RNA–Protein interactions for RNA: ENST00000399609.7

SRL-201, Transcript of sarcalumenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRL, Length 4,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRL-201ENST00000399609 DCAF8L2P0C7V8 631 aa16.68■□□□□ 0.26
SRL-201ENST00000399609 NISCHQ9Y2I1 1504 aa16.15■□□□□ 0.18
SRL-201ENST00000399609 ABCC9O60706 1549 aa15.08■□□□□ 0
SRL-201ENST00000399609 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
SRL-201ENST00000399609 SHROOM4Q9ULL8 1493 aa14.72□□□□□ -0.05
SRL-201ENST00000399609 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
SRL-201ENST00000399609 FAM9AQ8IZU1 332 aaPredicted RBP14.32□□□□□ -0.12
SRL-201ENST00000399609 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
SRL-201ENST00000399609 FBLN2P98095 1184 aa13.94□□□□□ -0.18
SRL-201ENST00000399609 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
SRL-201ENST00000399609 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
SRL-201ENST00000399609 ATP1B4Q9UN42 357 aaPredicted RBP13.8□□□□□ -0.2
SRL-201ENST00000399609 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
SRL-201ENST00000399609 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
SRL-201ENST00000399609 MYT1Q01538 1121 aa13.76□□□□□ -0.21
SRL-201ENST00000399609 MYT1LQ9UL68 1186 aa13.73□□□□□ -0.21
SRL-201ENST00000399609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
SRL-201ENST00000399609 HNRNPUL2Q1KMD3 747 aaKnown RBP13.7□□□□□ -0.22
SRL-201ENST00000399609 SCRIBQ14160 1630 aa13.68□□□□□ -0.22
SRL-201ENST00000399609 APLP2Q06481 763 aa13.61□□□□□ -0.23
SRL-201ENST00000399609 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
SRL-201ENST00000399609 ERCC6Q03468 1493 aa13.6□□□□□ -0.23
SRL-201ENST00000399609 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
SRL-201ENST00000399609 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
SRL-201ENST00000399609 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
SRL-201ENST00000399609 NACADO15069 1562 aa13.49□□□□□ -0.25
SRL-201ENST00000399609 UBTFP17480 764 aaKnown RBP13.45□□□□□ -0.26
SRL-201ENST00000399609 CECR2Q9BXF3 1484 aa13.37□□□□□ -0.27
SRL-201ENST00000399609 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
SRL-201ENST00000399609 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
SRL-201ENST00000399609 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
SRL-201ENST00000399609 AEBP2Q6ZN18 517 aaPredicted RBP13.31□□□□□ -0.28
SRL-201ENST00000399609 PLPPR3Q6T4P5 718 aa13.29□□□□□ -0.28
SRL-201ENST00000399609 ESF1Q9H501 851 aaKnown RBP13.18□□□□□ -0.3
SRL-201ENST00000399609 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
SRL-201ENST00000399609 ARID3CA6NKF2 412 aa13.14□□□□□ -0.31
SRL-201ENST00000399609 BAZ1BQ9UIG0 1483 aaKnown RBP13.12□□□□□ -0.31
SRL-201ENST00000399609 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
SRL-201ENST00000399609 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
SRL-201ENST00000399609 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
SRL-201ENST00000399609 P3H3Q8IVL6 736 aa12.99□□□□□ -0.33
SRL-201ENST00000399609 ARID4BQ4LE39 1312 aaPredicted RBP12.98□□□□□ -0.33
SRL-201ENST00000399609 BCANQ96GW7 911 aa12.95□□□□□ -0.34
SRL-201ENST00000399609 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
SRL-201ENST00000399609 KCNH8Q96L42 1107 aa12.92□□□□□ -0.34
SRL-201ENST00000399609 CDK11AQ9UQ88 783 aaPredicted RBP12.88□□□□□ -0.35
SRL-201ENST00000399609 ZNF777Q9ULD5 760 aaPredicted RBP12.84□□□□□ -0.35
SRL-201ENST00000399609 ERICH6Q7L0X2 663 aa12.84□□□□□ -0.35
SRL-201ENST00000399609 ITGAEP38570 1179 aa12.82□□□□□ -0.36
SRL-201ENST00000399609 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
SRL-201ENST00000399609 SMARCA2P51531 1590 aa12.77□□□□□ -0.36
SRL-201ENST00000399609 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.36
SRL-201ENST00000399609 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
SRL-201ENST00000399609 DCAF1Q9Y4B6 1507 aa12.74□□□□□ -0.37
SRL-201ENST00000399609 MYO15BQ96JP2 1530 aa12.71□□□□□ -0.37
SRL-201ENST00000399609 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.37
SRL-201ENST00000399609 TDRD9Q8NDG6 1382 aaKnown RBP12.7□□□□□ -0.38
SRL-201ENST00000399609 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
SRL-201ENST00000399609 PRKCSHP14314 528 aaPredicted RBP12.68□□□□□ -0.38
SRL-201ENST00000399609 CC2D2AQ9P2K1 1620 aa12.68□□□□□ -0.38
SRL-201ENST00000399609 MLECQ14165 292 aa12.67□□□□□ -0.38
SRL-201ENST00000399609 CEP164Q9UPV0 1460 aa12.67□□□□□ -0.38
SRL-201ENST00000399609 PLEKHD1A6NEE1 506 aa12.66□□□□□ -0.38
SRL-201ENST00000399609 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
SRL-201ENST00000399609 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
SRL-201ENST00000399609 FAM50AQ14320 339 aaKnown RBP12.62□□□□□ -0.39
SRL-201ENST00000399609 CHGAP10645 457 aaKnown RBP12.61□□□□□ -0.39
SRL-201ENST00000399609 PPARGC1BQ86YN6 1023 aaKnown RBP12.6□□□□□ -0.39
SRL-201ENST00000399609 SENP3Q9H4L4 574 aaPredicted RBP12.6□□□□□ -0.39
SRL-201ENST00000399609 SOGA1O94964 1423 aa12.6□□□□□ -0.39
SRL-201ENST00000399609 RSF1Q96T23 1441 aaPredicted RBP12.6□□□□□ -0.39
SRL-201ENST00000399609 FAM69CQ0P6D2 419 aa12.59□□□□□ -0.39
SRL-201ENST00000399609 C14orf37Q86TY3 774 aa12.57□□□□□ -0.4
SRL-201ENST00000399609 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
SRL-201ENST00000399609 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
SRL-201ENST00000399609 DNAJC5Q9H3Z4 198 aa12.54□□□□□ -0.4
SRL-201ENST00000399609 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
SRL-201ENST00000399609 TRIM52Q96A61 297 aa12.53□□□□□ -0.4
SRL-201ENST00000399609 JPH4Q96JJ6 628 aa12.52□□□□□ -0.41
SRL-201ENST00000399609 NCAPD3P42695 1498 aa12.52□□□□□ -0.41
SRL-201ENST00000399609 TSPY4P0CV99 314 aa12.5□□□□□ -0.41
SRL-201ENST00000399609 TSPY10P0CW01 314 aa12.5□□□□□ -0.41
SRL-201ENST00000399609 NESP48681 1621 aa12.49□□□□□ -0.41
SRL-201ENST00000399609 CARMIL2Q6F5E8 1435 aa12.48□□□□□ -0.41
SRL-201ENST00000399609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
SRL-201ENST00000399609 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
SRL-201ENST00000399609 CUX2O14529 1486 aa12.47□□□□□ -0.41
SRL-201ENST00000399609 KIF27Q86VH2 1401 aa12.46□□□□□ -0.41
SRL-201ENST00000399609 PPP1R15AO75807 674 aaPredicted RBP12.45□□□□□ -0.42
SRL-201ENST00000399609 POLR3GLQ9BT43 218 aa12.4□□□□□ -0.42
SRL-201ENST00000399609 MRC2Q9UBG0 1479 aa12.39□□□□□ -0.43
SRL-201ENST00000399609 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
SRL-201ENST00000399609 ABCC8Q09428 1581 aa12.38□□□□□ -0.43
SRL-201ENST00000399609 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
SRL-201ENST00000399609 HAP1P54257 671 aaPredicted RBP12.37□□□□□ -0.43
SRL-201ENST00000399609 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
SRL-201ENST00000399609 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.43
SRL-201ENST00000399609 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
SRL-201ENST00000399609 CCDC88BA6NC98 1476 aa12.33□□□□□ -0.44
SRL-201ENST00000399609 PCGF6Q9BYE7 350 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms