RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
TRPS1-209ENST00000519674 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
TRPS1-209ENST00000519674 CCDC180Q9P1Z9 1646 aa14.75□□□□□ -0.05
TRPS1-209ENST00000519674 SHROOM4Q9ULL8 1493 aa14.55□□□□□ -0.08
TRPS1-209ENST00000519674 ZCCHC6Q5VYS8 1495 aaKnown RBP14.54□□□□□ -0.08
TRPS1-209ENST00000519674 MYT1Q01538 1121 aa14.39□□□□□ -0.11
TRPS1-209ENST00000519674 HRCP23327 699 aa14.34□□□□□ -0.11
TRPS1-209ENST00000519674 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.11
TRPS1-209ENST00000519674 SUPT5HO00267 1087 aaKnown RBP14.17□□□□□ -0.14
TRPS1-209ENST00000519674 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
TRPS1-209ENST00000519674 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
TRPS1-209ENST00000519674 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
TRPS1-209ENST00000519674 ABCC9O60706 1549 aa13.81□□□□□ -0.2
TRPS1-209ENST00000519674 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
TRPS1-209ENST00000519674 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
TRPS1-209ENST00000519674 TTBK1Q5TCY1 1321 aaPredicted RBP13.74□□□□□ -0.21
TRPS1-209ENST00000519674 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
TRPS1-209ENST00000519674 NACADO15069 1562 aa13.67□□□□□ -0.22
TRPS1-209ENST00000519674 PCGF6Q9BYE7 350 aa13.63□□□□□ -0.23
TRPS1-209ENST00000519674 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
TRPS1-209ENST00000519674 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
TRPS1-209ENST00000519674 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
TRPS1-209ENST00000519674 MROH2BQ7Z745 1585 aa13.38□□□□□ -0.27
TRPS1-209ENST00000519674 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
TRPS1-209ENST00000519674 WIZO95785 1651 aa13.31□□□□□ -0.28
TRPS1-209ENST00000519674 UNC13AQ9UPW8 1703 aa13.31□□□□□ -0.28
TRPS1-209ENST00000519674 BCL11AQ9H165 835 aa13.28□□□□□ -0.28
TRPS1-209ENST00000519674 ZEB1P37275 1124 aaPredicted RBP13.26□□□□□ -0.29
TRPS1-209ENST00000519674 LOC105371045A0A1W2PR82 267 aa13.26□□□□□ -0.29
TRPS1-209ENST00000519674 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
TRPS1-209ENST00000519674 NEUROD1Q13562 356 aa13.24□□□□□ -0.29
TRPS1-209ENST00000519674 PRKCSHP14314 528 aaPredicted RBP13.24□□□□□ -0.29
TRPS1-209ENST00000519674 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
TRPS1-209ENST00000519674 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
TRPS1-209ENST00000519674 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
TRPS1-209ENST00000519674 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
TRPS1-209ENST00000519674 PABPN1Q86U42 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRPS1-209ENST00000519674 FAM9AQ8IZU1 332 aaPredicted RBP13.15□□□□□ -0.3
TRPS1-209ENST00000519674 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
TRPS1-209ENST00000519674 BICRAQ9NZM4 1560 aa13.12□□□□□ -0.31
TRPS1-209ENST00000519674 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
TRPS1-209ENST00000519674 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
TRPS1-209ENST00000519674 CCDC88BA6NC98 1476 aa13.02□□□□□ -0.33
TRPS1-209ENST00000519674 SMARCA2P51531 1590 aa13.02□□□□□ -0.33
TRPS1-209ENST00000519674 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
TRPS1-209ENST00000519674 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.34
TRPS1-209ENST00000519674 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
TRPS1-209ENST00000519674 APLP2Q06481 763 aa12.92□□□□□ -0.34
TRPS1-209ENST00000519674 PEG3Q9GZU2 1588 aa12.92□□□□□ -0.34
TRPS1-209ENST00000519674 ANP32EQ9BTT0 268 aa12.92□□□□□ -0.34
TRPS1-209ENST00000519674 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
TRPS1-209ENST00000519674 BAZ1BQ9UIG0 1483 aaKnown RBP12.83□□□□□ -0.36
TRPS1-209ENST00000519674 SOGA1O94964 1423 aa12.77□□□□□ -0.37
TRPS1-209ENST00000519674 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
TRPS1-209ENST00000519674 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
TRPS1-209ENST00000519674 WRNQ14191 1432 aaPredicted RBP eCLIP12.74□□□□□ -0.37
TRPS1-209ENST00000519674 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
TRPS1-209ENST00000519674 SYNJ1O43426 1573 aa12.7□□□□□ -0.38
TRPS1-209ENST00000519674 EEA1Q15075 1411 aa12.67□□□□□ -0.38
TRPS1-209ENST00000519674 HMGXB3Q12766 1538 aa12.64□□□□□ -0.39
TRPS1-209ENST00000519674 NCAPD3P42695 1498 aa12.64□□□□□ -0.39
TRPS1-209ENST00000519674 CEP162Q5TB80 1403 aa12.63□□□□□ -0.39
TRPS1-209ENST00000519674 UBTFP17480 764 aaKnown RBP12.62□□□□□ -0.39
TRPS1-209ENST00000519674 TNIKQ9UKE5 1360 aa12.61□□□□□ -0.39
TRPS1-209ENST00000519674 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
TRPS1-209ENST00000519674 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
TRPS1-209ENST00000519674 TOP2BQ02880 1626 aa12.56□□□□□ -0.4
TRPS1-209ENST00000519674 CLSPNQ9HAW4 1339 aa12.55□□□□□ -0.4
TRPS1-209ENST00000519674 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
TRPS1-209ENST00000519674 KIF21BO75037 1637 aa12.52□□□□□ -0.4
TRPS1-209ENST00000519674 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
TRPS1-209ENST00000519674 YTHDC1Q96MU7 727 aaKnown RBP12.5□□□□□ -0.41
TRPS1-209ENST00000519674 CFTRP13569 1480 aa12.49□□□□□ -0.41
TRPS1-209ENST00000519674 SUPT16HQ9Y5B9 1047 aaKnown RBP12.48□□□□□ -0.41
TRPS1-209ENST00000519674 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
TRPS1-209ENST00000519674 CUX1P39880 1505 aa12.47□□□□□ -0.41
TRPS1-209ENST00000519674 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
TRPS1-209ENST00000519674 CLIP1P30622 1438 aa12.44□□□□□ -0.42
TRPS1-209ENST00000519674 RANGAP1P46060 587 aaPredicted RBP12.43□□□□□ -0.42
TRPS1-209ENST00000519674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
TRPS1-209ENST00000519674 PRDM2Q13029 1718 aa12.41□□□□□ -0.42
TRPS1-209ENST00000519674 CCER1Q8TC90 406 aaPredicted RBP12.41□□□□□ -0.42
TRPS1-209ENST00000519674 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
TRPS1-209ENST00000519674 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
TRPS1-209ENST00000519674 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
TRPS1-209ENST00000519674 PRXQ9BXM0 1461 aa12.36□□□□□ -0.43
TRPS1-209ENST00000519674 MIER1Q8N108 512 aa12.36□□□□□ -0.43
TRPS1-209ENST00000519674 VPS8Q8N3P4 1428 aa12.36□□□□□ -0.43
TRPS1-209ENST00000519674 ERICH3Q5RHP9 1530 aa12.36□□□□□ -0.43
TRPS1-209ENST00000519674 ANO8Q9HCE9 1232 aaPredicted RBP12.35□□□□□ -0.43
TRPS1-209ENST00000519674 CUX2O14529 1486 aa12.29□□□□□ -0.44
TRPS1-209ENST00000519674 UBE2Q2Q8WVN8 375 aa12.28□□□□□ -0.44
TRPS1-209ENST00000519674 FGD5Q6ZNL6 1462 aa12.28□□□□□ -0.44
TRPS1-209ENST00000519674 FANCD2Q9BXW9 1451 aa12.28□□□□□ -0.44
TRPS1-209ENST00000519674 ARAP1Q96P48 1450 aa12.25□□□□□ -0.45
TRPS1-209ENST00000519674 NESP48681 1621 aa12.25□□□□□ -0.45
TRPS1-209ENST00000519674 IGF1RP08069 1367 aa12.23□□□□□ -0.45
TRPS1-209ENST00000519674 MYT1LQ9UL68 1186 aa12.22□□□□□ -0.45
TRPS1-209ENST00000519674 HNRNPUL2Q1KMD3 747 aaKnown RBP12.22□□□□□ -0.45
TRPS1-209ENST00000519674 RBM19Q9Y4C8 960 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms