RNA–Protein interactions for RNA: ENST00000223459.10

ZNF688-201, Transcript of zinc finger protein 688, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF688, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF688-201ENST00000223459 NISCHQ9Y2I1 1504 aa42.78■■■■■ 4.44
ZNF688-201ENST00000223459 CCDC180Q9P1Z9 1646 aa36.85■■■■□ 3.49
ZNF688-201ENST00000223459 ZCCHC6Q5VYS8 1495 aaKnown RBP36.01■■■■□ 3.36
ZNF688-201ENST00000223459 SHROOM4Q9ULL8 1493 aa35.98■■■■□ 3.35
ZNF688-201ENST00000223459 DCAF8L2P0C7V8 631 aa35.6■■■■□ 3.29
ZNF688-201ENST00000223459 SUPT5HO00267 1087 aaKnown RBP35.45■■■■□ 3.27
ZNF688-201ENST00000223459 DCAF1Q9Y4B6 1507 aa35.18■■■■□ 3.22
ZNF688-201ENST00000223459 ABCC9O60706 1549 aa34.84■■■■□ 3.17
ZNF688-201ENST00000223459 MYO15BQ96JP2 1530 aa34.56■■■■□ 3.12
ZNF688-201ENST00000223459 CHIC1Q5VXU3 224 aa34.55■■■■□ 3.12
ZNF688-201ENST00000223459 NACADO15069 1562 aa34.3■■■■□ 3.08
ZNF688-201ENST00000223459 SCRIBQ14160 1630 aa34.28■■■■□ 3.08
ZNF688-201ENST00000223459 HRCP23327 699 aa34.12■■■■□ 3.05
ZNF688-201ENST00000223459 PCGF6Q9BYE7 350 aa33.95■■■■□ 3.03
ZNF688-201ENST00000223459 RB1CC1Q8TDY2 1594 aa33.93■■■■□ 3.02
ZNF688-201ENST00000223459 LOC105371045A0A1W2PR82 267 aa33.66■■■□□ 2.98
ZNF688-201ENST00000223459 PPARGC1BQ86YN6 1023 aaKnown RBP33.5■■■□□ 2.95
ZNF688-201ENST00000223459 RSF1Q96T23 1441 aaPredicted RBP33.47■■■□□ 2.95
ZNF688-201ENST00000223459 CECR2Q9BXF3 1484 aa33.38■■■□□ 2.93
ZNF688-201ENST00000223459 UNC13AQ9UPW8 1703 aa33.3■■■□□ 2.92
ZNF688-201ENST00000223459 MROH2BQ7Z745 1585 aa33.17■■■□□ 2.9
ZNF688-201ENST00000223459 TRIM26Q12899 539 aaPredicted RBP33.1■■■□□ 2.89
ZNF688-201ENST00000223459 PABPN1Q86U42 306 aaKnown RBP eCLIP33.1■■■□□ 2.89
ZNF688-201ENST00000223459 BICRAQ9NZM4 1560 aa32.99■■■□□ 2.87
ZNF688-201ENST00000223459 BAZ1AQ9NRL2 1556 aaPredicted RBP32.95■■■□□ 2.86
ZNF688-201ENST00000223459 WIZO95785 1651 aa32.91■■■□□ 2.86
ZNF688-201ENST00000223459 TRIM41Q8WV44 630 aa32.9■■■□□ 2.86
ZNF688-201ENST00000223459 FAM9AQ8IZU1 332 aaPredicted RBP32.78■■■□□ 2.84
ZNF688-201ENST00000223459 SMARCA4P51532 1647 aa32.76■■■□□ 2.84
ZNF688-201ENST00000223459 EHMT2Q96KQ7 1210 aa32.6■■■□□ 2.81
ZNF688-201ENST00000223459 ZEB1P37275 1124 aaPredicted RBP32.46■■■□□ 2.79
ZNF688-201ENST00000223459 TOP2AP11388 1531 aaKnown RBP32.46■■■□□ 2.79
ZNF688-201ENST00000223459 CCDC88BA6NC98 1476 aa32.27■■■□□ 2.76
ZNF688-201ENST00000223459 PEG3Q9GZU2 1588 aa32.24■■■□□ 2.75
ZNF688-201ENST00000223459 SMARCA2P51531 1590 aa32.22■■■□□ 2.75
ZNF688-201ENST00000223459 ATAD2BQ9ULI0 1458 aa32.17■■■□□ 2.74
ZNF688-201ENST00000223459 EIF4G1Q04637 1599 aaKnown RBP32.09■■■□□ 2.73
ZNF688-201ENST00000223459 BAZ1BQ9UIG0 1483 aaKnown RBP32.02■■■□□ 2.72
ZNF688-201ENST00000223459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.83■■■□□ 2.69
ZNF688-201ENST00000223459 ABCC8Q09428 1581 aa31.83■■■□□ 2.69
ZNF688-201ENST00000223459 NCAPD3P42695 1498 aa31.75■■■□□ 2.67
ZNF688-201ENST00000223459 SCAF1Q9H7N4 1312 aaKnown RBP31.73■■■□□ 2.67
ZNF688-201ENST00000223459 CCER1Q8TC90 406 aaPredicted RBP31.72■■■□□ 2.67
ZNF688-201ENST00000223459 HMGXB3Q12766 1538 aa31.66■■■□□ 2.66
ZNF688-201ENST00000223459 TTBK1Q5TCY1 1321 aaPredicted RBP31.63■■■□□ 2.65
ZNF688-201ENST00000223459 SOGA1O94964 1423 aa31.52■■■□□ 2.64
ZNF688-201ENST00000223459 CEP162Q5TB80 1403 aa31.5■■■□□ 2.63
ZNF688-201ENST00000223459 WRNQ14191 1432 aaPredicted RBP eCLIP31.49■■■□□ 2.63
ZNF688-201ENST00000223459 CC2D2AQ9P2K1 1620 aa31.4■■■□□ 2.62
ZNF688-201ENST00000223459 TNIKQ9UKE5 1360 aa31.38■■■□□ 2.61
ZNF688-201ENST00000223459 RUSC2Q8N2Y8 1516 aa31.37■■■□□ 2.61
ZNF688-201ENST00000223459 CSRNP3Q8WYN3 585 aa31.34■■■□□ 2.61
ZNF688-201ENST00000223459 UBTFP17480 764 aaKnown RBP31.32■■■□□ 2.6
ZNF688-201ENST00000223459 SYNJ1O43426 1573 aa31.32■■■□□ 2.6
ZNF688-201ENST00000223459 PELP1Q8IZL8 1130 aaKnown RBP31.31■■■□□ 2.6
ZNF688-201ENST00000223459 DIEXFQ68CQ4 756 aaKnown RBP31.29■■■□□ 2.6
ZNF688-201ENST00000223459 ACIN1Q9UKV3 1341 aaKnown RBP31.26■■■□□ 2.59
ZNF688-201ENST00000223459 EEA1Q15075 1411 aa31.24■■■□□ 2.59
ZNF688-201ENST00000223459 NEUROD1Q13562 356 aa31.24■■■□□ 2.59
ZNF688-201ENST00000223459 CFTRP13569 1480 aa31.21■■■□□ 2.59
ZNF688-201ENST00000223459 GOLGA3Q08378 1498 aa31.13■■■□□ 2.57
ZNF688-201ENST00000223459 TOP2BQ02880 1626 aa31.05■■■□□ 2.56
ZNF688-201ENST00000223459 CADPSQ9ULU8 1353 aa31.05■■■□□ 2.56
ZNF688-201ENST00000223459 CENPBP07199 599 aaPredicted RBP30.98■■■□□ 2.55
ZNF688-201ENST00000223459 GTF3C3Q9Y5Q9 886 aa30.96■■■□□ 2.55
ZNF688-201ENST00000223459 CUX1P39880 1505 aa30.95■■■□□ 2.55
ZNF688-201ENST00000223459 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.55
ZNF688-201ENST00000223459 ZNF316A6NFI3 1004 aaPredicted RBP30.93■■■□□ 2.54
ZNF688-201ENST00000223459 CEP164Q9UPV0 1460 aa30.9■■■□□ 2.54
ZNF688-201ENST00000223459 HNRNPUL2Q1KMD3 747 aaKnown RBP30.9■■■□□ 2.54
ZNF688-201ENST00000223459 PRDM2Q13029 1718 aa30.85■■■□□ 2.53
ZNF688-201ENST00000223459 CLIP1P30622 1438 aa30.84■■■□□ 2.53
ZNF688-201ENST00000223459 KIF21BO75037 1637 aa30.84■■■□□ 2.53
ZNF688-201ENST00000223459 DNAJC5BQ9UF47 199 aa30.82■■■□□ 2.52
ZNF688-201ENST00000223459 NESP48681 1621 aa30.75■■■□□ 2.51
ZNF688-201ENST00000223459 RANGAP1P46060 587 aaPredicted RBP30.74■■■□□ 2.51
ZNF688-201ENST00000223459 FANCD2Q9BXW9 1451 aa30.72■■■□□ 2.51
ZNF688-201ENST00000223459 VPS8Q8N3P4 1428 aa30.72■■■□□ 2.51
ZNF688-201ENST00000223459 RAPGEF2Q9Y4G8 1499 aa30.71■■■□□ 2.51
ZNF688-201ENST00000223459 YTHDC1Q96MU7 727 aaKnown RBP30.68■■■□□ 2.5
ZNF688-201ENST00000223459 APLP2Q06481 763 aa30.65■■■□□ 2.5
ZNF688-201ENST00000223459 KIF27Q86VH2 1401 aa30.6■■■□□ 2.49
ZNF688-201ENST00000223459 MIER1Q8N108 512 aa30.6■■■□□ 2.49
ZNF688-201ENST00000223459 FGD5Q6ZNL6 1462 aa30.56■■■□□ 2.48
ZNF688-201ENST00000223459 LAMC3Q9Y6N6 1575 aa30.52■■■□□ 2.48
ZNF688-201ENST00000223459 PRXQ9BXM0 1461 aa30.51■■■□□ 2.47
ZNF688-201ENST00000223459 CUX2O14529 1486 aa30.49■■■□□ 2.47
ZNF688-201ENST00000223459 DNMBPQ6XZF7 1577 aa30.42■■■□□ 2.46
ZNF688-201ENST00000223459 TOPBP1Q92547 1522 aa30.41■■■□□ 2.46
ZNF688-201ENST00000223459 ERICH3Q5RHP9 1530 aa30.4■■■□□ 2.46
ZNF688-201ENST00000223459 PDS5BQ9NTI5 1447 aa30.37■■■□□ 2.45
ZNF688-201ENST00000223459 IGF1RP08069 1367 aa30.35■■■□□ 2.45
ZNF688-201ENST00000223459 POLA1P09884 1462 aaPredicted RBP30.34■■■□□ 2.45
ZNF688-201ENST00000223459 RAD54L2Q9Y4B4 1467 aa30.34■■■□□ 2.45
ZNF688-201ENST00000223459 URB2Q14146 1524 aaKnown RBP30.32■■■□□ 2.44
ZNF688-201ENST00000223459 ARAP1Q96P48 1450 aa30.29■■■□□ 2.44
ZNF688-201ENST00000223459 KANK4Q5T7N3 995 aaPredicted RBP30.28■■■□□ 2.44
ZNF688-201ENST00000223459 DHX57Q6P158 1386 aaKnown RBP30.24■■■□□ 2.43
ZNF688-201ENST00000223459 KIF21AQ7Z4S6 1674 aa30.21■■■□□ 2.43
ZNF688-201ENST00000223459 ABCA10Q8WWZ4 1543 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms