RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.24
USP6-205ENST00000574788 PELP1Q8IZL8 1130 aaKnown RBP16.52■□□□□ 0.24
USP6-205ENST00000574788 FAM9AQ8IZU1 332 aaPredicted RBP15.79■□□□□ 0.12
USP6-205ENST00000574788 CCER1Q8TC90 406 aaPredicted RBP15.73■□□□□ 0.11
USP6-205ENST00000574788 APLP2Q06481 763 aa15.69■□□□□ 0.1
USP6-205ENST00000574788 ERICH6Q7L0X2 663 aa15.58■□□□□ 0.08
USP6-205ENST00000574788 SUPT5HO00267 1087 aaKnown RBP15.56■□□□□ 0.08
USP6-205ENST00000574788 MYT1Q01538 1121 aa15.39■□□□□ 0.05
USP6-205ENST00000574788 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.04
USP6-205ENST00000574788 NEFLP07196 543 aa15.16■□□□□ 0.02
USP6-205ENST00000574788 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
USP6-205ENST00000574788 ZEB1P37275 1124 aaPredicted RBP15.13■□□□□ 0.01
USP6-205ENST00000574788 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
USP6-205ENST00000574788 DAXXQ9UER7 740 aaPredicted RBP14.99□□□□□ -0.01
USP6-205ENST00000574788 SHROOM4Q9ULL8 1493 aa14.99□□□□□ -0.01
USP6-205ENST00000574788 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
USP6-205ENST00000574788 PCGF6Q9BYE7 350 aa14.88□□□□□ -0.03
USP6-205ENST00000574788 ATP1B4Q9UN42 357 aaPredicted RBP14.77□□□□□ -0.05
USP6-205ENST00000574788 TTBK1Q5TCY1 1321 aaPredicted RBP14.72□□□□□ -0.05
USP6-205ENST00000574788 UBTFP17480 764 aaKnown RBP14.59□□□□□ -0.07
USP6-205ENST00000574788 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
USP6-205ENST00000574788 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
USP6-205ENST00000574788 ZNF316A6NFI3 1004 aaPredicted RBP14.52□□□□□ -0.09
USP6-205ENST00000574788 RTL5Q5HYW3 569 aaPredicted RBP14.5□□□□□ -0.09
USP6-205ENST00000574788 MYT1LQ9UL68 1186 aa14.45□□□□□ -0.1
USP6-205ENST00000574788 CLSPNQ9HAW4 1339 aa14.4□□□□□ -0.1
USP6-205ENST00000574788 POLR3GLQ9BT43 218 aa14.3□□□□□ -0.12
USP6-205ENST00000574788 ZBTB47Q9UFB7 747 aaPredicted RBP14.27□□□□□ -0.12
USP6-205ENST00000574788 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
USP6-205ENST00000574788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
USP6-205ENST00000574788 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
USP6-205ENST00000574788 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
USP6-205ENST00000574788 ITGAEP38570 1179 aa14.06□□□□□ -0.16
USP6-205ENST00000574788 NEFMP07197 916 aa14.04□□□□□ -0.16
USP6-205ENST00000574788 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
USP6-205ENST00000574788 ANP32BQ92688 251 aaKnown RBP14.02□□□□□ -0.17
USP6-205ENST00000574788 HRCP23327 699 aa14.01□□□□□ -0.17
USP6-205ENST00000574788 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.17
USP6-205ENST00000574788 CNGB1Q14028 1251 aaPredicted RBP13.96□□□□□ -0.18
USP6-205ENST00000574788 CANXP27824 592 aaKnown RBP13.92□□□□□ -0.18
USP6-205ENST00000574788 GLIPR1L2Q4G1C9 344 aa13.92□□□□□ -0.18
USP6-205ENST00000574788 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
USP6-205ENST00000574788 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
USP6-205ENST00000574788 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
USP6-205ENST00000574788 ANP32AP39687 249 aaKnown RBP13.85□□□□□ -0.19
USP6-205ENST00000574788 ANP32CO43423 234 aa13.84□□□□□ -0.19
USP6-205ENST00000574788 HSP90AA1P07900 732 aaKnown RBP13.79□□□□□ -0.2
USP6-205ENST00000574788 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
USP6-205ENST00000574788 UPF2Q9HAU5 1272 aaKnown RBP13.78□□□□□ -0.2
USP6-205ENST00000574788 FAM50AQ14320 339 aaKnown RBP13.76□□□□□ -0.21
USP6-205ENST00000574788 CDK11BP21127 795 aaKnown RBP13.75□□□□□ -0.21
USP6-205ENST00000574788 BCANQ96GW7 911 aa13.69□□□□□ -0.22
USP6-205ENST00000574788 BCL11AQ9H165 835 aa13.63□□□□□ -0.23
USP6-205ENST00000574788 ZNF326Q5BKZ1 582 aaKnown RBP13.62□□□□□ -0.23
USP6-205ENST00000574788 EIF5BO60841 1220 aaKnown RBP13.62□□□□□ -0.23
USP6-205ENST00000574788 NEUROD1Q13562 356 aa13.61□□□□□ -0.23
USP6-205ENST00000574788 ESF1Q9H501 851 aaKnown RBP13.59□□□□□ -0.23
USP6-205ENST00000574788 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.52□□□□□ -0.25
USP6-205ENST00000574788 ANP32EQ9BTT0 268 aa13.49□□□□□ -0.25
USP6-205ENST00000574788 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
USP6-205ENST00000574788 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
USP6-205ENST00000574788 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
USP6-205ENST00000574788 MYH16Q9H6N6 1097 aa13.44□□□□□ -0.26
USP6-205ENST00000574788 LOC105371045A0A1W2PR82 267 aa13.43□□□□□ -0.26
USP6-205ENST00000574788 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
USP6-205ENST00000574788 NCLP19338 710 aaKnown RBP13.38□□□□□ -0.27
USP6-205ENST00000574788 ZRSR1Q15695 479 aaKnown RBP13.38□□□□□ -0.27
USP6-205ENST00000574788 FBLN2P98095 1184 aa13.37□□□□□ -0.27
USP6-205ENST00000574788 GOLGA6L22H0YM25 854 aa13.36□□□□□ -0.27
USP6-205ENST00000574788 TRIM44Q96DX7 344 aaPredicted RBP13.35□□□□□ -0.27
USP6-205ENST00000574788 BECN1Q14457 450 aa13.34□□□□□ -0.27
USP6-205ENST00000574788 TONSLQ96HA7 1378 aa13.32□□□□□ -0.28
USP6-205ENST00000574788 CCDC136Q96JN2 1154 aa13.29□□□□□ -0.28
USP6-205ENST00000574788 WDR43Q15061 677 aaKnown RBP eCLIP13.28□□□□□ -0.28
USP6-205ENST00000574788 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
USP6-205ENST00000574788 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
USP6-205ENST00000574788 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
USP6-205ENST00000574788 CASC1Q6TDU7 716 aa13.25□□□□□ -0.29
USP6-205ENST00000574788 NRDCO43847 1150 aa13.23□□□□□ -0.29
USP6-205ENST00000574788 GOLGA6L6A8MZA4 724 aa13.23□□□□□ -0.29
USP6-205ENST00000574788 ACIN1Q9UKV3 1341 aaKnown RBP13.23□□□□□ -0.29
USP6-205ENST00000574788 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP6-205ENST00000574788 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
USP6-205ENST00000574788 FKBP8Q14318 412 aa13.2□□□□□ -0.3
USP6-205ENST00000574788 CHGAP10645 457 aaKnown RBP13.2□□□□□ -0.3
USP6-205ENST00000574788 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
USP6-205ENST00000574788 PTMAP06454 111 aaKnown RBP13.18□□□□□ -0.3
USP6-205ENST00000574788 DNTTIP2Q5QJE6 756 aaKnown RBP13.16□□□□□ -0.3
USP6-205ENST00000574788 ARXQ96QS3 562 aa13.15□□□□□ -0.3
USP6-205ENST00000574788 NBR1Q14596 966 aa13.15□□□□□ -0.3
USP6-205ENST00000574788 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
USP6-205ENST00000574788 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
USP6-205ENST00000574788 FAM9BQ8IZU0 186 aa13.13□□□□□ -0.31
USP6-205ENST00000574788 A0A0G2JS52 829 aa13.12□□□□□ -0.31
USP6-205ENST00000574788 CHMP4BQ9H444 224 aaKnown RBP13.12□□□□□ -0.31
USP6-205ENST00000574788 CHAF1AQ13111 956 aaPredicted RBP13.09□□□□□ -0.31
USP6-205ENST00000574788 CDCA8Q53HL2 280 aa13.05□□□□□ -0.32
USP6-205ENST00000574788 TSPY4P0CV99 314 aa13.05□□□□□ -0.32
USP6-205ENST00000574788 TSPY10P0CW01 314 aa13.05□□□□□ -0.32
USP6-205ENST00000574788 CFAP53Q96M91 514 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms