RNA–Protein interactions for RNA: ENST00000408535.2

SNORA50C-201, Transcript of small nucleolar RNA, H/ACA box 50C, humanhuman

BASIC

Gene SNORA50C, Length 133 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA50C-201ENST00000408535 NISCHQ9Y2I1 1504 aa31.67■■■□□ 2.66
SNORA50C-201ENST00000408535 CCDC180Q9P1Z9 1646 aa27.71■■■□□ 2.03
SNORA50C-201ENST00000408535 ZCCHC6Q5VYS8 1495 aaKnown RBP26.64■■□□□ 1.86
SNORA50C-201ENST00000408535 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
SNORA50C-201ENST00000408535 MYO15BQ96JP2 1530 aa26.02■■□□□ 1.76
SNORA50C-201ENST00000408535 ABCC9O60706 1549 aa25.79■■□□□ 1.72
SNORA50C-201ENST00000408535 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
SNORA50C-201ENST00000408535 NACADO15069 1562 aa25.73■■□□□ 1.71
SNORA50C-201ENST00000408535 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
SNORA50C-201ENST00000408535 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
SNORA50C-201ENST00000408535 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
SNORA50C-201ENST00000408535 UNC13AQ9UPW8 1703 aa24.96■■□□□ 1.59
SNORA50C-201ENST00000408535 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
SNORA50C-201ENST00000408535 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
SNORA50C-201ENST00000408535 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
SNORA50C-201ENST00000408535 CECR2Q9BXF3 1484 aa24.48■■□□□ 1.51
SNORA50C-201ENST00000408535 BAZ1AQ9NRL2 1556 aaPredicted RBP24.47■■□□□ 1.51
SNORA50C-201ENST00000408535 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
SNORA50C-201ENST00000408535 SMARCA4P51532 1647 aa24.33■■□□□ 1.49
SNORA50C-201ENST00000408535 PABPN1Q86U42 306 aaKnown RBP eCLIP24.25■■□□□ 1.47
SNORA50C-201ENST00000408535 WIZO95785 1651 aa24.22■■□□□ 1.47
SNORA50C-201ENST00000408535 PEG3Q9GZU2 1588 aa24.14■■□□□ 1.45
SNORA50C-201ENST00000408535 TOP2AP11388 1531 aaKnown RBP24.05■■□□□ 1.44
SNORA50C-201ENST00000408535 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
SNORA50C-201ENST00000408535 ATAD2BQ9ULI0 1458 aa23.87■■□□□ 1.41
SNORA50C-201ENST00000408535 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
SNORA50C-201ENST00000408535 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
SNORA50C-201ENST00000408535 CCDC88BA6NC98 1476 aa23.72■■□□□ 1.39
SNORA50C-201ENST00000408535 HMGXB3Q12766 1538 aa23.72■■□□□ 1.39
SNORA50C-201ENST00000408535 BAZ1BQ9UIG0 1483 aaKnown RBP23.71■■□□□ 1.39
SNORA50C-201ENST00000408535 NCAPD3P42695 1498 aa23.7■■□□□ 1.38
SNORA50C-201ENST00000408535 CC2D2AQ9P2K1 1620 aa23.47■■□□□ 1.35
SNORA50C-201ENST00000408535 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
SNORA50C-201ENST00000408535 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
SNORA50C-201ENST00000408535 ABCC8Q09428 1581 aa23.19■■□□□ 1.3
SNORA50C-201ENST00000408535 CFTRP13569 1480 aa23.18■■□□□ 1.3
SNORA50C-201ENST00000408535 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
SNORA50C-201ENST00000408535 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
SNORA50C-201ENST00000408535 BIVM-ERCC5R4GMW8 1640 aa23.01■■□□□ 1.27
SNORA50C-201ENST00000408535 SYNJ1O43426 1573 aa23.01■■□□□ 1.27
SNORA50C-201ENST00000408535 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
SNORA50C-201ENST00000408535 EEA1Q15075 1411 aa22.94■■□□□ 1.26
SNORA50C-201ENST00000408535 LAMC3Q9Y6N6 1575 aa22.9■■□□□ 1.26
SNORA50C-201ENST00000408535 CUX1P39880 1505 aa22.82■■□□□ 1.24
SNORA50C-201ENST00000408535 LOC105371045A0A1W2PR82 267 aa22.8■■□□□ 1.24
SNORA50C-201ENST00000408535 SOGA1O94964 1423 aa22.77■■□□□ 1.24
SNORA50C-201ENST00000408535 FANCD2Q9BXW9 1451 aa22.76■■□□□ 1.23
SNORA50C-201ENST00000408535 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
SNORA50C-201ENST00000408535 NESP48681 1621 aa22.69■■□□□ 1.22
SNORA50C-201ENST00000408535 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
SNORA50C-201ENST00000408535 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
SNORA50C-201ENST00000408535 CSRNP3Q8WYN3 585 aa22.65■■□□□ 1.22
SNORA50C-201ENST00000408535 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
SNORA50C-201ENST00000408535 KIF21BO75037 1637 aa22.63■■□□□ 1.21
SNORA50C-201ENST00000408535 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
SNORA50C-201ENST00000408535 DNAJC5BQ9UF47 199 aa22.62■■□□□ 1.21
SNORA50C-201ENST00000408535 KIF21AQ7Z4S6 1674 aa22.55■■□□□ 1.2
SNORA50C-201ENST00000408535 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
SNORA50C-201ENST00000408535 GOLGA3Q08378 1498 aa22.54■■□□□ 1.2
SNORA50C-201ENST00000408535 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
SNORA50C-201ENST00000408535 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
SNORA50C-201ENST00000408535 TNIKQ9UKE5 1360 aa22.5■■□□□ 1.19
SNORA50C-201ENST00000408535 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
SNORA50C-201ENST00000408535 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
SNORA50C-201ENST00000408535 PRXQ9BXM0 1461 aa22.44■■□□□ 1.18
SNORA50C-201ENST00000408535 POLA1P09884 1462 aaPredicted RBP22.43■■□□□ 1.18
SNORA50C-201ENST00000408535 ABCA10Q8WWZ4 1543 aa22.42■■□□□ 1.18
SNORA50C-201ENST00000408535 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
SNORA50C-201ENST00000408535 CUX2O14529 1486 aa22.38■■□□□ 1.17
SNORA50C-201ENST00000408535 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
SNORA50C-201ENST00000408535 RAPGEF2Q9Y4G8 1499 aa22.33■■□□□ 1.16
SNORA50C-201ENST00000408535 CEP162Q5TB80 1403 aa22.31■■□□□ 1.16
SNORA50C-201ENST00000408535 IGF1RP08069 1367 aa22.29■■□□□ 1.16
SNORA50C-201ENST00000408535 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
SNORA50C-201ENST00000408535 WDR62O43379 1518 aa22.27■■□□□ 1.16
SNORA50C-201ENST00000408535 TARBP1Q13395 1621 aaKnown RBP22.27■■□□□ 1.16
SNORA50C-201ENST00000408535 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
SNORA50C-201ENST00000408535 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
SNORA50C-201ENST00000408535 ABCA5Q8WWZ7 1642 aa22.25■■□□□ 1.15
SNORA50C-201ENST00000408535 CUL7Q14999 1698 aa22.23■■□□□ 1.15
SNORA50C-201ENST00000408535 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
SNORA50C-201ENST00000408535 CARMIL1Q5VZK9 1371 aa22.17■■□□□ 1.14
SNORA50C-201ENST00000408535 CLIP1P30622 1438 aa22.13■■□□□ 1.13
SNORA50C-201ENST00000408535 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
SNORA50C-201ENST00000408535 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
SNORA50C-201ENST00000408535 IFT140Q96RY7 1462 aa22.11■■□□□ 1.13
SNORA50C-201ENST00000408535 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
SNORA50C-201ENST00000408535 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
SNORA50C-201ENST00000408535 CTTNBP2Q8WZ74 1663 aa22■■□□□ 1.11
SNORA50C-201ENST00000408535 VPS8Q8N3P4 1428 aa21.99■■□□□ 1.11
SNORA50C-201ENST00000408535 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
SNORA50C-201ENST00000408535 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
SNORA50C-201ENST00000408535 ADAMTS12P58397 1594 aa21.92■■□□□ 1.1
SNORA50C-201ENST00000408535 ARAP1Q96P48 1450 aa21.92■■□□□ 1.1
SNORA50C-201ENST00000408535 FHAD1B1AJZ9 1412 aa21.91■■□□□ 1.1
SNORA50C-201ENST00000408535 ARHGAP35Q9NRY4 1499 aa21.9■■□□□ 1.1
SNORA50C-201ENST00000408535 EIF4G3O43432 1585 aaKnown RBP21.9■■□□□ 1.1
SNORA50C-201ENST00000408535 AQRO60306 1485 aaKnown RBP eCLIP21.89■■□□□ 1.09
SNORA50C-201ENST00000408535 EFCAB5A4FU69 1503 aa21.87■■□□□ 1.09
SNORA50C-201ENST00000408535 ZNF608Q9ULD9 1512 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms