RNA–Protein interactions for RNA: ENST00000316851.11

NCAM1-201, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-201ENST00000316851 DCAF8L2P0C7V8 631 aa17.66■□□□□ 0.42
NCAM1-201ENST00000316851 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
NCAM1-201ENST00000316851 SUPT5HO00267 1087 aaKnown RBP16.92■□□□□ 0.3
NCAM1-201ENST00000316851 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
NCAM1-201ENST00000316851 APLP2Q06481 763 aa16.55■□□□□ 0.24
NCAM1-201ENST00000316851 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
NCAM1-201ENST00000316851 FAM9AQ8IZU1 332 aaPredicted RBP16.36■□□□□ 0.21
NCAM1-201ENST00000316851 CCER1Q8TC90 406 aaPredicted RBP16.34■□□□□ 0.21
NCAM1-201ENST00000316851 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
NCAM1-201ENST00000316851 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
NCAM1-201ENST00000316851 ERICH6Q7L0X2 663 aa16.27■□□□□ 0.19
NCAM1-201ENST00000316851 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
NCAM1-201ENST00000316851 MYT1Q01538 1121 aa16.18■□□□□ 0.18
NCAM1-201ENST00000316851 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
NCAM1-201ENST00000316851 NEFLP07196 543 aa15.92■□□□□ 0.14
NCAM1-201ENST00000316851 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.13
NCAM1-201ENST00000316851 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
NCAM1-201ENST00000316851 ATP1B4Q9UN42 357 aaPredicted RBP15.65■□□□□ 0.1
NCAM1-201ENST00000316851 UBTFP17480 764 aaKnown RBP15.64■□□□□ 0.09
NCAM1-201ENST00000316851 RANGAP1P46060 587 aaPredicted RBP15.62■□□□□ 0.09
NCAM1-201ENST00000316851 YTHDC1Q96MU7 727 aaKnown RBP15.55■□□□□ 0.08
NCAM1-201ENST00000316851 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
NCAM1-201ENST00000316851 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
NCAM1-201ENST00000316851 HRCP23327 699 aa15.32■□□□□ 0.04
NCAM1-201ENST00000316851 RTL5Q5HYW3 569 aaPredicted RBP15.2■□□□□ 0.02
NCAM1-201ENST00000316851 ZNF316A6NFI3 1004 aaPredicted RBP15.14■□□□□ 0.01
NCAM1-201ENST00000316851 POLR3GLQ9BT43 218 aa15.14■□□□□ 0.01
NCAM1-201ENST00000316851 PPARGC1BQ86YN6 1023 aaKnown RBP15.14■□□□□ 0.01
NCAM1-201ENST00000316851 MYT1LQ9UL68 1186 aa15.12■□□□□ 0.01
NCAM1-201ENST00000316851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.09■□□□□ 0.01
NCAM1-201ENST00000316851 HNRNPUL2Q1KMD3 747 aaKnown RBP15.09■□□□□ 0.01
NCAM1-201ENST00000316851 ITGAEP38570 1179 aa15.09■□□□□ 0.01
NCAM1-201ENST00000316851 CLSPNQ9HAW4 1339 aa15.02■□□□□ -0
NCAM1-201ENST00000316851 DIEXFQ68CQ4 756 aaKnown RBP14.99□□□□□ -0.01
NCAM1-201ENST00000316851 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
NCAM1-201ENST00000316851 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
NCAM1-201ENST00000316851 LOC105371045A0A1W2PR82 267 aa14.87□□□□□ -0.03
NCAM1-201ENST00000316851 CDK11AQ9UQ88 783 aaPredicted RBP14.84□□□□□ -0.03
NCAM1-201ENST00000316851 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.04
NCAM1-201ENST00000316851 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
NCAM1-201ENST00000316851 ANP32CO43423 234 aa14.81□□□□□ -0.04
NCAM1-201ENST00000316851 FAM50AQ14320 339 aaKnown RBP14.79□□□□□ -0.04
NCAM1-201ENST00000316851 TRIM52Q96A61 297 aa14.77□□□□□ -0.05
NCAM1-201ENST00000316851 GTF3C3Q9Y5Q9 886 aa14.69□□□□□ -0.06
NCAM1-201ENST00000316851 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
NCAM1-201ENST00000316851 ANP32AP39687 249 aaKnown RBP14.64□□□□□ -0.07
NCAM1-201ENST00000316851 CANXP27824 592 aaKnown RBP14.63□□□□□ -0.07
NCAM1-201ENST00000316851 NEFMP07197 916 aa14.63□□□□□ -0.07
NCAM1-201ENST00000316851 BCANQ96GW7 911 aa14.62□□□□□ -0.07
NCAM1-201ENST00000316851 ANP32BQ92688 251 aaKnown RBP14.53□□□□□ -0.08
NCAM1-201ENST00000316851 ZNF326Q5BKZ1 582 aaKnown RBP14.53□□□□□ -0.08
NCAM1-201ENST00000316851 ACIN1Q9UKV3 1341 aaKnown RBP14.52□□□□□ -0.08
NCAM1-201ENST00000316851 GLIPR1L2Q4G1C9 344 aa14.43□□□□□ -0.1
NCAM1-201ENST00000316851 UPF2Q9HAU5 1272 aaKnown RBP14.42□□□□□ -0.1
NCAM1-201ENST00000316851 SLC24A1O60721 1099 aa14.38□□□□□ -0.11
NCAM1-201ENST00000316851 HSP90AA1P07900 732 aaKnown RBP14.35□□□□□ -0.11
NCAM1-201ENST00000316851 NPM2Q86SE8 214 aaKnown RBP14.34□□□□□ -0.11
NCAM1-201ENST00000316851 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
NCAM1-201ENST00000316851 TONSLQ96HA7 1378 aa14.32□□□□□ -0.12
NCAM1-201ENST00000316851 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.3□□□□□ -0.12
NCAM1-201ENST00000316851 FKBP8Q14318 412 aa14.29□□□□□ -0.12
NCAM1-201ENST00000316851 EIF5BO60841 1220 aaKnown RBP14.27□□□□□ -0.12
NCAM1-201ENST00000316851 BCL11AQ9H165 835 aa14.26□□□□□ -0.13
NCAM1-201ENST00000316851 FBLN2P98095 1184 aa14.25□□□□□ -0.13
NCAM1-201ENST00000316851 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
NCAM1-201ENST00000316851 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
NCAM1-201ENST00000316851 ABCC9O60706 1549 aa14.22□□□□□ -0.13
NCAM1-201ENST00000316851 HNRNPUQ00839 825 aaKnown RBP eCLIP14.22□□□□□ -0.13
NCAM1-201ENST00000316851 ZNF777Q9ULD5 760 aaPredicted RBP14.19□□□□□ -0.14
NCAM1-201ENST00000316851 CCDC136Q96JN2 1154 aa14.18□□□□□ -0.14
NCAM1-201ENST00000316851 ESF1Q9H501 851 aaKnown RBP14.18□□□□□ -0.14
NCAM1-201ENST00000316851 P3H3Q8IVL6 736 aa14.15□□□□□ -0.14
NCAM1-201ENST00000316851 ANP32EQ9BTT0 268 aa14.15□□□□□ -0.14
NCAM1-201ENST00000316851 TMC1Q8TDI8 760 aa14.13□□□□□ -0.15
NCAM1-201ENST00000316851 WDR43Q15061 677 aaKnown RBP eCLIP14.13□□□□□ -0.15
NCAM1-201ENST00000316851 FAM9BQ8IZU0 186 aa14.13□□□□□ -0.15
NCAM1-201ENST00000316851 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
NCAM1-201ENST00000316851 STAG3Q9UJ98 1225 aa14.11□□□□□ -0.15
NCAM1-201ENST00000316851 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
NCAM1-201ENST00000316851 MYH16Q9H6N6 1097 aa14.09□□□□□ -0.15
NCAM1-201ENST00000316851 BECN1Q14457 450 aa14.08□□□□□ -0.16
NCAM1-201ENST00000316851 ARID3CA6NKF2 412 aa14.05□□□□□ -0.16
NCAM1-201ENST00000316851 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
NCAM1-201ENST00000316851 CDK11BP21127 795 aaKnown RBP14.04□□□□□ -0.16
NCAM1-201ENST00000316851 MRS2Q9HD23 443 aa14.04□□□□□ -0.16
NCAM1-201ENST00000316851 NCLP19338 710 aaKnown RBP14.03□□□□□ -0.16
NCAM1-201ENST00000316851 NBR1Q14596 966 aa14.03□□□□□ -0.16
NCAM1-201ENST00000316851 GOLGA6L22H0YM25 854 aa14.02□□□□□ -0.17
NCAM1-201ENST00000316851 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
NCAM1-201ENST00000316851 TRIM44Q96DX7 344 aaPredicted RBP13.99□□□□□ -0.17
NCAM1-201ENST00000316851 TSPY4P0CV99 314 aa13.97□□□□□ -0.17
NCAM1-201ENST00000316851 TSPY10P0CW01 314 aa13.97□□□□□ -0.17
NCAM1-201ENST00000316851 TNNT2P45379 298 aaPredicted RBP13.95□□□□□ -0.18
NCAM1-201ENST00000316851 EIF4G2P78344 907 aaKnown RBP eCLIP13.95□□□□□ -0.18
NCAM1-201ENST00000316851 SALL2Q9Y467 1007 aaPredicted RBP13.95□□□□□ -0.18
NCAM1-201ENST00000316851 MTUS2Q5JR59 1369 aa13.93□□□□□ -0.18
NCAM1-201ENST00000316851 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
NCAM1-201ENST00000316851 CASC1Q6TDU7 716 aa13.9□□□□□ -0.18
NCAM1-201ENST00000316851 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
NCAM1-201ENST00000316851 SCRIBQ14160 1630 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms