Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 RHOQP1-201ENST00000555758 579 ntBASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 SNORD3B-1-201ENST00000577988 758 ntBASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 AC084346.2-201ENST00000607097 949 ntBASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 AP000322.3-201ENST00000608665 388 ntBASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 AP001184.1-201ENST00000637936 376 ntBASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PARPBPQ9NWS1 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 AC025183.3-201ENST00000623526 1482 ntBASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 SNORA50C-201ENST00000408535 133 ntBASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 NOC2LP1-201ENST00000450578 752 ntBASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 SNORA50.1-201ENST00000628590 135 ntBASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
PARPBPQ9NWS1 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PARPBPQ9NWS1 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms