RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 DCAF8L2P0C7V8 631 aa17.42■□□□□ 0.38
TRERF1-205ENST00000541110 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.18
TRERF1-205ENST00000541110 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
TRERF1-205ENST00000541110 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
TRERF1-205ENST00000541110 FAM9AQ8IZU1 332 aaPredicted RBP15.92■□□□□ 0.14
TRERF1-205ENST00000541110 APLP2Q06481 763 aa15.82■□□□□ 0.12
TRERF1-205ENST00000541110 ERICH6Q7L0X2 663 aa15.67■□□□□ 0.1
TRERF1-205ENST00000541110 TTBK1Q5TCY1 1321 aaPredicted RBP15.61■□□□□ 0.09
TRERF1-205ENST00000541110 SHROOM4Q9ULL8 1493 aa15.61■□□□□ 0.09
TRERF1-205ENST00000541110 ATP1B4Q9UN42 357 aaPredicted RBP15.53■□□□□ 0.08
TRERF1-205ENST00000541110 RANGAP1P46060 587 aaPredicted RBP15.49■□□□□ 0.07
TRERF1-205ENST00000541110 CCER1Q8TC90 406 aaPredicted RBP15.44■□□□□ 0.06
TRERF1-205ENST00000541110 MYT1LQ9UL68 1186 aa15.24■□□□□ 0.03
TRERF1-205ENST00000541110 PCGF6Q9BYE7 350 aa15.17■□□□□ 0.02
TRERF1-205ENST00000541110 MYT1Q01538 1121 aa15.13■□□□□ 0.01
TRERF1-205ENST00000541110 CHIC1Q5VXU3 224 aa15.12■□□□□ 0.01
TRERF1-205ENST00000541110 NEFLP07196 543 aa15.05■□□□□ 0
TRERF1-205ENST00000541110 DAXXQ9UER7 740 aaPredicted RBP15.01□□□□□ -0.01
TRERF1-205ENST00000541110 CENPBP07199 599 aaPredicted RBP15□□□□□ -0.01
TRERF1-205ENST00000541110 POLR3GLQ9BT43 218 aa14.96□□□□□ -0.01
TRERF1-205ENST00000541110 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
TRERF1-205ENST00000541110 YTHDC1Q96MU7 727 aaKnown RBP14.91□□□□□ -0.02
TRERF1-205ENST00000541110 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
TRERF1-205ENST00000541110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.87□□□□□ -0.03
TRERF1-205ENST00000541110 HNRNPUL2Q1KMD3 747 aaKnown RBP14.87□□□□□ -0.03
TRERF1-205ENST00000541110 CNGB1Q14028 1251 aaPredicted RBP14.84□□□□□ -0.03
TRERF1-205ENST00000541110 TRIM41Q8WV44 630 aa14.71□□□□□ -0.05
TRERF1-205ENST00000541110 NISCHQ9Y2I1 1504 aa14.68□□□□□ -0.06
TRERF1-205ENST00000541110 ITGAEP38570 1179 aa14.65□□□□□ -0.06
TRERF1-205ENST00000541110 ZEB1P37275 1124 aaPredicted RBP14.63□□□□□ -0.07
TRERF1-205ENST00000541110 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
TRERF1-205ENST00000541110 CLSPNQ9HAW4 1339 aa14.61□□□□□ -0.07
TRERF1-205ENST00000541110 PPARGC1BQ86YN6 1023 aaKnown RBP14.6□□□□□ -0.07
TRERF1-205ENST00000541110 ZNF316A6NFI3 1004 aaPredicted RBP14.59□□□□□ -0.07
TRERF1-205ENST00000541110 BCL11AQ9H165 835 aa14.48□□□□□ -0.09
TRERF1-205ENST00000541110 BCANQ96GW7 911 aa14.42□□□□□ -0.1
TRERF1-205ENST00000541110 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
TRERF1-205ENST00000541110 RTL5Q5HYW3 569 aaPredicted RBP14.33□□□□□ -0.12
TRERF1-205ENST00000541110 PLPPR3Q6T4P5 718 aa14.24□□□□□ -0.13
TRERF1-205ENST00000541110 TRIM52Q96A61 297 aa14.18□□□□□ -0.14
TRERF1-205ENST00000541110 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
TRERF1-205ENST00000541110 FAM50AQ14320 339 aaKnown RBP14.14□□□□□ -0.15
TRERF1-205ENST00000541110 NEFMP07197 916 aa14.13□□□□□ -0.15
TRERF1-205ENST00000541110 ZNF326Q5BKZ1 582 aaKnown RBP14.12□□□□□ -0.15
TRERF1-205ENST00000541110 FBLN2P98095 1184 aa14.1□□□□□ -0.15
TRERF1-205ENST00000541110 NEUROD1Q13562 356 aa14.03□□□□□ -0.16
TRERF1-205ENST00000541110 ESF1Q9H501 851 aaKnown RBP14.03□□□□□ -0.16
TRERF1-205ENST00000541110 A0A0G2JS52 829 aa14.02□□□□□ -0.17
TRERF1-205ENST00000541110 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
TRERF1-205ENST00000541110 TRIM26Q12899 539 aaPredicted RBP13.98□□□□□ -0.17
TRERF1-205ENST00000541110 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
TRERF1-205ENST00000541110 CDK11BP21127 795 aaKnown RBP13.89□□□□□ -0.19
TRERF1-205ENST00000541110 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
TRERF1-205ENST00000541110 HSP90AA1P07900 732 aaKnown RBP13.86□□□□□ -0.19
TRERF1-205ENST00000541110 HRCP23327 699 aa13.84□□□□□ -0.19
TRERF1-205ENST00000541110 ANP32BQ92688 251 aaKnown RBP13.83□□□□□ -0.2
TRERF1-205ENST00000541110 ARID3CA6NKF2 412 aa13.83□□□□□ -0.2
TRERF1-205ENST00000541110 ANP32CO43423 234 aa13.82□□□□□ -0.2
TRERF1-205ENST00000541110 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
TRERF1-205ENST00000541110 CHGAP10645 457 aaKnown RBP13.82□□□□□ -0.2
TRERF1-205ENST00000541110 TULP1O00294 542 aaPredicted RBP13.81□□□□□ -0.2
TRERF1-205ENST00000541110 NPM2Q86SE8 214 aaKnown RBP13.78□□□□□ -0.2
TRERF1-205ENST00000541110 DIEXFQ68CQ4 756 aaKnown RBP13.76□□□□□ -0.21
TRERF1-205ENST00000541110 ZBTB7CA1YPR0 619 aa13.75□□□□□ -0.21
TRERF1-205ENST00000541110 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
TRERF1-205ENST00000541110 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
TRERF1-205ENST00000541110 ANP32AP39687 249 aaKnown RBP13.68□□□□□ -0.22
TRERF1-205ENST00000541110 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
TRERF1-205ENST00000541110 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRERF1-205ENST00000541110 C14orf37Q86TY3 774 aa13.65□□□□□ -0.22
TRERF1-205ENST00000541110 EIF5BO60841 1220 aaKnown RBP13.64□□□□□ -0.23
TRERF1-205ENST00000541110 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRERF1-205ENST00000541110 UPF2Q9HAU5 1272 aaKnown RBP13.63□□□□□ -0.23
TRERF1-205ENST00000541110 P3H3Q8IVL6 736 aa13.62□□□□□ -0.23
TRERF1-205ENST00000541110 ARXQ96QS3 562 aa13.62□□□□□ -0.23
TRERF1-205ENST00000541110 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
TRERF1-205ENST00000541110 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
TRERF1-205ENST00000541110 SALL2Q9Y467 1007 aaPredicted RBP13.56□□□□□ -0.24
TRERF1-205ENST00000541110 NPHP1O15259 732 aa13.56□□□□□ -0.24
TRERF1-205ENST00000541110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRERF1-205ENST00000541110 MYH16Q9H6N6 1097 aa13.47□□□□□ -0.25
TRERF1-205ENST00000541110 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.25
TRERF1-205ENST00000541110 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
TRERF1-205ENST00000541110 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
TRERF1-205ENST00000541110 ABCC9O60706 1549 aa13.41□□□□□ -0.26
TRERF1-205ENST00000541110 CLSTN1O94985 981 aa13.41□□□□□ -0.26
TRERF1-205ENST00000541110 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.26
TRERF1-205ENST00000541110 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.4□□□□□ -0.26
TRERF1-205ENST00000541110 WDR43Q15061 677 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRERF1-205ENST00000541110 GLIPR1L2Q4G1C9 344 aa13.4□□□□□ -0.27
TRERF1-205ENST00000541110 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
TRERF1-205ENST00000541110 FAM9BQ8IZU0 186 aa13.38□□□□□ -0.27
TRERF1-205ENST00000541110 ZRSR1Q15695 479 aaKnown RBP13.37□□□□□ -0.27
TRERF1-205ENST00000541110 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
TRERF1-205ENST00000541110 NBR1Q14596 966 aa13.34□□□□□ -0.27
TRERF1-205ENST00000541110 KDM2AQ9Y2K7 1162 aa13.34□□□□□ -0.27
TRERF1-205ENST00000541110 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
TRERF1-205ENST00000541110 TMC1Q8TDI8 760 aa13.31□□□□□ -0.28
TRERF1-205ENST00000541110 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
TRERF1-205ENST00000541110 PRM3Q9NNZ6 103 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms