RNA–Protein interactions for RNA: ENST00000248899.10

NCF4-201, Transcript of neutrophil cytosolic factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCF4, Length 1,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCF4-201ENST00000248899 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
NCF4-201ENST00000248899 CCDC180Q9P1Z9 1646 aa29.65■■■□□ 2.34
NCF4-201ENST00000248899 ABCC9O60706 1549 aa29.09■■■□□ 2.25
NCF4-201ENST00000248899 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
NCF4-201ENST00000248899 NACADO15069 1562 aa27.83■■■□□ 2.05
NCF4-201ENST00000248899 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.02
NCF4-201ENST00000248899 ZCCHC6Q5VYS8 1495 aaKnown RBP27.67■■■□□ 2.02
NCF4-201ENST00000248899 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
NCF4-201ENST00000248899 UNC13AQ9UPW8 1703 aa27.48■■□□□ 1.99
NCF4-201ENST00000248899 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.99
NCF4-201ENST00000248899 BICRAQ9NZM4 1560 aa27.16■■□□□ 1.94
NCF4-201ENST00000248899 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
NCF4-201ENST00000248899 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
NCF4-201ENST00000248899 DNAJC5BQ9UF47 199 aa26.82■■□□□ 1.88
NCF4-201ENST00000248899 SHROOM4Q9ULL8 1493 aa26.72■■□□□ 1.87
NCF4-201ENST00000248899 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
NCF4-201ENST00000248899 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
NCF4-201ENST00000248899 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
NCF4-201ENST00000248899 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
NCF4-201ENST00000248899 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
NCF4-201ENST00000248899 ATAD2BQ9ULI0 1458 aa25.68■■□□□ 1.7
NCF4-201ENST00000248899 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
NCF4-201ENST00000248899 SMARCA2P51531 1590 aa25.64■■□□□ 1.7
NCF4-201ENST00000248899 MROH2BQ7Z745 1585 aa25.63■■□□□ 1.69
NCF4-201ENST00000248899 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
NCF4-201ENST00000248899 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
NCF4-201ENST00000248899 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
NCF4-201ENST00000248899 WIZO95785 1651 aa25.4■■□□□ 1.66
NCF4-201ENST00000248899 RSF1Q96T23 1441 aaPredicted RBP25.25■■□□□ 1.63
NCF4-201ENST00000248899 NESP48681 1621 aa25.17■■□□□ 1.62
NCF4-201ENST00000248899 TOP2AP11388 1531 aaKnown RBP25.06■■□□□ 1.6
NCF4-201ENST00000248899 LAMC3Q9Y6N6 1575 aa25.04■■□□□ 1.6
NCF4-201ENST00000248899 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
NCF4-201ENST00000248899 KIF21AQ7Z4S6 1674 aa24.95■■□□□ 1.58
NCF4-201ENST00000248899 CADPSQ9ULU8 1353 aa24.88■■□□□ 1.57
NCF4-201ENST00000248899 THOC2Q8NI27 1593 aaKnown RBP24.85■■□□□ 1.57
NCF4-201ENST00000248899 CUX2O14529 1486 aa24.81■■□□□ 1.56
NCF4-201ENST00000248899 PDS5BQ9NTI5 1447 aa24.8■■□□□ 1.56
NCF4-201ENST00000248899 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
NCF4-201ENST00000248899 CCDC88BA6NC98 1476 aa24.74■■□□□ 1.55
NCF4-201ENST00000248899 CFTRP13569 1480 aa24.74■■□□□ 1.55
NCF4-201ENST00000248899 PRDM2Q13029 1718 aa24.71■■□□□ 1.55
NCF4-201ENST00000248899 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.53
NCF4-201ENST00000248899 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
NCF4-201ENST00000248899 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
NCF4-201ENST00000248899 WDR62O43379 1518 aa24.58■■□□□ 1.52
NCF4-201ENST00000248899 URB2Q14146 1524 aaKnown RBP24.45■■□□□ 1.5
NCF4-201ENST00000248899 TOPBP1Q92547 1522 aa24.26■■□□□ 1.47
NCF4-201ENST00000248899 DNMBPQ6XZF7 1577 aa24.23■■□□□ 1.47
NCF4-201ENST00000248899 DNAJC5Q9H3Z4 198 aa24.16■■□□□ 1.46
NCF4-201ENST00000248899 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
NCF4-201ENST00000248899 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
NCF4-201ENST00000248899 CUX1P39880 1505 aa24.06■■□□□ 1.44
NCF4-201ENST00000248899 ZNF608Q9ULD9 1512 aaPredicted RBP24.06■■□□□ 1.44
NCF4-201ENST00000248899 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
NCF4-201ENST00000248899 POLA1P09884 1462 aaPredicted RBP24.05■■□□□ 1.44
NCF4-201ENST00000248899 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
NCF4-201ENST00000248899 FGD5Q6ZNL6 1462 aa23.97■■□□□ 1.43
NCF4-201ENST00000248899 RAD54L2Q9Y4B4 1467 aa23.95■■□□□ 1.42
NCF4-201ENST00000248899 SOGA1O94964 1423 aa23.89■■□□□ 1.41
NCF4-201ENST00000248899 WDR97A6NE52 1622 aa23.89■■□□□ 1.41
NCF4-201ENST00000248899 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.41
NCF4-201ENST00000248899 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
NCF4-201ENST00000248899 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
NCF4-201ENST00000248899 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
NCF4-201ENST00000248899 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
NCF4-201ENST00000248899 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
NCF4-201ENST00000248899 CHD1O14646 1710 aa23.78■■□□□ 1.4
NCF4-201ENST00000248899 PBRM1Q86U86 1689 aa23.72■■□□□ 1.39
NCF4-201ENST00000248899 ABCA10Q8WWZ4 1543 aa23.71■■□□□ 1.39
NCF4-201ENST00000248899 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.39
NCF4-201ENST00000248899 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
NCF4-201ENST00000248899 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
NCF4-201ENST00000248899 SNAPC4Q5SXM2 1469 aa23.66■■□□□ 1.38
NCF4-201ENST00000248899 GRIN2BQ13224 1484 aa23.63■■□□□ 1.37
NCF4-201ENST00000248899 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
NCF4-201ENST00000248899 MAGI1Q96QZ7 1491 aaPredicted RBP23.6■■□□□ 1.37
NCF4-201ENST00000248899 FBLN2P98095 1184 aa23.54■■□□□ 1.36
NCF4-201ENST00000248899 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
NCF4-201ENST00000248899 RIMBP3CA6NJZ7 1639 aa23.49■■□□□ 1.35
NCF4-201ENST00000248899 RIMBP3BA6NNM3 1639 aa23.49■■□□□ 1.35
NCF4-201ENST00000248899 RIMBP3Q9UFD9 1639 aa23.49■■□□□ 1.35
NCF4-201ENST00000248899 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
NCF4-201ENST00000248899 CLASP1Q7Z460 1538 aa23.44■■□□□ 1.34
NCF4-201ENST00000248899 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
NCF4-201ENST00000248899 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
NCF4-201ENST00000248899 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
NCF4-201ENST00000248899 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
NCF4-201ENST00000248899 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
NCF4-201ENST00000248899 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.33
NCF4-201ENST00000248899 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
NCF4-201ENST00000248899 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
NCF4-201ENST00000248899 NUP160Q12769 1436 aa23.26■■□□□ 1.31
NCF4-201ENST00000248899 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
NCF4-201ENST00000248899 CUL7Q14999 1698 aa23.22■■□□□ 1.31
NCF4-201ENST00000248899 IGF1RP08069 1367 aa23.2■■□□□ 1.3
NCF4-201ENST00000248899 SHROOM2Q13796 1616 aa23.17■■□□□ 1.3
NCF4-201ENST00000248899 ERCC6L2Q5T890 1561 aa23.15■■□□□ 1.3
NCF4-201ENST00000248899 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
NCF4-201ENST00000248899 CYB5RLQ6IPT4 315 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms