RNA–Protein interactions for RNA: ENST00000259351.9

RALGPS1-201, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RALGPS1, Length 6,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-201ENST00000259351 DCAF8L2P0C7V8 631 aa22.47■■□□□ 1.19
RALGPS1-201ENST00000259351 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
RALGPS1-201ENST00000259351 SHROOM4Q9ULL8 1493 aa21.06■□□□□ 0.96
RALGPS1-201ENST00000259351 NISCHQ9Y2I1 1504 aa20.98■□□□□ 0.95
RALGPS1-201ENST00000259351 EHMT2Q96KQ7 1210 aa20.97■□□□□ 0.95
RALGPS1-201ENST00000259351 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.84
RALGPS1-201ENST00000259351 TTBK1Q5TCY1 1321 aaPredicted RBP20.26■□□□□ 0.83
RALGPS1-201ENST00000259351 APLP2Q06481 763 aa20.21■□□□□ 0.83
RALGPS1-201ENST00000259351 PCGF6Q9BYE7 350 aa20.2■□□□□ 0.82
RALGPS1-201ENST00000259351 PELP1Q8IZL8 1130 aaKnown RBP20.17■□□□□ 0.82
RALGPS1-201ENST00000259351 RANGAP1P46060 587 aaPredicted RBP19.94■□□□□ 0.78
RALGPS1-201ENST00000259351 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
RALGPS1-201ENST00000259351 CCER1Q8TC90 406 aaPredicted RBP19.73■□□□□ 0.75
RALGPS1-201ENST00000259351 CENPBP07199 599 aaPredicted RBP19.64■□□□□ 0.73
RALGPS1-201ENST00000259351 ATP1B4Q9UN42 357 aaPredicted RBP19.63■□□□□ 0.73
RALGPS1-201ENST00000259351 ZEB1P37275 1124 aaPredicted RBP19.57■□□□□ 0.72
RALGPS1-201ENST00000259351 UBTFP17480 764 aaKnown RBP19.55■□□□□ 0.72
RALGPS1-201ENST00000259351 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.72
RALGPS1-201ENST00000259351 ERICH6Q7L0X2 663 aa19.47■□□□□ 0.71
RALGPS1-201ENST00000259351 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
RALGPS1-201ENST00000259351 NEFLP07196 543 aa19.21■□□□□ 0.67
RALGPS1-201ENST00000259351 TRIM26Q12899 539 aaPredicted RBP19.14■□□□□ 0.66
RALGPS1-201ENST00000259351 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
RALGPS1-201ENST00000259351 ITGAEP38570 1179 aa19.08■□□□□ 0.64
RALGPS1-201ENST00000259351 HRCP23327 699 aa19.05■□□□□ 0.64
RALGPS1-201ENST00000259351 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
RALGPS1-201ENST00000259351 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
RALGPS1-201ENST00000259351 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
RALGPS1-201ENST00000259351 CNGB1Q14028 1251 aaPredicted RBP18.88■□□□□ 0.61
RALGPS1-201ENST00000259351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
RALGPS1-201ENST00000259351 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
RALGPS1-201ENST00000259351 MYT1Q01538 1121 aa18.71■□□□□ 0.59
RALGPS1-201ENST00000259351 DAXXQ9UER7 740 aaPredicted RBP18.62■□□□□ 0.57
RALGPS1-201ENST00000259351 DIEXFQ68CQ4 756 aaKnown RBP18.59■□□□□ 0.57
RALGPS1-201ENST00000259351 FAM50AQ14320 339 aaKnown RBP18.46■□□□□ 0.55
RALGPS1-201ENST00000259351 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
RALGPS1-201ENST00000259351 NEUROD1Q13562 356 aa18.4■□□□□ 0.54
RALGPS1-201ENST00000259351 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
RALGPS1-201ENST00000259351 BCANQ96GW7 911 aa18.36■□□□□ 0.53
RALGPS1-201ENST00000259351 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
RALGPS1-201ENST00000259351 CLSPNQ9HAW4 1339 aa18.31■□□□□ 0.52
RALGPS1-201ENST00000259351 GTF3C3Q9Y5Q9 886 aa18.3■□□□□ 0.52
RALGPS1-201ENST00000259351 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
RALGPS1-201ENST00000259351 ZNF326Q5BKZ1 582 aaKnown RBP18.23■□□□□ 0.51
RALGPS1-201ENST00000259351 ZNF316A6NFI3 1004 aaPredicted RBP18.22■□□□□ 0.51
RALGPS1-201ENST00000259351 ABCC9O60706 1549 aa18.2■□□□□ 0.5
RALGPS1-201ENST00000259351 ANP32CO43423 234 aa18.12■□□□□ 0.49
RALGPS1-201ENST00000259351 P3H3Q8IVL6 736 aa18.07■□□□□ 0.48
RALGPS1-201ENST00000259351 ARID3CA6NKF2 412 aa18.06■□□□□ 0.48
RALGPS1-201ENST00000259351 FBLN2P98095 1184 aa18.05■□□□□ 0.48
RALGPS1-201ENST00000259351 CDK11AQ9UQ88 783 aaPredicted RBP18■□□□□ 0.47
RALGPS1-201ENST00000259351 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
RALGPS1-201ENST00000259351 ACIN1Q9UKV3 1341 aaKnown RBP17.95■□□□□ 0.46
RALGPS1-201ENST00000259351 CSRNP3Q8WYN3 585 aa17.94■□□□□ 0.46
RALGPS1-201ENST00000259351 ZNF777Q9ULD5 760 aaPredicted RBP17.85■□□□□ 0.45
RALGPS1-201ENST00000259351 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
RALGPS1-201ENST00000259351 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
RALGPS1-201ENST00000259351 ZBTB47Q9UFB7 747 aaPredicted RBP17.82■□□□□ 0.44
RALGPS1-201ENST00000259351 NPM2Q86SE8 214 aaKnown RBP17.76■□□□□ 0.43
RALGPS1-201ENST00000259351 FKBP8Q14318 412 aa17.74■□□□□ 0.43
RALGPS1-201ENST00000259351 DDX10Q13206 875 aaKnown RBP17.71■□□□□ 0.43
RALGPS1-201ENST00000259351 ANP32AP39687 249 aaKnown RBP17.68■□□□□ 0.42
RALGPS1-201ENST00000259351 HNRNPUQ00839 825 aaKnown RBP eCLIP17.67■□□□□ 0.42
RALGPS1-201ENST00000259351 NEFMP07197 916 aa17.66■□□□□ 0.42
RALGPS1-201ENST00000259351 SALL2Q9Y467 1007 aaPredicted RBP17.65■□□□□ 0.42
RALGPS1-201ENST00000259351 FAM9BQ8IZU0 186 aa17.65■□□□□ 0.42
RALGPS1-201ENST00000259351 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
RALGPS1-201ENST00000259351 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
RALGPS1-201ENST00000259351 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.4
RALGPS1-201ENST00000259351 HIRIP3Q9BW71 556 aaPredicted RBP17.54■□□□□ 0.4
RALGPS1-201ENST00000259351 SCRIBQ14160 1630 aa17.52■□□□□ 0.39
RALGPS1-201ENST00000259351 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
RALGPS1-201ENST00000259351 MIER1Q8N108 512 aa17.48■□□□□ 0.39
RALGPS1-201ENST00000259351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.39
RALGPS1-201ENST00000259351 IRX6P78412 446 aaPredicted RBP17.46■□□□□ 0.39
RALGPS1-201ENST00000259351 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
RALGPS1-201ENST00000259351 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
RALGPS1-201ENST00000259351 KDM2AQ9Y2K7 1162 aa17.43■□□□□ 0.38
RALGPS1-201ENST00000259351 SCAF1Q9H7N4 1312 aaKnown RBP17.43■□□□□ 0.38
RALGPS1-201ENST00000259351 EIF5BO60841 1220 aaKnown RBP17.43■□□□□ 0.38
RALGPS1-201ENST00000259351 HSP90AA1P07900 732 aaKnown RBP17.43■□□□□ 0.38
RALGPS1-201ENST00000259351 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
RALGPS1-201ENST00000259351 STAG3Q9UJ98 1225 aa17.42■□□□□ 0.38
RALGPS1-201ENST00000259351 MRS2Q9HD23 443 aa17.41■□□□□ 0.38
RALGPS1-201ENST00000259351 NBR1Q14596 966 aa17.41■□□□□ 0.38
RALGPS1-201ENST00000259351 ESF1Q9H501 851 aaKnown RBP17.39■□□□□ 0.37
RALGPS1-201ENST00000259351 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
RALGPS1-201ENST00000259351 ARXQ96QS3 562 aa17.34■□□□□ 0.37
RALGPS1-201ENST00000259351 SENP3-EIF4A1A0A087X0R7 540 aa17.34■□□□□ 0.37
RALGPS1-201ENST00000259351 ZCCHC6Q5VYS8 1495 aaKnown RBP17.32■□□□□ 0.36
RALGPS1-201ENST00000259351 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
RALGPS1-201ENST00000259351 MTUS2Q5JR59 1369 aa17.31■□□□□ 0.36
RALGPS1-201ENST00000259351 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
RALGPS1-201ENST00000259351 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
RALGPS1-201ENST00000259351 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
RALGPS1-201ENST00000259351 TSPY4P0CV99 314 aa17.29■□□□□ 0.36
RALGPS1-201ENST00000259351 TSPY10P0CW01 314 aa17.29■□□□□ 0.36
RALGPS1-201ENST00000259351 MYO15BQ96JP2 1530 aa17.28■□□□□ 0.36
RALGPS1-201ENST00000259351 CLIP1P30622 1438 aa17.27■□□□□ 0.36
RALGPS1-201ENST00000259351 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms