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RAF1P04049 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAF1P04049 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAF1P04049 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RAF1P04049 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RAF1P04049 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAF1P04049 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAF1P04049 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.96■□□□□ 0.79
RAF1P04049 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAF1P04049 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.96■□□□□ 0.79
RAF1P04049 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAF1P04049 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.96■□□□□ 0.79
RAF1P04049 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RAF1P04049 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAF1P04049 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RAF1P04049 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.96■□□□□ 0.79
RAF1P04049 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RAF1P04049 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.95■□□□□ 0.78
RAF1P04049 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAF1P04049 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.95■□□□□ 0.78
RAF1P04049 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAF1P04049 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.95■□□□□ 0.78
RAF1P04049 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAF1P04049 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAF1P04049 AC024257.2-201ENST00000549699 147 ntBASIC19.95■□□□□ 0.78
RAF1P04049 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RAF1P04049 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RAF1P04049 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAF1P04049 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAF1P04049 AC090877.2-201ENST00000558441 1738 ntBASIC19.95■□□□□ 0.78
RAF1P04049 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RAF1P04049 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RAF1P04049 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms