RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
BDNF-208ENST00000418212 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
BDNF-208ENST00000418212 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
BDNF-208ENST00000418212 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
BDNF-208ENST00000418212 EHMT2Q96KQ7 1210 aa21.84■■□□□ 1.09
BDNF-208ENST00000418212 FAM9AQ8IZU1 332 aaPredicted RBP21.31■■□□□ 1
BDNF-208ENST00000418212 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.95
BDNF-208ENST00000418212 PCGF6Q9BYE7 350 aa20.9■□□□□ 0.94
BDNF-208ENST00000418212 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.93
BDNF-208ENST00000418212 APLP2Q06481 763 aa20.81■□□□□ 0.92
BDNF-208ENST00000418212 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
BDNF-208ENST00000418212 UBTFP17480 764 aaKnown RBP20.47■□□□□ 0.87
BDNF-208ENST00000418212 PELP1Q8IZL8 1130 aaKnown RBP20.46■□□□□ 0.87
BDNF-208ENST00000418212 PPARGC1BQ86YN6 1023 aaKnown RBP20.44■□□□□ 0.86
BDNF-208ENST00000418212 ATP1B4Q9UN42 357 aaPredicted RBP20.42■□□□□ 0.86
BDNF-208ENST00000418212 CCER1Q8TC90 406 aaPredicted RBP20.29■□□□□ 0.84
BDNF-208ENST00000418212 LOC105371045A0A1W2PR82 267 aa20.28■□□□□ 0.84
BDNF-208ENST00000418212 HRCP23327 699 aa20.23■□□□□ 0.83
BDNF-208ENST00000418212 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
BDNF-208ENST00000418212 MYT1Q01538 1121 aa20.12■□□□□ 0.81
BDNF-208ENST00000418212 ABCC9O60706 1549 aa20.04■□□□□ 0.8
BDNF-208ENST00000418212 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
BDNF-208ENST00000418212 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
BDNF-208ENST00000418212 TRIM26Q12899 539 aaPredicted RBP19.88■□□□□ 0.77
BDNF-208ENST00000418212 ITGAEP38570 1179 aa19.88■□□□□ 0.77
BDNF-208ENST00000418212 YTHDC1Q96MU7 727 aaKnown RBP19.78■□□□□ 0.76
BDNF-208ENST00000418212 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
BDNF-208ENST00000418212 CENPBP07199 599 aaPredicted RBP19.74■□□□□ 0.75
BDNF-208ENST00000418212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.7■□□□□ 0.74
BDNF-208ENST00000418212 MYT1LQ9UL68 1186 aa19.43■□□□□ 0.7
BDNF-208ENST00000418212 CNGB1Q14028 1251 aaPredicted RBP19.42■□□□□ 0.7
BDNF-208ENST00000418212 POLR3GLQ9BT43 218 aa19.41■□□□□ 0.7
BDNF-208ENST00000418212 NEFLP07196 543 aa19.29■□□□□ 0.68
BDNF-208ENST00000418212 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
BDNF-208ENST00000418212 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
BDNF-208ENST00000418212 FBLN2P98095 1184 aa19.18■□□□□ 0.66
BDNF-208ENST00000418212 P3H3Q8IVL6 736 aa19.18■□□□□ 0.66
BDNF-208ENST00000418212 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
BDNF-208ENST00000418212 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
BDNF-208ENST00000418212 ZCCHC6Q5VYS8 1495 aaKnown RBP19.14■□□□□ 0.65
BDNF-208ENST00000418212 ARID3CA6NKF2 412 aa19.12■□□□□ 0.65
BDNF-208ENST00000418212 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
BDNF-208ENST00000418212 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
BDNF-208ENST00000418212 NEUROD1Q13562 356 aa19.11■□□□□ 0.65
BDNF-208ENST00000418212 TRIM52Q96A61 297 aa19.07■□□□□ 0.64
BDNF-208ENST00000418212 GTF3C3Q9Y5Q9 886 aa19.06■□□□□ 0.64
BDNF-208ENST00000418212 ACIN1Q9UKV3 1341 aaKnown RBP18.94■□□□□ 0.62
BDNF-208ENST00000418212 ZNF326Q5BKZ1 582 aaKnown RBP18.91■□□□□ 0.62
BDNF-208ENST00000418212 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
BDNF-208ENST00000418212 ZNF777Q9ULD5 760 aaPredicted RBP18.76■□□□□ 0.59
BDNF-208ENST00000418212 ZNF316A6NFI3 1004 aaPredicted RBP18.7■□□□□ 0.58
BDNF-208ENST00000418212 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
BDNF-208ENST00000418212 BCANQ96GW7 911 aa18.67■□□□□ 0.58
BDNF-208ENST00000418212 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
BDNF-208ENST00000418212 MYO15BQ96JP2 1530 aa18.61■□□□□ 0.57
BDNF-208ENST00000418212 ANP32CO43423 234 aa18.6■□□□□ 0.57
BDNF-208ENST00000418212 CHIC2Q9UKJ5 165 aa18.56■□□□□ 0.56
BDNF-208ENST00000418212 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.56
BDNF-208ENST00000418212 DAXXQ9UER7 740 aaPredicted RBP18.51■□□□□ 0.55
BDNF-208ENST00000418212 DCAF1Q9Y4B6 1507 aa18.48■□□□□ 0.55
BDNF-208ENST00000418212 CLSPNQ9HAW4 1339 aa18.44■□□□□ 0.54
BDNF-208ENST00000418212 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
BDNF-208ENST00000418212 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
BDNF-208ENST00000418212 DDX10Q13206 875 aaKnown RBP18.42■□□□□ 0.54
BDNF-208ENST00000418212 CLIP1P30622 1438 aa18.4■□□□□ 0.54
BDNF-208ENST00000418212 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
BDNF-208ENST00000418212 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
BDNF-208ENST00000418212 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
BDNF-208ENST00000418212 CHGAP10645 457 aaKnown RBP18.35■□□□□ 0.53
BDNF-208ENST00000418212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.53
BDNF-208ENST00000418212 MTUS2Q5JR59 1369 aa18.33■□□□□ 0.52
BDNF-208ENST00000418212 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
BDNF-208ENST00000418212 BCL11AQ9H165 835 aa18.31■□□□□ 0.52
BDNF-208ENST00000418212 CEP162Q5TB80 1403 aa18.29■□□□□ 0.52
BDNF-208ENST00000418212 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
BDNF-208ENST00000418212 NACADO15069 1562 aa18.28■□□□□ 0.52
BDNF-208ENST00000418212 RRP7BPQ9NSQ0 103 aa18.28■□□□□ 0.52
BDNF-208ENST00000418212 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
BDNF-208ENST00000418212 KDM2AQ9Y2K7 1162 aa18.25■□□□□ 0.51
BDNF-208ENST00000418212 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
BDNF-208ENST00000418212 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
BDNF-208ENST00000418212 TSPY4P0CV99 314 aa18.23■□□□□ 0.51
BDNF-208ENST00000418212 TSPY10P0CW01 314 aa18.23■□□□□ 0.51
BDNF-208ENST00000418212 FAM9BQ8IZU0 186 aa18.22■□□□□ 0.51
BDNF-208ENST00000418212 SLC24A1O60721 1099 aa18.21■□□□□ 0.5
BDNF-208ENST00000418212 KCNH8Q96L42 1107 aa18.21■□□□□ 0.5
BDNF-208ENST00000418212 HNRNPUQ00839 825 aaKnown RBP eCLIP18.2■□□□□ 0.5
BDNF-208ENST00000418212 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
BDNF-208ENST00000418212 MIER1Q8N108 512 aa18.18■□□□□ 0.5
BDNF-208ENST00000418212 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
BDNF-208ENST00000418212 SOGA1O94964 1423 aa18.14■□□□□ 0.49
BDNF-208ENST00000418212 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
BDNF-208ENST00000418212 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
BDNF-208ENST00000418212 EEA1Q15075 1411 aa18.13■□□□□ 0.49
BDNF-208ENST00000418212 FKBP8Q14318 412 aa18.13■□□□□ 0.49
BDNF-208ENST00000418212 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
BDNF-208ENST00000418212 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
BDNF-208ENST00000418212 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
BDNF-208ENST00000418212 ANP32EQ9BTT0 268 aa18.1■□□□□ 0.49
BDNF-208ENST00000418212 TNIKQ9UKE5 1360 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms