RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 NISCHQ9Y2I1 1504 aa18.03■□□□□ 0.48
MSC-AS1-201ENST00000457356 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.42
MSC-AS1-201ENST00000457356 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
MSC-AS1-201ENST00000457356 ABCC9O60706 1549 aa16.08■□□□□ 0.16
MSC-AS1-201ENST00000457356 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.15
MSC-AS1-201ENST00000457356 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
MSC-AS1-201ENST00000457356 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
MSC-AS1-201ENST00000457356 PCGF6Q9BYE7 350 aa15.47■□□□□ 0.07
MSC-AS1-201ENST00000457356 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
MSC-AS1-201ENST00000457356 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
MSC-AS1-201ENST00000457356 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
MSC-AS1-201ENST00000457356 HRCP23327 699 aa15.14■□□□□ 0.01
MSC-AS1-201ENST00000457356 FAM9AQ8IZU1 332 aaPredicted RBP15.12■□□□□ 0.01
MSC-AS1-201ENST00000457356 TTBK1Q5TCY1 1321 aaPredicted RBP15.1■□□□□ 0.01
MSC-AS1-201ENST00000457356 CENPBP07199 599 aaPredicted RBP15.04■□□□□ -0
MSC-AS1-201ENST00000457356 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
MSC-AS1-201ENST00000457356 SCRIBQ14160 1630 aa14.94□□□□□ -0.02
MSC-AS1-201ENST00000457356 RANGAP1P46060 587 aaPredicted RBP14.92□□□□□ -0.02
MSC-AS1-201ENST00000457356 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
MSC-AS1-201ENST00000457356 MYT1Q01538 1121 aa14.9□□□□□ -0.02
MSC-AS1-201ENST00000457356 CCER1Q8TC90 406 aaPredicted RBP14.88□□□□□ -0.03
MSC-AS1-201ENST00000457356 YTHDC1Q96MU7 727 aaKnown RBP14.87□□□□□ -0.03
MSC-AS1-201ENST00000457356 ZCCHC6Q5VYS8 1495 aaKnown RBP14.86□□□□□ -0.03
MSC-AS1-201ENST00000457356 ZEB1P37275 1124 aaPredicted RBP14.86□□□□□ -0.03
MSC-AS1-201ENST00000457356 APLP2Q06481 763 aa14.86□□□□□ -0.03
MSC-AS1-201ENST00000457356 ERICH6Q7L0X2 663 aa14.84□□□□□ -0.03
MSC-AS1-201ENST00000457356 NACADO15069 1562 aa14.79□□□□□ -0.04
MSC-AS1-201ENST00000457356 ATP1B4Q9UN42 357 aaPredicted RBP14.77□□□□□ -0.05
MSC-AS1-201ENST00000457356 UBTFP17480 764 aaKnown RBP14.7□□□□□ -0.06
MSC-AS1-201ENST00000457356 FBLN2P98095 1184 aa14.65□□□□□ -0.06
MSC-AS1-201ENST00000457356 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
MSC-AS1-201ENST00000457356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
MSC-AS1-201ENST00000457356 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
MSC-AS1-201ENST00000457356 TRIM26Q12899 539 aaPredicted RBP14.53□□□□□ -0.08
MSC-AS1-201ENST00000457356 NEFLP07196 543 aa14.52□□□□□ -0.08
MSC-AS1-201ENST00000457356 LOC105371045A0A1W2PR82 267 aa14.48□□□□□ -0.09
MSC-AS1-201ENST00000457356 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
MSC-AS1-201ENST00000457356 MYT1LQ9UL68 1186 aa14.39□□□□□ -0.11
MSC-AS1-201ENST00000457356 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
MSC-AS1-201ENST00000457356 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
MSC-AS1-201ENST00000457356 BAZ1BQ9UIG0 1483 aaKnown RBP14.3□□□□□ -0.12
MSC-AS1-201ENST00000457356 CHIC1Q5VXU3 224 aa14.28□□□□□ -0.12
MSC-AS1-201ENST00000457356 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
MSC-AS1-201ENST00000457356 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
MSC-AS1-201ENST00000457356 ACIN1Q9UKV3 1341 aaKnown RBP14.22□□□□□ -0.13
MSC-AS1-201ENST00000457356 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
MSC-AS1-201ENST00000457356 MYO15BQ96JP2 1530 aa14.2□□□□□ -0.14
MSC-AS1-201ENST00000457356 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
MSC-AS1-201ENST00000457356 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
MSC-AS1-201ENST00000457356 ITGAEP38570 1179 aa14.14□□□□□ -0.15
MSC-AS1-201ENST00000457356 RSF1Q96T23 1441 aaPredicted RBP14.14□□□□□ -0.15
MSC-AS1-201ENST00000457356 CNGB1Q14028 1251 aaPredicted RBP14.12□□□□□ -0.15
MSC-AS1-201ENST00000457356 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
MSC-AS1-201ENST00000457356 ARID3CA6NKF2 412 aa14.09□□□□□ -0.15
MSC-AS1-201ENST00000457356 P3H3Q8IVL6 736 aa14.09□□□□□ -0.15
MSC-AS1-201ENST00000457356 BCANQ96GW7 911 aa14.07□□□□□ -0.16
MSC-AS1-201ENST00000457356 DAXXQ9UER7 740 aaPredicted RBP14.04□□□□□ -0.16
MSC-AS1-201ENST00000457356 POLR3GLQ9BT43 218 aa14.02□□□□□ -0.16
MSC-AS1-201ENST00000457356 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
MSC-AS1-201ENST00000457356 SMARCA2P51531 1590 aa14□□□□□ -0.17
MSC-AS1-201ENST00000457356 BCL11AQ9H165 835 aa14□□□□□ -0.17
MSC-AS1-201ENST00000457356 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
MSC-AS1-201ENST00000457356 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
MSC-AS1-201ENST00000457356 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
MSC-AS1-201ENST00000457356 RTL5Q5HYW3 569 aaPredicted RBP13.95□□□□□ -0.18
MSC-AS1-201ENST00000457356 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
MSC-AS1-201ENST00000457356 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
MSC-AS1-201ENST00000457356 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
MSC-AS1-201ENST00000457356 EIF4G1Q04637 1599 aaKnown RBP13.85□□□□□ -0.19
MSC-AS1-201ENST00000457356 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
MSC-AS1-201ENST00000457356 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
MSC-AS1-201ENST00000457356 FAM50AQ14320 339 aaKnown RBP13.81□□□□□ -0.2
MSC-AS1-201ENST00000457356 ZNF777Q9ULD5 760 aaPredicted RBP13.8□□□□□ -0.2
MSC-AS1-201ENST00000457356 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
MSC-AS1-201ENST00000457356 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.2
MSC-AS1-201ENST00000457356 SMARCA4P51532 1647 aa13.76□□□□□ -0.21
MSC-AS1-201ENST00000457356 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
MSC-AS1-201ENST00000457356 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
MSC-AS1-201ENST00000457356 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
MSC-AS1-201ENST00000457356 CLSPNQ9HAW4 1339 aa13.74□□□□□ -0.21
MSC-AS1-201ENST00000457356 KCNH8Q96L42 1107 aa13.74□□□□□ -0.21
MSC-AS1-201ENST00000457356 CC2D2AQ9P2K1 1620 aa13.74□□□□□ -0.21
MSC-AS1-201ENST00000457356 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
MSC-AS1-201ENST00000457356 WIZO95785 1651 aa13.72□□□□□ -0.21
MSC-AS1-201ENST00000457356 KIF27Q86VH2 1401 aa13.71□□□□□ -0.21
MSC-AS1-201ENST00000457356 NCAPD3P42695 1498 aa13.71□□□□□ -0.22
MSC-AS1-201ENST00000457356 SOGA1O94964 1423 aa13.69□□□□□ -0.22
MSC-AS1-201ENST00000457356 CUX2O14529 1486 aa13.67□□□□□ -0.22
MSC-AS1-201ENST00000457356 ANP32EQ9BTT0 268 aa13.66□□□□□ -0.22
MSC-AS1-201ENST00000457356 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
MSC-AS1-201ENST00000457356 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
MSC-AS1-201ENST00000457356 EIF5BO60841 1220 aaKnown RBP13.64□□□□□ -0.23
MSC-AS1-201ENST00000457356 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
MSC-AS1-201ENST00000457356 TRIM52Q96A61 297 aa13.64□□□□□ -0.23
MSC-AS1-201ENST00000457356 BICRAQ9NZM4 1560 aa13.62□□□□□ -0.23
MSC-AS1-201ENST00000457356 ANP32CO43423 234 aa13.61□□□□□ -0.23
MSC-AS1-201ENST00000457356 PLEKHD1A6NEE1 506 aa13.6□□□□□ -0.23
MSC-AS1-201ENST00000457356 CYB5RLQ6IPT4 315 aa13.6□□□□□ -0.23
MSC-AS1-201ENST00000457356 FKBP8Q14318 412 aa13.59□□□□□ -0.23
MSC-AS1-201ENST00000457356 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms