RNA–Protein interactions for RNA: ENST00000529270.1

C11orf1-203, Transcript of chromosome 11 open reading frame 1, humanhuman

TSL 2 BASIC

Gene C11orf1, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf1-203ENST00000529270 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
C11orf1-203ENST00000529270 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
C11orf1-203ENST00000529270 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
C11orf1-203ENST00000529270 PLPPR3Q6T4P5 718 aa17.89■□□□□ 0.46
C11orf1-203ENST00000529270 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
C11orf1-203ENST00000529270 NISCHQ9Y2I1 1504 aa17.35■□□□□ 0.37
C11orf1-203ENST00000529270 ADRA2BP18089 450 aa16.73■□□□□ 0.27
C11orf1-203ENST00000529270 EHMT2Q96KQ7 1210 aa16.73■□□□□ 0.27
C11orf1-203ENST00000529270 KCNA4P22459 653 aa16.63■□□□□ 0.25
C11orf1-203ENST00000529270 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
C11orf1-203ENST00000529270 FOXD1Q16676 465 aa16.31■□□□□ 0.2
C11orf1-203ENST00000529270 ABCC9O60706 1549 aa16.25■□□□□ 0.19
C11orf1-203ENST00000529270 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.16
C11orf1-203ENST00000529270 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
C11orf1-203ENST00000529270 CCDC180Q9P1Z9 1646 aa15.89■□□□□ 0.13
C11orf1-203ENST00000529270 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
C11orf1-203ENST00000529270 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.11
C11orf1-203ENST00000529270 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
C11orf1-203ENST00000529270 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
C11orf1-203ENST00000529270 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
C11orf1-203ENST00000529270 RB1CC1Q8TDY2 1594 aa15.3■□□□□ 0.04
C11orf1-203ENST00000529270 ZBTB22O15209 634 aa15.3■□□□□ 0.04
C11orf1-203ENST00000529270 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
C11orf1-203ENST00000529270 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
C11orf1-203ENST00000529270 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
C11orf1-203ENST00000529270 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
C11orf1-203ENST00000529270 NACADO15069 1562 aa15.08■□□□□ 0
C11orf1-203ENST00000529270 SLC24A1O60721 1099 aa15.02■□□□□ -0
C11orf1-203ENST00000529270 FOXD4L1Q9NU39 408 aa15.02■□□□□ -0
C11orf1-203ENST00000529270 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
C11orf1-203ENST00000529270 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
C11orf1-203ENST00000529270 RTN4Q9NQC3 1192 aaKnown RBP14.87□□□□□ -0.03
C11orf1-203ENST00000529270 AMER1Q5JTC6 1135 aaPredicted RBP14.86□□□□□ -0.03
C11orf1-203ENST00000529270 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.04
C11orf1-203ENST00000529270 MYO15BQ96JP2 1530 aa14.74□□□□□ -0.05
C11orf1-203ENST00000529270 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
C11orf1-203ENST00000529270 CECR2Q9BXF3 1484 aa14.71□□□□□ -0.05
C11orf1-203ENST00000529270 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
C11orf1-203ENST00000529270 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
C11orf1-203ENST00000529270 RNF216Q9NWF9 866 aaPredicted RBP14.67□□□□□ -0.06
C11orf1-203ENST00000529270 MSH5O43196 834 aa14.66□□□□□ -0.06
C11orf1-203ENST00000529270 SHROOM4Q9ULL8 1493 aa14.66□□□□□ -0.06
C11orf1-203ENST00000529270 EIF4G1Q04637 1599 aaKnown RBP14.57□□□□□ -0.08
C11orf1-203ENST00000529270 FKBP8Q14318 412 aa14.47□□□□□ -0.09
C11orf1-203ENST00000529270 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
C11orf1-203ENST00000529270 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
C11orf1-203ENST00000529270 DCAF1Q9Y4B6 1507 aa14.35□□□□□ -0.11
C11orf1-203ENST00000529270 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
C11orf1-203ENST00000529270 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
C11orf1-203ENST00000529270 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
C11orf1-203ENST00000529270 ZCCHC6Q5VYS8 1495 aaKnown RBP14.28□□□□□ -0.12
C11orf1-203ENST00000529270 DMRT2Q9Y5R5 561 aa14.27□□□□□ -0.12
C11orf1-203ENST00000529270 CUX2O14529 1486 aa14.27□□□□□ -0.13
C11orf1-203ENST00000529270 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
C11orf1-203ENST00000529270 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
C11orf1-203ENST00000529270 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
C11orf1-203ENST00000529270 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
C11orf1-203ENST00000529270 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
C11orf1-203ENST00000529270 NESP48681 1621 aa13.84□□□□□ -0.19
C11orf1-203ENST00000529270 HMGXB3Q12766 1538 aa13.79□□□□□ -0.2
C11orf1-203ENST00000529270 ATAD2BQ9ULI0 1458 aa13.77□□□□□ -0.2
C11orf1-203ENST00000529270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
C11orf1-203ENST00000529270 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
C11orf1-203ENST00000529270 SAMD1Q6SPF0 538 aaPredicted RBP13.75□□□□□ -0.21
C11orf1-203ENST00000529270 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
C11orf1-203ENST00000529270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.21
C11orf1-203ENST00000529270 SMARCA2P51531 1590 aa13.73□□□□□ -0.21
C11orf1-203ENST00000529270 DCAF8L1A6NGE4 600 aa13.72□□□□□ -0.21
C11orf1-203ENST00000529270 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
C11orf1-203ENST00000529270 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
C11orf1-203ENST00000529270 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
C11orf1-203ENST00000529270 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
C11orf1-203ENST00000529270 BAZ1AQ9NRL2 1556 aaPredicted RBP13.6□□□□□ -0.23
C11orf1-203ENST00000529270 BAZ1BQ9UIG0 1483 aaKnown RBP13.59□□□□□ -0.23
C11orf1-203ENST00000529270 PEG3Q9GZU2 1588 aa13.59□□□□□ -0.23
C11orf1-203ENST00000529270 U3KPZ7 1027 aaPredicted RBP13.58□□□□□ -0.24
C11orf1-203ENST00000529270 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
C11orf1-203ENST00000529270 WDR62O43379 1518 aa13.55□□□□□ -0.24
C11orf1-203ENST00000529270 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
C11orf1-203ENST00000529270 ZNF219Q9P2Y4 722 aaPredicted RBP13.53□□□□□ -0.24
C11orf1-203ENST00000529270 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
C11orf1-203ENST00000529270 SPDYE4A6NLX3 237 aa13.51□□□□□ -0.25
C11orf1-203ENST00000529270 OSCARQ8IYS5 282 aa13.46□□□□□ -0.26
C11orf1-203ENST00000529270 RIMBP3CA6NJZ7 1639 aa13.45□□□□□ -0.26
C11orf1-203ENST00000529270 RIMBP3BA6NNM3 1639 aa13.45□□□□□ -0.26
C11orf1-203ENST00000529270 RIMBP3Q9UFD9 1639 aa13.45□□□□□ -0.26
C11orf1-203ENST00000529270 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
C11orf1-203ENST00000529270 CADPSQ9ULU8 1353 aa13.42□□□□□ -0.26
C11orf1-203ENST00000529270 BCANQ96GW7 911 aa13.4□□□□□ -0.26
C11orf1-203ENST00000529270 APLP2Q06481 763 aa13.39□□□□□ -0.27
C11orf1-203ENST00000529270 PROM2Q8N271 834 aa13.35□□□□□ -0.27
C11orf1-203ENST00000529270 MROH2BQ7Z745 1585 aa13.35□□□□□ -0.27
C11orf1-203ENST00000529270 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
C11orf1-203ENST00000529270 IFNLR1Q8IU57 520 aaPredicted RBP13.33□□□□□ -0.28
C11orf1-203ENST00000529270 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
C11orf1-203ENST00000529270 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
C11orf1-203ENST00000529270 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
C11orf1-203ENST00000529270 VSIG10Q8N0Z9 540 aa13.29□□□□□ -0.28
C11orf1-203ENST00000529270 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.28
C11orf1-203ENST00000529270 FBLN2P98095 1184 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms