Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 ABHD17AP4-201ENST00000411545 909 ntBASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 ECEL1P2-201ENST00000461596 1295 ntBASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERGIC3Q9Y282 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 AC090877.2-201ENST00000558441 1738 ntBASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ERGIC3Q9Y282 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ERGIC3Q9Y282 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
ERGIC3Q9Y282 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.27■□□□□ 0.83
ERGIC3Q9Y282 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ERGIC3Q9Y282 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ERGIC3Q9Y282 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ERGIC3Q9Y282 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.25■□□□□ 0.83
ERGIC3Q9Y282 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
ERGIC3Q9Y282 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ERGIC3Q9Y282 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERGIC3Q9Y282 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ERGIC3Q9Y282 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ERGIC3Q9Y282 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.24■□□□□ 0.83
ERGIC3Q9Y282 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERGIC3Q9Y282 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERGIC3Q9Y282 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERGIC3Q9Y282 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ERGIC3Q9Y282 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
ERGIC3Q9Y282 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERGIC3Q9Y282 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms