Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 FMO6P-201ENST00000236166 1620 ntBASIC18.82■□□□□ 0.6
PMFBP1Q8TBY8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 AC005840.4-201ENST00000541242 2494 ntBASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 AC067750.1-201ENST00000608826 6545 ntBASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 KRT18P33-201ENST00000398525 1043 ntBASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 RPL29P2-201ENST00000488409 460 ntBASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 OR4A49P-201ENST00000527050 632 ntBASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 PHBP18-201ENST00000546648 813 ntBASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 PRR20FP-201ENST00000603320 180 ntBASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 AC020922.4-201ENST00000621389 339 ntBASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 GOLGA8VP-201ENST00000559009 1798 ntBASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC18.81■□□□□ 0.6
PMFBP1Q8TBY8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 HSD3BP1-201ENST00000286193 1111 ntBASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 HNRNPA3P12-201ENST00000437410 1063 ntBASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 AP000533.1-201ENST00000456143 1177 ntBASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 CCND3P2-201ENST00000579393 537 ntBASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 AC009041.4-201ENST00000620075 638 ntBASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 AC137723.2-201ENST00000623540 398 ntBASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 AC233280.19-201ENST00000633223 136 ntBASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PMFBP1Q8TBY8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 AC245140.2-201ENST00000624054 1939 ntBASIC18.79■□□□□ 0.6
PMFBP1Q8TBY8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms