Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 SAMD12-201ENST00000314727 2172 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
SVIPQ8NHG7 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
SVIPQ8NHG7 ARSF-201ENST00000359361 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
SVIPQ8NHG7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
SVIPQ8NHG7 MROH7-201ENST00000339553 3459 ntTSL 5 BASIC8.02□□□□□ -1.12
SVIPQ8NHG7 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
SVIPQ8NHG7 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
SVIPQ8NHG7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 NCAM1-201ENST00000316851 5837 ntTSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 OGDH-205ENST00000444676 3309 ntTSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 AC022486.1-201ENST00000510613 1483 ntTSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ENTPD3-AS1-202ENST00000425156 2036 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 KLK10-201ENST00000309958 3111 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ZNF319-201ENST00000299237 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 AL158212.3-201ENST00000564352 4237 ntBASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ZDHHC9-201ENST00000357166 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 BRD7P5-201ENST00000299197 1822 ntBASIC8.02□□□□□ -1.13
SVIPQ8NHG7 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 AL138720.1-202ENST00000437648 1017 ntTSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 RPL7P3-201ENST00000441388 714 ntBASIC8.02□□□□□ -1.13
SVIPQ8NHG7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 LAMTOR5-AS1-202ENST00000457535 817 ntTSL 3 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 AC009800.1-201ENST00000511357 1006 ntBASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 AC090953.1-201ENST00000604305 1092 ntBASIC8.02□□□□□ -1.13
SVIPQ8NHG7 AC253536.6-201ENST00000609736 663 ntBASIC8.02□□□□□ -1.13
SVIPQ8NHG7 AC107905.1-201ENST00000616204 426 ntBASIC8.02□□□□□ -1.13
SVIPQ8NHG7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ARHGEF3-201ENST00000296315 3602 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 SEC14L3-201ENST00000215812 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 SH3BGRL2-201ENST00000369838 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 NOD1-201ENST00000222823 4499 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 TSNAX-DISC1-205ENST00000602962 3557 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ITGA7-213ENST00000555728 3930 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 RCAN3-208ENST00000610732 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 TMEM2-206ENST00000396272 1437 ntTSL 2 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 PASK-202ENST00000358649 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 NREP-201ENST00000257435 2013 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC8.02□□□□□ -1.13
SVIPQ8NHG7 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 CAMKK2-216ENST00000545538 3797 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 DNAJC3-201ENST00000376795 2273 ntTSL 5 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 KRT18P59-202ENST00000534728 3338 ntTSL 2 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 NTRK3-207ENST00000542733 2287 ntTSL 2 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 TRIM51HP-202ENST00000530412 1823 ntBASIC8.01□□□□□ -1.13
SVIPQ8NHG7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 ST5-237ENST00000530991 3396 ntTSL 2 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 EIF2B2-201ENST00000266126 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 MSC-AS1-201ENST00000457356 4220 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 ASNSP1-202ENST00000641079 1352 ntBASIC8.01□□□□□ -1.13
SVIPQ8NHG7 NDRG4-203ENST00000394279 3431 ntTSL 5 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 CCNB1IP1-204ENST00000398163 1604 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
SVIPQ8NHG7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms