RNA–Protein interactions for RNA: ENST00000555728.5

ITGA7-213, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ITGA7, Length 3,930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-213ENST00000555728 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
ITGA7-213ENST00000555728 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
ITGA7-213ENST00000555728 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.8
ITGA7-213ENST00000555728 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
ITGA7-213ENST00000555728 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
ITGA7-213ENST00000555728 PCGF6Q9BYE7 350 aa18.96■□□□□ 0.63
ITGA7-213ENST00000555728 ABCC9O60706 1549 aa18.85■□□□□ 0.61
ITGA7-213ENST00000555728 FAM9AQ8IZU1 332 aaPredicted RBP18.82■□□□□ 0.6
ITGA7-213ENST00000555728 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
ITGA7-213ENST00000555728 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
ITGA7-213ENST00000555728 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
ITGA7-213ENST00000555728 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
ITGA7-213ENST00000555728 LOC105371045A0A1W2PR82 267 aa18.29■□□□□ 0.52
ITGA7-213ENST00000555728 PPARGC1BQ86YN6 1023 aaKnown RBP18.25■□□□□ 0.51
ITGA7-213ENST00000555728 HRCP23327 699 aa18.24■□□□□ 0.51
ITGA7-213ENST00000555728 PABPN1Q86U42 306 aaKnown RBP eCLIP18.24■□□□□ 0.51
ITGA7-213ENST00000555728 ZCCHC6Q5VYS8 1495 aaKnown RBP18.18■□□□□ 0.5
ITGA7-213ENST00000555728 RANGAP1P46060 587 aaPredicted RBP18.16■□□□□ 0.5
ITGA7-213ENST00000555728 APLP2Q06481 763 aa18.16■□□□□ 0.5
ITGA7-213ENST00000555728 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
ITGA7-213ENST00000555728 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
ITGA7-213ENST00000555728 TRIM26Q12899 539 aaPredicted RBP18.04■□□□□ 0.48
ITGA7-213ENST00000555728 UBTFP17480 764 aaKnown RBP17.97■□□□□ 0.47
ITGA7-213ENST00000555728 CENPBP07199 599 aaPredicted RBP17.89■□□□□ 0.45
ITGA7-213ENST00000555728 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
ITGA7-213ENST00000555728 YTHDC1Q96MU7 727 aaKnown RBP17.84■□□□□ 0.45
ITGA7-213ENST00000555728 PELP1Q8IZL8 1130 aaKnown RBP17.8■□□□□ 0.44
ITGA7-213ENST00000555728 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
ITGA7-213ENST00000555728 NACADO15069 1562 aa17.71■□□□□ 0.43
ITGA7-213ENST00000555728 ATP1B4Q9UN42 357 aaPredicted RBP17.67■□□□□ 0.42
ITGA7-213ENST00000555728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
ITGA7-213ENST00000555728 DCAF1Q9Y4B6 1507 aa17.59■□□□□ 0.41
ITGA7-213ENST00000555728 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
ITGA7-213ENST00000555728 ITGAEP38570 1179 aa17.47■□□□□ 0.39
ITGA7-213ENST00000555728 DIEXFQ68CQ4 756 aaKnown RBP17.39■□□□□ 0.37
ITGA7-213ENST00000555728 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
ITGA7-213ENST00000555728 CECR2Q9BXF3 1484 aa17.25■□□□□ 0.35
ITGA7-213ENST00000555728 NEFLP07196 543 aa17.23■□□□□ 0.35
ITGA7-213ENST00000555728 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
ITGA7-213ENST00000555728 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
ITGA7-213ENST00000555728 ERICH6Q7L0X2 663 aa17.18■□□□□ 0.34
ITGA7-213ENST00000555728 CNGB1Q14028 1251 aaPredicted RBP17.06■□□□□ 0.32
ITGA7-213ENST00000555728 BAZ1AQ9NRL2 1556 aaPredicted RBP17.01■□□□□ 0.31
ITGA7-213ENST00000555728 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
ITGA7-213ENST00000555728 MROH2BQ7Z745 1585 aa17■□□□□ 0.31
ITGA7-213ENST00000555728 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
ITGA7-213ENST00000555728 ZNF316A6NFI3 1004 aaPredicted RBP16.99■□□□□ 0.31
ITGA7-213ENST00000555728 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
ITGA7-213ENST00000555728 MYT1Q01538 1121 aa16.98■□□□□ 0.31
ITGA7-213ENST00000555728 FAM50AQ14320 339 aaKnown RBP16.94■□□□□ 0.3
ITGA7-213ENST00000555728 BAZ1BQ9UIG0 1483 aaKnown RBP16.94■□□□□ 0.3
ITGA7-213ENST00000555728 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
ITGA7-213ENST00000555728 BCANQ96GW7 911 aa16.91■□□□□ 0.3
ITGA7-213ENST00000555728 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
ITGA7-213ENST00000555728 P3H3Q8IVL6 736 aa16.77■□□□□ 0.27
ITGA7-213ENST00000555728 WIZO95785 1651 aa16.76■□□□□ 0.27
ITGA7-213ENST00000555728 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
ITGA7-213ENST00000555728 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
ITGA7-213ENST00000555728 TRIM52Q96A61 297 aa16.69■□□□□ 0.26
ITGA7-213ENST00000555728 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
ITGA7-213ENST00000555728 FBLN2P98095 1184 aa16.69■□□□□ 0.26
ITGA7-213ENST00000555728 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
ITGA7-213ENST00000555728 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
ITGA7-213ENST00000555728 MIER1Q8N108 512 aa16.64■□□□□ 0.25
ITGA7-213ENST00000555728 ANP32CO43423 234 aa16.61■□□□□ 0.25
ITGA7-213ENST00000555728 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
ITGA7-213ENST00000555728 ARID3CA6NKF2 412 aa16.59■□□□□ 0.25
ITGA7-213ENST00000555728 ZNF326Q5BKZ1 582 aaKnown RBP16.56■□□□□ 0.24
ITGA7-213ENST00000555728 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
ITGA7-213ENST00000555728 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
ITGA7-213ENST00000555728 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
ITGA7-213ENST00000555728 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
ITGA7-213ENST00000555728 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
ITGA7-213ENST00000555728 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
ITGA7-213ENST00000555728 HIRIP3Q9BW71 556 aaPredicted RBP16.48■□□□□ 0.23
ITGA7-213ENST00000555728 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
ITGA7-213ENST00000555728 FKBP8Q14318 412 aa16.47■□□□□ 0.23
ITGA7-213ENST00000555728 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
ITGA7-213ENST00000555728 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
ITGA7-213ENST00000555728 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
ITGA7-213ENST00000555728 CLIP1P30622 1438 aa16.42■□□□□ 0.22
ITGA7-213ENST00000555728 DAXXQ9UER7 740 aaPredicted RBP16.42■□□□□ 0.22
ITGA7-213ENST00000555728 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
ITGA7-213ENST00000555728 CC2D2AQ9P2K1 1620 aa16.39■□□□□ 0.21
ITGA7-213ENST00000555728 CDK11AQ9UQ88 783 aaPredicted RBP16.39■□□□□ 0.21
ITGA7-213ENST00000555728 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
ITGA7-213ENST00000555728 HNRNPUQ00839 825 aaKnown RBP eCLIP16.34■□□□□ 0.21
ITGA7-213ENST00000555728 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
ITGA7-213ENST00000555728 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
ITGA7-213ENST00000555728 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
ITGA7-213ENST00000555728 TONSLQ96HA7 1378 aa16.31■□□□□ 0.2
ITGA7-213ENST00000555728 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
ITGA7-213ENST00000555728 ZNF777Q9ULD5 760 aaPredicted RBP16.28■□□□□ 0.2
ITGA7-213ENST00000555728 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
ITGA7-213ENST00000555728 SOGA1O94964 1423 aa16.27■□□□□ 0.2
ITGA7-213ENST00000555728 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.19
ITGA7-213ENST00000555728 CLSPNQ9HAW4 1339 aa16.26■□□□□ 0.19
ITGA7-213ENST00000555728 IRX6P78412 446 aaPredicted RBP16.25■□□□□ 0.19
ITGA7-213ENST00000555728 GOLGA3Q08378 1498 aa16.25■□□□□ 0.19
ITGA7-213ENST00000555728 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
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