RNA–Protein interactions for RNA: ENST00000417171.5

PDZK1-202, Transcript of PDZ domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZK1, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1-202ENST00000417171 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
PDZK1-202ENST00000417171 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
PDZK1-202ENST00000417171 HRCP23327 699 aa15.06■□□□□ 0
PDZK1-202ENST00000417171 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
PDZK1-202ENST00000417171 MYT1Q01538 1121 aa14.82□□□□□ -0.04
PDZK1-202ENST00000417171 PPARGC1BQ86YN6 1023 aaKnown RBP14.49□□□□□ -0.09
PDZK1-202ENST00000417171 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
PDZK1-202ENST00000417171 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
PDZK1-202ENST00000417171 MYO15BQ96JP2 1530 aa14.33□□□□□ -0.12
PDZK1-202ENST00000417171 DCAF1Q9Y4B6 1507 aa14.27□□□□□ -0.13
PDZK1-202ENST00000417171 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
PDZK1-202ENST00000417171 CCDC180Q9P1Z9 1646 aa14.18□□□□□ -0.14
PDZK1-202ENST00000417171 ZEB1P37275 1124 aaPredicted RBP14.13□□□□□ -0.15
PDZK1-202ENST00000417171 TTBK1Q5TCY1 1321 aaPredicted RBP14.08□□□□□ -0.16
PDZK1-202ENST00000417171 TRIM26Q12899 539 aaPredicted RBP14.01□□□□□ -0.17
PDZK1-202ENST00000417171 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
PDZK1-202ENST00000417171 ACIN1Q9UKV3 1341 aaKnown RBP13.96□□□□□ -0.17
PDZK1-202ENST00000417171 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
PDZK1-202ENST00000417171 NEUROD1Q13562 356 aa13.82□□□□□ -0.2
PDZK1-202ENST00000417171 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
PDZK1-202ENST00000417171 CENPBP07199 599 aaPredicted RBP13.76□□□□□ -0.21
PDZK1-202ENST00000417171 LOC105371045A0A1W2PR82 267 aa13.62□□□□□ -0.23
PDZK1-202ENST00000417171 BCL11AQ9H165 835 aa13.55□□□□□ -0.24
PDZK1-202ENST00000417171 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
PDZK1-202ENST00000417171 DIEXFQ68CQ4 756 aaKnown RBP13.48□□□□□ -0.25
PDZK1-202ENST00000417171 FAM9AQ8IZU1 332 aaPredicted RBP13.4□□□□□ -0.26
PDZK1-202ENST00000417171 ANP32EQ9BTT0 268 aa13.39□□□□□ -0.27
PDZK1-202ENST00000417171 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
PDZK1-202ENST00000417171 CLSPNQ9HAW4 1339 aa13.32□□□□□ -0.28
PDZK1-202ENST00000417171 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
PDZK1-202ENST00000417171 CCER1Q8TC90 406 aaPredicted RBP13.24□□□□□ -0.29
PDZK1-202ENST00000417171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
PDZK1-202ENST00000417171 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
PDZK1-202ENST00000417171 ERICH6Q7L0X2 663 aa13.15□□□□□ -0.3
PDZK1-202ENST00000417171 CSRNP3Q8WYN3 585 aa13.15□□□□□ -0.3
PDZK1-202ENST00000417171 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
PDZK1-202ENST00000417171 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
PDZK1-202ENST00000417171 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
PDZK1-202ENST00000417171 SUPT16HQ9Y5B9 1047 aaKnown RBP13.09□□□□□ -0.31
PDZK1-202ENST00000417171 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
PDZK1-202ENST00000417171 MIER1Q8N108 512 aa13.06□□□□□ -0.32
PDZK1-202ENST00000417171 APLP2Q06481 763 aa13□□□□□ -0.33
PDZK1-202ENST00000417171 ABCC9O60706 1549 aa12.95□□□□□ -0.34
PDZK1-202ENST00000417171 WRNQ14191 1432 aaPredicted RBP eCLIP12.94□□□□□ -0.34
PDZK1-202ENST00000417171 RB1CC1Q8TDY2 1594 aa12.83□□□□□ -0.36
PDZK1-202ENST00000417171 MYT1LQ9UL68 1186 aa12.82□□□□□ -0.36
PDZK1-202ENST00000417171 RBM19Q9Y4C8 960 aaKnown RBP12.78□□□□□ -0.36
PDZK1-202ENST00000417171 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
PDZK1-202ENST00000417171 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
PDZK1-202ENST00000417171 PHF23Q9BUL5 403 aaPredicted RBP12.69□□□□□ -0.38
PDZK1-202ENST00000417171 MSH5O43196 834 aa12.68□□□□□ -0.38
PDZK1-202ENST00000417171 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
PDZK1-202ENST00000417171 CEP162Q5TB80 1403 aa12.65□□□□□ -0.38
PDZK1-202ENST00000417171 SCRIBQ14160 1630 aa12.65□□□□□ -0.38
PDZK1-202ENST00000417171 ERICH6BQ5W0A0 696 aa12.65□□□□□ -0.38
PDZK1-202ENST00000417171 NACADO15069 1562 aa12.6□□□□□ -0.39
PDZK1-202ENST00000417171 TNIKQ9UKE5 1360 aa12.59□□□□□ -0.39
PDZK1-202ENST00000417171 FKBP8Q14318 412 aa12.59□□□□□ -0.39
PDZK1-202ENST00000417171 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.39
PDZK1-202ENST00000417171 DEKP35659 375 aaKnown RBP12.57□□□□□ -0.4
PDZK1-202ENST00000417171 BCANQ96GW7 911 aa12.56□□□□□ -0.4
PDZK1-202ENST00000417171 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
PDZK1-202ENST00000417171 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
PDZK1-202ENST00000417171 NEFLP07196 543 aa12.54□□□□□ -0.4
PDZK1-202ENST00000417171 UBE2Q2Q8WVN8 375 aa12.54□□□□□ -0.4
PDZK1-202ENST00000417171 EEA1Q15075 1411 aa12.46□□□□□ -0.41
PDZK1-202ENST00000417171 DHX57Q6P158 1386 aaKnown RBP12.45□□□□□ -0.42
PDZK1-202ENST00000417171 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
PDZK1-202ENST00000417171 SALL2Q9Y467 1007 aaPredicted RBP12.44□□□□□ -0.42
PDZK1-202ENST00000417171 CDK11AQ9UQ88 783 aaPredicted RBP12.42□□□□□ -0.42
PDZK1-202ENST00000417171 ITGAEP38570 1179 aa12.39□□□□□ -0.43
PDZK1-202ENST00000417171 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
PDZK1-202ENST00000417171 GOLGA3Q08378 1498 aa12.38□□□□□ -0.43
PDZK1-202ENST00000417171 CECR2Q9BXF3 1484 aa12.36□□□□□ -0.43
PDZK1-202ENST00000417171 CCER2I3L3R5 266 aa12.35□□□□□ -0.43
PDZK1-202ENST00000417171 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
PDZK1-202ENST00000417171 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
PDZK1-202ENST00000417171 BAZ1AQ9NRL2 1556 aaPredicted RBP12.33□□□□□ -0.44
PDZK1-202ENST00000417171 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
PDZK1-202ENST00000417171 NOP58Q9Y2X3 529 aaKnown RBP12.32□□□□□ -0.44
PDZK1-202ENST00000417171 CUX2O14529 1486 aa12.32□□□□□ -0.44
PDZK1-202ENST00000417171 MROH2BQ7Z745 1585 aa12.32□□□□□ -0.44
PDZK1-202ENST00000417171 SOGA1O94964 1423 aa12.28□□□□□ -0.44
PDZK1-202ENST00000417171 KIF21BO75037 1637 aa12.27□□□□□ -0.44
PDZK1-202ENST00000417171 WIZO95785 1651 aa12.27□□□□□ -0.44
PDZK1-202ENST00000417171 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.44
PDZK1-202ENST00000417171 CLIP1P30622 1438 aa12.27□□□□□ -0.45
PDZK1-202ENST00000417171 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
PDZK1-202ENST00000417171 PPP1R15AO75807 674 aaPredicted RBP12.23□□□□□ -0.45
PDZK1-202ENST00000417171 CEP164Q9UPV0 1460 aa12.23□□□□□ -0.45
PDZK1-202ENST00000417171 IL27Q8NEV9 243 aa12.23□□□□□ -0.45
PDZK1-202ENST00000417171 RTL5Q5HYW3 569 aaPredicted RBP12.22□□□□□ -0.45
PDZK1-202ENST00000417171 PPP4R2Q9NY27 417 aa12.22□□□□□ -0.45
PDZK1-202ENST00000417171 C11orf95C9JLR9 678 aaPredicted RBP12.22□□□□□ -0.45
PDZK1-202ENST00000417171 NBR1Q14596 966 aa12.21□□□□□ -0.45
PDZK1-202ENST00000417171 TRIM52Q96A61 297 aa12.21□□□□□ -0.46
PDZK1-202ENST00000417171 BAZ1BQ9UIG0 1483 aaKnown RBP12.21□□□□□ -0.46
PDZK1-202ENST00000417171 WASHC2AQ641Q2 1341 aa12.2□□□□□ -0.46
PDZK1-202ENST00000417171 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
PDZK1-202ENST00000417171 RRBP1Q9P2E9 1410 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms